mRNA_Ecto-sp13_S_contig8180.19532.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: A0A6H5L3G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G2_9PHAE) HSP 1 Score: 1066 bits (2758), Expect = 0.000e+0 Identity = 588/640 (91.88%), Postives = 602/640 (94.06%), Query Frame = 1
Query: 19 CGDAQEQQQDRGRGAEMAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVSHEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNFVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRAIVPESVLLRHAAAAGAGSNVKRKREGNGRDDDGGVGVVEESGDSVGDGWRRQIDSTSNGDRSYDDSSITGNTKGGRWNPGPQQAEDACPCYCGRGHRGGSRGPPSDLSRVSQLVGGGGMERGCALGVDFVARATERSPGFLSVSGAFDLLDAATGCGDGRGSDGGLGLEALFVRDTRVAAEGRDTQQTTAGEAATVNSILGGPLVALPRRFEVAAALHRFPGVQFRSAAPVTPEDGRKETVPTEGVEAGEAT 1938
CG AQEQQQDRGRGAEMAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPF SPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALA+GVYDKVPGDGRELAVADPGAVTIRAEDGRPVS+VDISPFISSLPSAVA P VRAAPAGGVA XXXXXXXXXXXXXXX AEGGT ETN XXXXXXXXEGVTTERFSTGAASGSTSQAANV+EALEAGATALLLDEDTCAGNFMIRDSRMRAMVSHEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDN+VVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRA+VPESVL+R AAA GAGSNVKRKREG+GR DDGGVG+VEES SVGDGWRRQIDSTSNGDR D+S+I GN KGGRWNPG QAEDA PC CGRGHRGGSRGPP DLSRV QLVGGGGMERGCALGVDFVARATERSPGFLSVSGA DLLDAATGCG GRGSDGGLGLEALFVRDT VAAEGRDTQQ TA E+ T NSILG PLVALPRRFEVAAALHRFPGVQFRSAAPVTPED R+ETVPTEG++ GEAT
Sbjct: 197 CGXAQEQQQDRGRGAEMAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFHSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAMGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSSVDISPFISSLPSAVAVPPVRAAPAGGVAXXXXXXXXXXXXXXXXVGD-AEGGTVETN--XXXXXXXXXEGVTTERFSTGAASGSTSQAANVMEALEAGATALLLDEDTCAGNFMIRDSRMRAMVSHEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNYVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRAVVPESVLIRLAAAVGAGSNVKRKREGDGRGDDGGVGLVEESSGSVGDGWRRQIDSTSNGDRFCDESTIAGNAKGGRWNPGHPQAEDASPCCCGRGHRGGSRGPPVDLSRVGQLVGGGGMERGCALGVDFVARATERSPGFLSVSGALDLLDAATGCGGGRGSDGGLGLEALFVRDTGVAAEGRDTQQATAAESTTANSILGRPLVALPRRFEVAAALHRFPGVQFRSAAPVTPEDDREETVPTEGMKEGEAT 833
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: D7FWM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWM0_ECTSI) HSP 1 Score: 483 bits (1243), Expect = 1.290e-159 Identity = 291/301 (96.68%), Postives = 292/301 (97.01%), Query Frame = 1
Query: 43 QDRGRGAEMAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVSHEPITPFI 945
QDRGRGAEMAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLR EFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAP RAAP G XXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVSHEPITP +
Sbjct: 192 QDRGRGAEMAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRGEFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPPARAAPVGXXXXXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVSHEPITPVV 492
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: A0A7S2AK97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AK97_9STRA) HSP 1 Score: 297 bits (761), Expect = 5.590e-90 Identity = 168/340 (49.41%), Postives = 208/340 (61.18%), Query Frame = 1
Query: 145 AARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRG-VVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVSHEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNFVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWP 1161
A R++V SVE+Q LR + + GV FVADG +LPRRG D RP+ + G VPF SP SL + + G V+GM++ GVT+I GGG+HGKSTLLRALA GVY+KVPGDGRE V D A+T+RAEDGR V +VD+SPFI+SLPS + FST ASGSTSQAA V+EA+E GA L++DEDT A NFM RD RMRA+V+HEPITP +YRV+ LW LGVSS++V+GG GD+ DV D +L+D++ SDAT +A IS+ F G VQYAGRG HRLPWP
Sbjct: 13 ALRSYVRSVEEQDGLRSALREAGGVGFVADGAMLPRRGDDDPRPVYAASGVVPFESPPSLAKTLTIRSTGRAVRGMMISAGVTLIAGGGFHGKSTLLRALAAGVYNKVPGDGREFVVTDASAMTVRAEDGRVVRSVDVSPFITSLPS-------------------------------------------------------KSNLDPSNFSTTCASGSTSQAAAVIEAVELGAKTLIIDEDTSAANFMSRDGRMRALVTHEPITPLLYRVTGLWESLGVSSIVVIGGNGDWLDVADCVVLLDDYKASDATRQAAFISKTFSSGLVQYAGRGSAHRLPWP 297
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: A0A2T2W0Q9_9CYAN (ATPase n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A2T2W0Q9_9CYAN) HSP 1 Score: 285 bits (729), Expect = 9.540e-83 Identity = 176/383 (45.95%), Postives = 226/383 (59.01%), Query Frame = 1
Query: 58 GAEMAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVS--HEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNFVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRAIVPESV 1200
G + AEVL G V AL+ LDAA+ H+++VED LR ++ + VAFVADG +LPRR G D+RP+E AVPF SP+SLR PH G V GM VP+G+T+IVGGGYHGKSTLLRA+ GVY+ +PGDGR V DPGAV +RAEDGR ++ VDISPFI SLP +G +T++FST ASGSTSQAAN++E +EAGATALL+DEDT A NFMIRD RM+A+++ EPITPFI +V L+ + G+S+V+V+GG GDYFDV DT + +D+FV D TE+A +I+ R + G+ G PR I P S+
Sbjct: 143 GRQAAEVLCGAVP-ALVTRTLRYKALDAASLGHHIDTVEDAEALRSQLSTHNLVAFVADGAILPRRSGIDERPLEHQ--AVPFTSPDSLRVTLACPHAGKVTGMGVPQGITLIVGGGYHGKSTLLRAIEAGVYNHMPGDGRHQVVTDPGAVKVRAEDGRSIAGVDISPFIGSLP---------------------------------------------------------QGKSTQQFSTPNASGSTSQAANIIEVIEAGATALLVDEDTSATNFMIRDRRMQALIAKDREPITPFIDKVQQLYTDYGISTVLVMGGSGDYFDVADTVIAMDDFVPQDVTEQARAIAADIKTERDREGGQSF-------GTLTPRIIQPNSI 458
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: A0A7C3BAR6_9CHLR (ABC-ATPase domain-containing protein (Fragment) n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3BAR6_9CHLR) HSP 1 Score: 279 bits (714), Expect = 1.490e-80 Identity = 174/375 (46.40%), Postives = 217/375 (57.87%), Query Frame = 1
Query: 67 MAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVS--HEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNFVVSDATERAHSISRRFCVGRVQYAGR---GLVHRLPWPGDPQP 1176
+ E L IV+QALL P L H+ VED LR+ + A VAFVADG +LPRR G DDRPME RGAVPF SP+SLR LPH G + GM +PRGVT+IVGGGYHGKSTLL A+ GVY+ +PGDGRE V D AV +RAEDGR ++ VDISPFI++LP G+ T F+T ASGSTSQAAN++EALEAGA LL+DEDT A NFMIRD RM+ +++ HEPITPFI +V L+ + GVS+++V+GG GDYFDV DT + ++N+ DATERA I+R++ R G + R+P P P
Sbjct: 150 LCEDLPMIVEQALLARNQPREAL-----MEHLRVVEDADALRQQLDALGLVAFVADGAILPRRSGVDDRPME--RGAVPFESPDSLRVTVELPHAGRITGMGIPRGVTLIVGGGYHGKSTLLAAIERGVYNHIPGDGREFVVTDAAAVKVRAEDGRRIAGVDISPFIANLPF---------------------------------------------------------GIDTRSFTTDNASGSTSQAANIIEALEAGARVLLVDEDTAATNFMIRDHRMQELIAKEHEPITPFIDKVRLLYQDYGVSTILVMGGSGDYFDVADTVIAMENYRPWDATERAKEIARKYAAERRPEGGERFGSITPRIPLPDSLDP 460
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: UPI0002F3E1B6 (ABC-ATPase domain-containing protein n=1 Tax=Nodosilinea nodulosa TaxID=416001 RepID=UPI0002F3E1B6) HSP 1 Score: 279 bits (713), Expect = 1.920e-80 Identity = 168/380 (44.21%), Postives = 223/380 (58.68%), Query Frame = 1
Query: 67 MAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVS--HEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNFVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRAIVPESV 1200
+ + + +VK+ L+ LD + HV++VED LR +A VAFVADG +LPRR G D+RP++ A+PF+SP++LR R PH G V GM +P+G+T+IVGGGYHGKSTLLRA+ GVY+ VP DGR V DP AV +RAEDGR ++ V+ISPFI SLP +G +T+ FST ASGSTSQAAN++EA+EAGATALL+DEDT A NFMIRD RM+A+++ EPITPFI +V L+ + G+S+V+V+GG GDYFDV DT + +D FV D TERA SI+ ++ R + G P G PR + P+S+
Sbjct: 150 LCQAVPNLVKRTLVYEA-----LDRGKIQRHVDTVEDAEALRSQLADHSLVAFVADGAILPRRSGVDERPLQDQ--AIPFKSPDALRVTLRCPHAGEVSGMGIPQGITLIVGGGYHGKSTLLRAIEAGVYNHVPDDGRHQVVTDPAAVKVRAEDGRSIAGVNISPFIGSLP---------------------------------------------------------QGKSTQAFSTPNASGSTSQAANIIEAIEAGATALLVDEDTSATNFMIRDRRMQALIAKDREPITPFIDKVRQLYTDYGISTVLVMGGSGDYFDVADTVVAMDEFVPQDVTERARSIAAQYKTERDREGG-------PQFGSLTPRIVQPDSI 458
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: B4VMM2_9CYAN (Uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VMM2_9CYAN) HSP 1 Score: 279 bits (713), Expect = 2.070e-80 Identity = 170/383 (44.39%), Postives = 227/383 (59.27%), Query Frame = 1
Query: 61 AEM-AEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVSH--EPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNFVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRAIVPESV 1200
AEM E + IV QAL LDA + HVE++ED LR+ +A D VAF+AD +LPRR G DDRP++ + A+PF+SPE+LR F P+RG V GM +P G+T+IVGGGYHGKST+LR+L VGVY+ +PGDGREL V AV IRAEDGR +++VDISPFI+ LP +G +T +FST ASGSTSQAAN++EALEA LL+DEDT A NFMIRD RM+ +++ EPITPFI ++ L+ + GVS+++V+GG GDYFDV DT + +DNF D TE+A +I++++ R+ G+ G+ PR +PES+
Sbjct: 147 AEMLCEDIPEIVDQALKYE-----SLDAVEIKQHVETIEDADWLRQQLAERDLVAFIADDAILPRRSGVDDRPLD--KNALPFQSPETLRETFNCPNRGEVTGMGIPAGITLIVGGGYHGKSTVLRSLEVGVYNHIPGDGRELVVTQASAVKIRAEDGRSIASVDISPFINQLP---------------------------------------------------------QGRSTRQFSTANASGSTSQAANIIEALEANTQLLLVDEDTAATNFMIRDHRMQQLIAKDKEPITPFIDKIRQLYTDYGVSTIVVMGGSGDYFDVADTVIAMDNFQPYDVTEKARAIAKQYQTERIPEGGKEF-------GEIAPRIPLPESI 458
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: A0A8J7DSS2_9CYAN (ABC-ATPase domain-containing protein n=1 Tax=Nodosilinea sp. LEGE 07298 TaxID=2777970 RepID=A0A8J7DSS2_9CYAN) HSP 1 Score: 277 bits (709), Expect = 7.220e-80 Identity = 167/358 (46.65%), Postives = 215/358 (60.06%), Query Frame = 1
Query: 133 LDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVS--HEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNFVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRAIVPESV 1200
LDAA HV++ ED LR ++A + VAFVADG +LPRR G D+RP ++ AVPF+SP+SLR PH G V GM VP+G+T+IVGGGYHGKSTLLRA+ GVY+ VPGDGR V D AV +RAEDGR ++ VDISPFI SLP +G +T++FST ASGSTSQAAN++EA+EAGATALL+DEDT A NFMIRD RM+A+++ EPITPFI +V L+ + G+S+V+V+GG GDYFDV DT + +D FV + TE+A +I+ + R + G P G PR I P+S+
Sbjct: 167 LDAAKLERHVDTAEDAEVLRSQLSAHNLVAFVADGAILPRRSGVDERP--LTNQAVPFKSPDSLRATLTCPHAGDVTGMGVPQGITLIVGGGYHGKSTLLRAIETGVYNHVPGDGRHQVVTDRLAVKVRAEDGRSIAGVDISPFIGSLP---------------------------------------------------------QGKSTQKFSTPNASGSTSQAANIIEAIEAGATALLVDEDTSATNFMIRDRRMQALITKDREPITPFIDKVQQLYTDYGISTVLVMGGSGDYFDVADTVIALDEFVPQNVTEQAQAIAAEYRTERDREGG-------PTFGTLTPRTIQPDSI 458
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: A0A1U7IYW8_9CYAN (ATPase n=1 Tax=Phormidium tenue NIES-30 TaxID=549789 RepID=A0A1U7IYW8_9CYAN) HSP 1 Score: 277 bits (709), Expect = 9.750e-80 Identity = 165/358 (46.09%), Postives = 212/358 (59.22%), Query Frame = 1
Query: 133 LDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVS--HEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNFVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRAIVPESV 1200
LD A + H ++ ED LR ++A + VAFVADG +LPRR G D+RP+ AVPF +PESLR R PH G V GM +P G+T+IVGGGYHGKSTLLRA+ +GVY+ +PGDGR V D AV +RAEDGR ++ V+ISPFI SLP +G +T+ FST ASGSTSQAAN++EA+EAGATALL+DEDT A NFMIRD RM+A+++ EPITPFI +V L+ + G+S+V+V+GG GDYFDV DT + +D F D TERA +I+ F R + G+G G PR I P+S+
Sbjct: 167 LDGAQIQHHADTAEDAEALRSQLSAHNLVAFVADGAILPRRSGVDERPLVAQ--AVPFTAPESLRVTLRCPHAGAVTGMGIPAGITLIVGGGYHGKSTLLRAIEMGVYNHIPGDGRHQVVTDSAAVKVRAEDGRSIAGVNISPFIGSLP---------------------------------------------------------QGKSTQNFSTPNASGSTSQAANMIEAIEAGATALLVDEDTSATNFMIRDRRMQALIAKDREPITPFIDKVRQLYTDYGISTVLVMGGSGDYFDVSDTVIAMDEFCPQDVTERAKAIAVEFKTERDREGGQGF-------GSLTPRIIQPDSI 458
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Match: A0A7W1HMU4_9ACTN (ABC-ATPase domain-containing protein n=2 Tax=Rubrobacteraceae bacterium TaxID=2740537 RepID=A0A7W1HMU4_9ACTN) HSP 1 Score: 276 bits (707), Expect = 1.330e-79 Identity = 181/382 (47.38%), Postives = 216/382 (56.54%), Query Frame = 1
Query: 64 EMAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGVAFVADGCVLPRRGGSDDRPMEISRGAVPFRSPESLRREFRLPHRGVVKGMLVPRGVTVIVGGGYHGKSTLLRALAVGVYDKVPGDGRELAVADPGAVTIRAEDGRPVSAVDISPFISSLPSAVAAPSVRAAPAGGVASXXXXXXXXXXXXXXXXXXXAEGGTAETNGGSXXXXXXXXEGVTTERFSTGAASGSTSQAANVVEALEAGATALLLDEDTCAGNFMIRDSRMRAMVSHEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNFVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRAIVPESVLLR 1209
E+ EV RG + A P GG+D AR HVE+VED HLR L+ VAFVADG VLPR G+ DRP+E GA+PFRSPE R E LP++G+V GM VP GVT++ GGG+HGKSTLL AL+ GVYD VPGDGREL VA AV +RAEDGR VS VDIS I +LP G TTE FST ASGSTSQAAN+ EA+E G + LL+DEDT A NFMIRD RMR +V EPI+PFI V L LGVS+V+VVGG GDY DV D +L++++ SDAT R+ I+ +F R R + PQ RAI S+ LR
Sbjct: 149 ELPEVARGGLVPA------PEGGVDVERARLHVETVEDADHLRGLLPGLGLVAFVADGAVLPRESGASDRPLED--GALPFRSPEEYRVEVELPNKGLVSGMGVPEGVTLVAGGGFHGKSTLLSALSWGVYDHVPGDGRELVVARGDAVKVRAEDGRSVSGVDISAMIGALPG---------------------------------------------------------GRTTEDFSTPNASGSTSQAANIAEAIEVGTSLLLVDEDTSATNFMIRDERMRELVRREPISPFIDLVRPLHRSLGVSTVVVVGGVGDYLDVADRVILLEDYAPSDATPRSREITGKF-PPRAPLTDRDV-------RPPQGRAIDASSIDLR 457 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8180.19532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8180.19532.1 >prot_Ecto-sp13_S_contig8180.19532.1 ID=prot_Ecto-sp13_S_contig8180.19532.1|Name=mRNA_Ecto-sp13_S_contig8180.19532.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=625bp MAEVLRGIVKQALLGSVHPGGGLDAAAARAHVESVEDQRHLRRLVAASDGback to top mRNA from alignment at Ecto-sp13_S_contig8180:1265..7020- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8180.19532.1 ID=mRNA_Ecto-sp13_S_contig8180.19532.1|Name=mRNA_Ecto-sp13_S_contig8180.19532.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5756bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8180:1265..7020- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8180:1265..7020- >mRNA_Ecto-sp13_S_contig8180.19532.1 ID=mRNA_Ecto-sp13_S_contig8180.19532.1|Name=mRNA_Ecto-sp13_S_contig8180.19532.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1875bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8180:1265..7020- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |