mRNA_Ecto-sp13_S_contig818.19529.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5KF29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF29_9PHAE) HSP 1 Score: 1038 bits (2685), Expect = 0.000e+0 Identity = 646/798 (80.95%), Postives = 665/798 (83.33%), Query Frame = 1
Query: 202 ASPGEYCKVKHCGERPSYSDDGYEPAVRCRDHRKDGMLRVQHDRKTCGADGCTEEGDVHYMDRDGRIHRFCARHKEPVVVLEQAVQCE------------HGECDGTPQYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGIAFRKDHGPPRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSPAAEEVNTPPPGSKKRQTLHRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRRQRRRKLLKSTCKKERSVDGKRPTKKAKRETTGDVSTEAEXXXXXXXXXXXXXXXXXXXXXGKGSVVDGKGPTSSGXXQAXXXXXXXXXXXXXXXXXXXXXXXXXKTGRKGSAENLTPLPSSPRSASPSTTPPTVSATTASGNRLHMRTAPPVLALPDGAAGVPHREGADESPRAADGGGGSGGRR-ARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAPLSEE---GSGXXXXXXXXXXXSRGSDGGGDAFSAGEGSPSWRKLSPSDMLHAAQQXXXXXXXPAEAEARQRSLSTKDSGVKNGAVPTAGKKRERPSAPAGAPENGGSKPAKGDGGKPTGTPSQRRGKTSSSSGRTDNEKSSKRLRLSNGSGVGGGSRGGKGHDSAGKRRSPRVHEGEGEKGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARRCNIHKTPAAKGSSKPLPI 2547
ASPGEYC+VKHCGERPSYSDDGYEPAVRCRDHRKDGMLRVQHD KTCGADGC E DVHYM RDGRIHRFCARHKEPVVVLEQAVQCE HGECDGTP+YGGHDGPLTFCRAHKRAGMYTTRDG+LYVATRDGIAFRKD GPPRAT NGDREGVT TADAAATTTNGPETA P EEVNTPPPGSKK TLHRKLCEVPGCNVQPSFGAPGT KPRFCTGHKEEGHVSLKNRP XXXX HYGPSM XXXXXXXXXXXXXHLLKEA SLGKLQELDTQR QRRRKLLKSTCKKERS D K PTKKAKRETTG VSTE E GKGS+VDGKGPTSSG +AXXXXXXXXXXXXXXXXXXXXXXXX GRKGSAENL LP+SPRSASPSTTPP SATTASGNRLH+RTAPPVL LP GAAGVP REGAD++PRA ARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKE+RRAAKSAGLKLGEVIEATAAPLSEE XXXXXXXXXXXSRGSDGG DAFSAGEGS SWRKLS +D+ AAQQXXXXXXXPAEAEA+QRSLST+DSG K+GAVPTAGKKRERPSAPA +PENGGSKPAKGDGG+PT TPSQR GKTSSS+GRTDN KSSKRLRLSN SG GG RGGKGHDSAG RRSPR HEGEGE+GGKTGGGTVNGKVLCEIDTCYRPASYGIGDTAR CNIHKTPAAKGSSKPLPI
Sbjct: 26 ASPGEYCQVKHCGERPSYSDDGYEPAVRCRDHRKDGMLRVQHDHKTCGADGCNGEADVHYMGRDGRIHRFCARHKEPVVVLEQAVQCEVFHCCGFDGKDMHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGMLYVATRDGIAFRKDPGPPRATVNGDREGVTTTADAAATTTNGPETAXPXXXXXXXXXXXXXXXXXXXXXXXXXXEEVNTPPPGSKKGPTLHRKLCEVPGCNVQPSFGAPGTGKPRFCTGHKEEGHVSLKNRPCIFXXXXTRPHYGPSMXXXXXXXXXXXXXXXHLLKEAASLGKLQELDTQRGQRRRKLLKSTCKKERSADAKLPTKKAKRETTGGVSTEVEGRGQEIKKRKDKSDKGKGPARGKGSIVDGKGPTSSGGKKAXXXXXXXXXXXXXXXXXXXXXXXX--AGRKGSAENLIRLPASPRSASPSTTPPAGSATTASGNRLHLRTAPPVLVLPGGAAGVPQREGADDAPRAXXXXXXXXXXXXARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEKRRAAKSAGLKLGEVIEATAAPLSEEEXXXXXXXXXXXXXXXXSRGSDGGRDAFSAGEGSQSWRKLSQADIPCAAQQXXXXXXXPAEAEAKQRSLSTQDSGAKSGAVPTAGKKRERPSAPAASPENGGSKPAKGDGGEPTRTPSQRHGKTSSSNGRTDNMKSSKRLRLSNASGGGGSCRGGKGHDSAGIRRSPRGHEGEGERGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARLCNIHKTPAAKGSSKPLPI 821
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D8LH38_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH38_ECTSI) HSP 1 Score: 795 bits (2052), Expect = 2.590e-271 Identity = 509/722 (70.50%), Postives = 520/722 (72.02%), Query Frame = 1
Query: 337 TCGADGCTEEGDVHYMDRDGRIHRFCARHKEPVVVLEQAVQCEHGECDGTPQYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGIAFRKDHGPPRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSPAAEEVNTPPPGSKKRQTLHRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRRQRRRKLLKSTCKKERSVDGKRPTKKAKRETTGDVSTEAEXXXXXXXXXXXXXXXXXXXXXGKGSVVDGKGPTSSGXXQAXXXXXXXXXXXXXXXXXXXXXXXXXKTGRKGSAENLTPLPSSPRSASPSTTPPTVSATTASGNRLHMRTAPPVLALPDGAAGVPHREGADESPRAADGGGGSG-GRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAPLSEEGSGXXXXXXXXXXXS-RGSDGGGDAFSAGEGSPSWRKLSPSDMLHAAQQXXXXXXXPAEAEARQRSLSTKDSGVKNGAVPTAGKKRERPSAPAGAPENGGSKPAKGDGGKPTGTPSQRRGKTSSSSGRTDNEKSSKRLRLSNGSGVGGGSRGGKGHDSAGKRRSPRVHEGEGEKGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARRC 2496
T + CTEE DVHYM RDGRIHRFC RHKEPVVVLEQAVQC+HGECDGTP+YGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDG AFRKD GPPRAT NGDREG TA ADAAA TT GPETA+PATPSRGPKTD APTVL PS AAEEVNTPPPGSKK QTLHRKLCEVPGCNVQPSFGAPGT KPRFCTGHK+EGHVSLKNRP XXXX HYGPSM XXXXXXXXXXXXXHLLKEAESLGKLQELDTQRR RKLLKSTCKKERS D KRP KKAKRET GDVS E V+GKG KT +K + GVP REGADESPRAAD GRRARAPSRK LEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEAT PL EE XXXXXXXXXXX RGSDGGGDAFS GE SPSWRKLS S ML AAQQXXXXXXXPAEAEA+QRSLSTKDSG K+GAVPTAGKKRERPSAPA APENGGSKP KGDGG+ TDN KSSKRLRLSNGSG G GSRGGKGHDS GKRRSPR HEGEGE GGKTGGGTVNGKVLCEIDTCYRPASYGIGDTAR C
Sbjct: 41 TATSQQCTEEADVHYMGRDGRIHRFCTRHKEPVVVLEQAVQCQHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGSAFRKDPGPPRATVNGDREGATAAADAAAITTGGPETATPATPSRGPKTDAXXXXAPTVLSPSQAAEEVNTPPPGSKKGQTLHRKLCEVPGCNVQPSFGAPGTGKPRFCTGHKQEGHVSLKNRPCIFXXXXTRPHYGPSMXXXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRR---RKLLKSTCKKERSADAKRPNKKAKRETKGDVSPE----------------------------VEGKGQ---------------------------------KTKKKKDKSDK---------------------------------------------GVPQREGADESPRAADDXXXXXXGRRARAPSRKFLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATTVPLCEEXXXXXXXXXXXXXXXXRGSDGGGDAFSVGEASPSWRKLSLSGMLRAAQQXXXXXXXPAEAEAKQRSLSTKDSGTKSGAVPTAGKKRERPSAPAAAPENGGSKPPKGDGGEXXXXXXXXXXXXXXXXXXTDNGKSSKRLRLSNGSGGGXGSRGGKGHDSEGKRRSPRGHEGEGESGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARLC 653
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI) HSP 1 Score: 181 bits (459), Expect = 1.730e-43 Identity = 212/742 (28.57%), Postives = 291/742 (39.22%), Query Frame = 1
Query: 313 LRVQHDRKTCGADGCTEEGDVHYMDRDGRIHRFCARHKEPVVVLEQAVQCEHGECDGTPQYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGIAFRKDHGPPRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSPAAEEVNTPPPGSKKRQTLHRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRRQRRRKLLKSTCKKERSVDGKRPTKKAKRETTGDVSTEAEXXXXXXXXXXXXXXXXXXXXXGKGSVVDGKGPTSSGXXQAXXXXXXXXXXXXXXXXXXXXXXXXXKTGRKGSAENLTPLPSSPRSASPSTTPPTVSATTASGNRLHMRTAPPVLALPDGAAGVPHREGADESPRAADGGGGSGGRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAPL-----SEEGSGXXXXXXXXXXXSRGSDGGGDAFSAGEGSP----SWRKLSPSDMLHAAQQXXXXXXXPAEAEARQRSLS-TKDSGVKNGAVPTAGKKRERPSAPAGAPENGGSKPAKGDGGKPTGTPSQRRGKTSSSSGRTDNEKSSKRLRLSNGSGVGGGSRGGKGHDSAGKRRSPRVHEGEGEKGG----KTGGGTVNGKVLCEIDTCYRPASYGIGDTARRC 2496
L V+ +T G C + + +DG + + V + C+H C TP+YG +GPLT C++HKRAG+YT RDGVL VATRDG AFR+ G ++ N ++ G TAT AA R+ CE P C +QPS+G PGT++PRFC+ HKE+ VSLKNRP HYG SMGR HLLKEA++L K +EL K KR G+V + + S DG+ +G + X K K +N PS R+A S P+ + L A H E + GRRAR PSRK+LEASG++A E AQ +TK KKEE+ R+ + + QR+AA +AGLK+GEVIEATA+P EEG G GG + G GSP SWRKL+P+++L AA + +E +++ T D V GK+ E + P DGG G ++ +T +S +++ S N + + H SA E EKG + G T KV+CE+D+C R A +G+ R C
Sbjct: 135 LPVEDGPETRGLARCERGVEESRLPQDGGVISPPRTEDKKPAVASRTEYCKHTGCTRTPRYGRKNGPLTLCQSHKRAGLYTVRDGVLLVATRDGSAFREKAGSS-SSVNSNKNG-TATGAAA-------------------------------------------------------RRKCEAPDCTIQPSYGDPGTSRPRFCSSHKEKQMVSLKNRPCLFPGCDIRPHYGLSMGRAVYCVSHKKDGMVHLLKEAKNLEK-EEL-----------------------------KRKRRECGEVEEDLAD---------------------RDSGHDGE--EQAGSAEGSLQQRKRKKXKAKREGTKRSSGSHGKPTNKKKNKNTAASPSHLRTAGQSALAPSDD-----------------MRLLQSARQSAHEEASGS------------GRRARVPSRKVLEASGKMAGETAQWMTKEKKEEQARINKRFRAQRKAAAAAGLKIGEVIEATASPAPRAESEEEGLGS----------------GGTSIRGG-GSPVSKASWRKLTPTEILPAAGKKPSAEGAASEVRGNDAAMAETTDEQV-------VGKQPE-------------TAPVVSDGG---GRSERKPAETMASGAEMSSQEDSTTTNAFNEGSLKHHKKNQVEHSSA---------SSESEKGRYRVQQAGRQTSAVKVVCELDSCSRTAKFGVHGIVRYC 688
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D7G079_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G079_ECTSI) HSP 1 Score: 100 bits (248), Expect = 1.380e-20 Identity = 68/186 (36.56%), Postives = 84/186 (45.16%), Query Frame = 1
Query: 547 MYTTRDGVLYVATRDGIAFRKDHGP----PRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSPAAEEVNTPPPGSKKRQTLHRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGK 1092
MYT+RDG L +ATRDG A RK P P+A + P+ A PS GP+ D+R QT++RKLCEV GC VQPS+G GT++PRFC HK +G V LKNRP HYG S GR HLLKE+ ++ K
Sbjct: 1 MYTSRDGKLLMATRDGSAIRKAAAPRAVGPKAIPS------------KKVAKRAPKPEGAADPSAGPRPDLRV--------------------------QTMYRKLCEVEGCLVQPSYGLSGTSRPRFCREHKSKGMVGLKNRPCLFPGCTTRPHYGLSKGRAMYCASHKKDGMVHLLKESLNMEK 148
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5K6U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6U1_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 5.910e-14 Identity = 57/118 (48.31%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 1666 GRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAPLSEEGSGXXXXXXXXXXXSRGSDGGGDAFSAGEGSP---SWRKLSPSDMLHAA 2010
GRRARAPSRK LEASG++ E AQ +T+ KKEE+ RL ++KEQR+AA +AGLK GEVIEA A + GGD GE +P SWRKL+P+++L AA
Sbjct: 33 GRRARAPSRKFLEASGKIVGESAQWMTREKKEEQARLSLQLKEQRKAAAAAGLKPGEVIEAATAAGA----------------------GGDGI-RGENAPWNGSWRKLTPAEILQAA 127
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5KHQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ6_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 5.480e-12 Identity = 57/122 (46.72%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 1666 GRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAP---LSEEGSGXXXXXXXXXXXSRGSDGGGDAFSAGEGSP----SWRKLSPSDMLHAA 2010
GRRAR PSRK+LEA+G++ADE AQ +TK KKEE+ R+ ++ + QR+AA +AG K+GEVIEATA+P + E G G G G SP SWRKL+P+++L AA
Sbjct: 159 GRRARVPSRKVLEAAGKMADETAQWMTKEKKEEQARINKKFRAQRKAAVAAGPKIGEVIEATASPSPRVESEEDGL---------------GSGATSIRGGRSPVSNVSWRKLTPTEILLAA 265
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 2.980e-10 Identity = 127/489 (25.97%), Postives = 194/489 (39.67%), Query Frame = 1
Query: 436 VVLEQAVQCEHGECDGTPQYGGHDGPLTFCRAHKRAGMYTT-RDGVLYVATRDGIAFRKDHGPPRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSP-------AAEEVNTPPPGSKKRQTL---HRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRRQRRRKLLKSTCKKERSVDG----KRPTKKAKRETT---GDVSTEAEXXXXXXXXXXXXXXXXXXXXXGKGSVVDGKGPTSSGXXQAXXXXXXXXXXXXXXXXXXXXXXXXXKTGRKGSAENLTPLPSSPRSASPSTTPPTVSATTASGNRLHMRTAPPVLALPDGAAGVPHREGADESPRAADGGGGSGGRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEA 1848
+ + +A +CE+ C + +YG + P + C+AHKRAG YTT R G L +ATRDG AFR A VT A++ G E AS A P R T ++ P+ P + N P S + + + C PGC +P+ G PG A+ +C HK+ V L + H S+ A + GK K ++ KKER + G +R K+A+RE++ G+ T ++ G + D + + G + K K ++E P ++ P++ P A S L +R A RE A A+ GRR RAPSR+ LEASGR+ +GAQ +T+ KK E+ R+ E++++R+ ++ AGLK+G V+EA
Sbjct: 107 LPVPKAPRCEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPA------VTVPPSPASSEIAGTEAAS-ARPRRR-STGSSGSSVPSHRKPKENLSSSVHTLKRKNRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNN-----HEEKSV-----------------TSAAPTEGK-------------KKKQTQAKKEREMTGMTADQRGAKQARRESSIMEGNKGTTSKDDGGHR---------------GAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSDGMAP--SVEMLILRQA---------------REAAKTEAEAS-----GSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEA 515
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5KL62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL62_9PHAE) HSP 1 Score: 70.5 bits (171), Expect = 2.190e-9 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 280 VRCRDHRKDGMLRVQHDRKTCGADGCTEEGDVHYMDRDGRIHRFCARHKEPVVVLEQAVQCEHGECDGTPQYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDG 594
VR + +DG L V+ +T GC + + + +DG + + + V + C+H C +YG +GPL C++HKRAG+YT RDGVL VATRDG
Sbjct: 118 VRPPNGHEDG-LPVEDGPETRRLAGCERGVEENRLVQDGGVISPPRTEDKKLAVTSRTEYCKHAGCFRALRYGRKNGPLMLCQSHKRAGLYTVRDGVLLVATRDG 221
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 63.9 bits (154), Expect = 9.420e-7 Identity = 34/62 (54.84%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 1663 GGRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEA 1848
GGRRARAPSR+ LEASG++ +GAQ +T+ KK E+ R+ E++E+R+ ++ AGLK+G V+EA
Sbjct: 300 GGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEA 361
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 5.690e-6 Identity = 33/62 (53.23%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 1663 GGRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEA 1848
GGRRARAPSR+ LEASGR+ +GAQ +T+ K+ E+ R+ E++E+R+ ++ AGL +G V+EA
Sbjct: 400 GGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEA 461 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig818.19529.1 >prot_Ecto-sp13_S_contig818.19529.1 ID=prot_Ecto-sp13_S_contig818.19529.1|Name=mRNA_Ecto-sp13_S_contig818.19529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=850bp EEDQHQQQKQRKQQPPPRPKSQRQQLRLQQQQQQRPESQKQDQGSHPQRQback to top mRNA from alignment at Ecto-sp13_S_contig818:393..11738- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig818.19529.1 ID=mRNA_Ecto-sp13_S_contig818.19529.1|Name=mRNA_Ecto-sp13_S_contig818.19529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=11346bp|location=Sequence derived from alignment at Ecto-sp13_S_contig818:393..11738- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig818:393..11738- >mRNA_Ecto-sp13_S_contig818.19529.1 ID=mRNA_Ecto-sp13_S_contig818.19529.1|Name=mRNA_Ecto-sp13_S_contig818.19529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2550bp|location=Sequence derived from alignment at Ecto-sp13_S_contig818:393..11738- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |