mRNA_Ecto-sp13_S_contig8189.19538.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: D7G3J3_ECTSI (Conserved C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3J3_ECTSI) HSP 1 Score: 311 bits (797), Expect = 7.590e-101 Identity = 224/269 (83.27%), Postives = 226/269 (84.01%), Query Frame = 1
Query: 1 MPPTLTCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRRLAAALGSDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAAKRIAAVAKPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ 807
MP TLTCTACAV FSTS+AHK HYKLDWHRYNLRRKVAGLAPVDQG FDR LAAALG DAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEA KR SPTD XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXPMG CVCIFCD VSPSFEENCAHMLR HGFFIPDVEYLQDPEGL+AYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ
Sbjct: 1 MPSTLTCTACAVAFSTSEAHKAHYKLDWHRYNLRRKVAGLAPVDQGGFDRLLAAALGPDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAVKRAXXXXXXXXXXXSPTDGXXXXXXXXXXXXXXXXXXXXXXVLQKSGNGTRXXXXXXXXXXXXXXXXXXXXXGSPQKDAMSQXXXXXXXXXXXXXXXXPMGPCVCIFCDFVSPSFEENCAHMLRHHGFFIPDVEYLQDPEGLVAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ 269
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: A0A835YRS1_9STRA (C2H2 type zinc-finger-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS1_9STRA) HSP 1 Score: 187 bits (475), Expect = 8.250e-52 Identity = 163/273 (59.71%), Postives = 190/273 (69.60%), Query Frame = 1
Query: 16 TCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRRLAAALGSDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAAKRIAAVAKPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------PMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ 807
TCTACA TF +S+ + HYKLDWHRYNL+RKVA LAPV + DF+RRLAA G+ K+D++ C ECRKSF SE LY QHL++KKH++ +AA AK A TAASP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P+G+ +C+FC+ + +NCAHML HGFFIPD EYL D GL+AY EKVKLG +CL CNG+G+ F +RAVQQ
Sbjct: 103 TCTACASTFQSSEEQRAHYKLDWHRYNLKRKVASLAPVSKEDFERRLAAIAGAAVTKSDYRGHCKECRKSFGSEKLYAQHLETKKHQQV---VAANAKKAITAASPAAAAGGSEGPILQDTLEADMPAPEVSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPEPPLGAHICVFCNKEARDVADNCAHMLAAHGFFIPDAEYLVDRAGLVAYCGEKVKLGRLCLVCNGRGRGFRGWRAVQQ 372
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: T1IQQ3_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IQQ3_STRMM) HSP 1 Score: 137 bits (346), Expect = 6.800e-35 Identity = 96/266 (36.09%), Postives = 126/266 (47.37%), Query Frame = 1
Query: 16 TCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRRLAAALGSDA-PKADFQARCLECRKSFRSEGLYKQHLQSKKHKE-AAKRIAAVAKPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ 807
TC AC FS ++ H+ HYK DWHRYNL+RKVA L P+D+ +F++RL L A PKA+ + C C+K F S ++ HL+SKKH E AAK+ A+P T + + XXXXXX P+ C+FC S + EN HM +H FF+PDVEYL D EGLI Y+ EKV G +CL+CN KGK FHT ++VQ+
Sbjct: 4 TCVACQSRFSLAEKHRDHYKTDWHRYNLKRKVAELPPIDEKEFNQRLLTHLERKAEPKAEGISICNVCKKHFSSTLTFENHLKSKKHVELAAKKPKINAEPKKTLDTAENIEIDDXXXXXXEWEDLADEP------------------------------------------------------------PLTVDECLFCSFKSDNVIENLKHMTTEHSFFVPDVEYLADLEGLIKYLAEKVSCGNMCLWCNEKGKAFHTTKSVQR 209
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: A0A1Y1YP14_9FUNG (Uncharacterized protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YP14_9FUNG) HSP 1 Score: 135 bits (341), Expect = 7.340e-34 Identity = 87/267 (32.58%), Postives = 110/267 (41.20%), Query Frame = 1
Query: 7 PTLTCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRRLAAALGSDAPK-ADFQARCLECRKSFRSEGLYKQHLQSKKHKEAAKRIAAVAKPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQ 804
P TC AC V F T + + HY+ DWHRYNL+RKVA L P+ F ++ A A + A F+ C+ C+K+F SE Y H+QSKKHKE AK A A P C+FC S SFEEN HM + H FFIPD+EYL D +GL Y+ EK+ + ICLYCNGKG+T+ T AV+
Sbjct: 12 PLFTCLACHVAFRTLEHQRNHYRTDWHRYNLKRKVAELPPITAEVFAEKVLAQQAQTAQEGAAFKGECVACKKTFASENAYTNHIQSKKHKETE------AKFAKNPAKPKKVDSETPVEKELTIEQQLDRVTDETELLQLLDKKKEQAVRLTPED------------------------------------------CLFCTQKSQSFEENVDHMTKTHSFFIPDIEYLTDIQGLFKYLGEKISVANICLYCNGKGRTYRTLEAVR 230
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: A0A8H7UES7_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UES7_9FUNG) HSP 1 Score: 134 bits (337), Expect = 3.200e-33 Identity = 83/271 (30.63%), Postives = 114/271 (42.07%), Query Frame = 1
Query: 16 TCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRRLAAA-----LGSDAPKAD---FQARCLECRKSFRSEGLYKQHLQSKKHKEAAKRIAAVAKPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQ 804
TC AC V F + + + HY+ DWHRYNL+RKVA L P+ FD +L +D KA+ F C CRK+F ++G + H+QSKKHKEA + A ++P T D + C+FC S +FE++ AHM + H FFIPD+EYL D GLI Y+ EK+ +G +CLYCNGKG+ + AV+
Sbjct: 13 TCMACQVAFRSGEGQRNHYRSDWHRYNLKRKVADLPPITLAQFDSKLQGTSIELTTKTDEKKAEQEAFSGECEACRKTFGTQGSFNSHIQSKKHKEAVAKAA--SRPQKTVKETDDEKAATSTNLVVDENMSDGEVNEIIDKRISEAVR------------------------------------------------LAETDCLFCTHTSDTFEDSIAHMTKVHSFFIPDIEYLSDLRGLIKYLGEKISVGNVCLYCNGKGRAIRSLEAVR 233
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: A0A168MV26_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168MV26_ABSGL) HSP 1 Score: 134 bits (337), Expect = 3.260e-33 Identity = 84/267 (31.46%), Postives = 111/267 (41.57%), Query Frame = 1
Query: 16 TCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRRLAAALGSDAPKAD---FQARCLECRKSFRSEGLYKQHLQSKKHKEAAKRIAAVAKPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ 807
TC +C V F T+DA + HY+ DWHRYNL+RKVA L PVD F ++ A + + D F+ C CRKSF +E Y H+QSKKHKE + K + P C+FC S S E+N HM + H FFIPD+EYL D +GLI Y+ EK+ +G +CL+CNGKGK F + AV++
Sbjct: 13 TCISCKVAFGTADAQRLHYRSDWHRYNLKRKVAELPPVDLAQFQQKDQAQKAATQKQEDTPVFKGYCDACRKSFGTENQYNNHIQSKKHKETQAKYVPRPKKSVDEDQPDQQKQQSQEQQVVDMTFTEETTEDEILSKIDAKIKAAPRLTEHD--------------------------------------------CLFCSTTSDSLEDNMTHMTKVHSFFIPDIEYLVDLQGLIRYLGEKISVGNVCLFCNGKGKGFLSMDAVRK 235
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: K3WIE7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIE7_GLOUD) HSP 1 Score: 135 bits (339), Expect = 4.060e-33 Identity = 91/284 (32.04%), Postives = 115/284 (40.49%), Query Frame = 1
Query: 16 TCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRRLAA-------ALGSDAPKADFQAR-------------CLECRKSFRSEGLYKQHLQSKKHKEAAKRIAAVAKPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ 807
TCTAC + F++ D K H++ DWHRYNL+RKV L PV + FD R+ AL +D Q R C+ C K+F + Y HL SKKH K+ VA T D P+ CIFC + F+ N +HML++HGFFIPDVE+L D EGL+ Y+ EKVKLG CLYCNGKGKTF Y+ VQ+
Sbjct: 3 TCTACRLEFASFDEQKEHFRSDWHRYNLKRKVVELPPVSEEQFDFRMQKVLQDKQKALENDPKHKQMQKREEMKKSGVKTMTKCVACNKTFTTSNAYDNHLTSKKHLANIKKNPTVADVTETIQKKLDIVSLDGSTEDEDSSDSNNPATTMTDEEVAVSLEEYKKQI-----------------------------------------PLTKEDCIFCAHKAADFDANLSHMLKEHGFFIPDVEFLVDAEGLVDYLAEKVKLGNFCLYCNGKGKTFRNYQDVQK 245
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: A0A433QNK8_9FUNG (C2H2 type zinc-finger-domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QNK8_9FUNG) HSP 1 Score: 134 bits (336), Expect = 7.590e-33 Identity = 108/269 (40.15%), Postives = 137/269 (50.93%), Query Frame = 1
Query: 16 TCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRRLAAALGSD---APKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAAKRIAAVA--KPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ 807
TC AC V F T++ + HY+ DWHRYNL+RKVA L PV F +++ A D A K FQA C C K + +E + HLQSKKHKE ++ A +A + A++PT XXXXXXXXXXXXXXXXXXXXXX C+FC S +F+ N HM + H FFIPD+EYL D GLI Y+ EKV +G +CLYCNGKG+ + +AVQ+
Sbjct: 24 TCLACHVAFHTAENQRNHYRTDWHRYNLKRKVAELPPVSAEQFAQKILAQQAKDKEQAGKNSFQAECEVCSKVYSTENAHTNHLQSKKHKETEQKAAELAARRSLQQASAPTTPTPKDDASSIXXXXXXXXXXXXXXXXXXXXXXLSLIDKKIETSARLTDQD------------------------------------CLFCSARSATFDANMTHMTKAHSFFIPDLEYLVDLAGLIRYLGEKVSVGNVCLYCNGKGRGMRSLKAVQK 256
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: UPI001B887A3A (zinc finger protein 622-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B887A3A) HSP 1 Score: 133 bits (334), Expect = 9.130e-33 Identity = 83/264 (31.44%), Postives = 115/264 (43.56%), Query Frame = 1
Query: 19 CTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRR-LAAALGSDAPKADFQARCLECRKSFRSEGLYKQHLQSKKHKEAAKRIAAVAKPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ 807
C C V F+ ++ H++HYK DWHRYNL+R+VA +APV +F +R LA D + D + C C K F ++ Y+ H+QSKKHKEA K+ A + +G C+FC +S S EEN HM +H FFIPD E++ D EGLI Y+ EKV +G +CL+CN KGK+FH+ ++VQQ
Sbjct: 6 CITCWVAFADAELHRSHYKTDWHRYNLKRRVAEMAPVTAENFQQRVLAQRTLIDEEEKDTSSACAVCGKHFSTKSQYENHVQSKKHKEAEKKHQAKVE-----------------------REILQKNKKNKEEGLVGSGDPTSSDKNTVNTELKSKMDSVNEEKKKTAEEMEVEEDDGSDAESWDENELGIEECLFCSHISSSMEENVDHMTVKHSFFIPDAEFVSDLEGLITYLGEKVGVGRVCLWCNEKGKSFHSTKSVQQ 246
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Match: A0A197JZ34_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZ34_9FUNG) HSP 1 Score: 133 bits (335), Expect = 1.020e-32 Identity = 83/267 (31.09%), Postives = 111/267 (41.57%), Query Frame = 1
Query: 16 TCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRRLAAALGSDAPK---ADFQARCLECRKSFRSEGLYKQHLQSKKHKEAAKRIAAVAKPAGTAASPTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMGSCVCIFCDLVSPSFEENCAHMLRQHGFFIPDVEYLQDPEGLIAYVEEKVKLGFICLYCNGKGKTFHTYRAVQQ 807
TC AC V F T+D + HY+ DWHRYNL+RK+ L PV F +++ A DA AD + C CRKS+ S+ Y+ HL SKKHKE ++ A +P P C+FC + +FE N HM + HGFFIPD+EY+ D EGLI Y+ EKV +G ICL+CNGKG+ + AV++
Sbjct: 27 TCLACHVAFKTADIQREHYRSDWHRYNLKRKMVELPPVSADMFAQKVTAQKQKDADDQAAADDSSECKTCRKSYSSKNAYENHLASKKHKETEAKLKANPRPVAKVEKPVKSDVESITSKMTVDLSVTDETTQEELEEIMDKKIETAVRLELTD-------------------------------------------CLFCTEKAETFESNIEHMTKYHGFFIPDLEYIVDLEGLIKYLGEKVSVGNICLHCNGKGRQIKSLEAVRK 250 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8189.19538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8189.19538.1 >prot_Ecto-sp13_S_contig8189.19538.1 ID=prot_Ecto-sp13_S_contig8189.19538.1|Name=mRNA_Ecto-sp13_S_contig8189.19538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=269bp MPPTLTCTACAVTFSTSDAHKTHYKLDWHRYNLRRKVAGLAPVDQGDFDRback to top mRNA from alignment at Ecto-sp13_S_contig8189:55..2252- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8189.19538.1 ID=mRNA_Ecto-sp13_S_contig8189.19538.1|Name=mRNA_Ecto-sp13_S_contig8189.19538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2198bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8189:55..2252- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8189:55..2252- >mRNA_Ecto-sp13_S_contig8189.19538.1 ID=mRNA_Ecto-sp13_S_contig8189.19538.1|Name=mRNA_Ecto-sp13_S_contig8189.19538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=807bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8189:55..2252- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |