mRNA_Ecto-sp13_S_contig818.19529.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig818.19529.1
Unique NamemRNA_Ecto-sp13_S_contig818.19529.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5KF29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF29_9PHAE)

HSP 1 Score: 1038 bits (2685), Expect = 0.000e+0
Identity = 646/798 (80.95%), Postives = 665/798 (83.33%), Query Frame = 1
Query:  202 ASPGEYCKVKHCGERPSYSDDGYEPAVRCRDHRKDGMLRVQHDRKTCGADGCTEEGDVHYMDRDGRIHRFCARHKEPVVVLEQAVQCE------------HGECDGTPQYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGIAFRKDHGPPRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSPAAEEVNTPPPGSKKRQTLHRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRRQRRRKLLKSTCKKERSVDGKRPTKKAKRETTGDVSTEAEXXXXXXXXXXXXXXXXXXXXXGKGSVVDGKGPTSSGXXQAXXXXXXXXXXXXXXXXXXXXXXXXXKTGRKGSAENLTPLPSSPRSASPSTTPPTVSATTASGNRLHMRTAPPVLALPDGAAGVPHREGADESPRAADGGGGSGGRR-ARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAPLSEE---GSGXXXXXXXXXXXSRGSDGGGDAFSAGEGSPSWRKLSPSDMLHAAQQXXXXXXXPAEAEARQRSLSTKDSGVKNGAVPTAGKKRERPSAPAGAPENGGSKPAKGDGGKPTGTPSQRRGKTSSSSGRTDNEKSSKRLRLSNGSGVGGGSRGGKGHDSAGKRRSPRVHEGEGEKGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARRCNIHKTPAAKGSSKPLPI 2547
            ASPGEYC+VKHCGERPSYSDDGYEPAVRCRDHRKDGMLRVQHD KTCGADGC  E DVHYM RDGRIHRFCARHKEPVVVLEQAVQCE            HGECDGTP+YGGHDGPLTFCRAHKRAGMYTTRDG+LYVATRDGIAFRKD GPPRAT NGDREGVT TADAAATTTNGPETA P                          EEVNTPPPGSKK  TLHRKLCEVPGCNVQPSFGAPGT KPRFCTGHKEEGHVSLKNRP   XXXX   HYGPSM  XXXXXXXXXXXXXHLLKEA SLGKLQELDTQR QRRRKLLKSTCKKERS D K PTKKAKRETTG VSTE E                     GKGS+VDGKGPTSSG  +AXXXXXXXXXXXXXXXXXXXXXXXX   GRKGSAENL  LP+SPRSASPSTTPP  SATTASGNRLH+RTAPPVL LP GAAGVP REGAD++PRA            ARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKE+RRAAKSAGLKLGEVIEATAAPLSEE      XXXXXXXXXXXSRGSDGG DAFSAGEGS SWRKLS +D+  AAQQXXXXXXXPAEAEA+QRSLST+DSG K+GAVPTAGKKRERPSAPA +PENGGSKPAKGDGG+PT TPSQR GKTSSS+GRTDN KSSKRLRLSN SG GG  RGGKGHDSAG RRSPR HEGEGE+GGKTGGGTVNGKVLCEIDTCYRPASYGIGDTAR CNIHKTPAAKGSSKPLPI
Sbjct:   26 ASPGEYCQVKHCGERPSYSDDGYEPAVRCRDHRKDGMLRVQHDHKTCGADGCNGEADVHYMGRDGRIHRFCARHKEPVVVLEQAVQCEVFHCCGFDGKDMHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGMLYVATRDGIAFRKDPGPPRATVNGDREGVTTTADAAATTTNGPETAXPXXXXXXXXXXXXXXXXXXXXXXXXXXEEVNTPPPGSKKGPTLHRKLCEVPGCNVQPSFGAPGTGKPRFCTGHKEEGHVSLKNRPCIFXXXXTRPHYGPSMXXXXXXXXXXXXXXXHLLKEAASLGKLQELDTQRGQRRRKLLKSTCKKERSADAKLPTKKAKRETTGGVSTEVEGRGQEIKKRKDKSDKGKGPARGKGSIVDGKGPTSSGGKKAXXXXXXXXXXXXXXXXXXXXXXXX--AGRKGSAENLIRLPASPRSASPSTTPPAGSATTASGNRLHLRTAPPVLVLPGGAAGVPQREGADDAPRAXXXXXXXXXXXXARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEKRRAAKSAGLKLGEVIEATAAPLSEEEXXXXXXXXXXXXXXXXSRGSDGGRDAFSAGEGSQSWRKLSQADIPCAAQQXXXXXXXPAEAEAKQRSLSTQDSGAKSGAVPTAGKKRERPSAPAASPENGGSKPAKGDGGEPTRTPSQRHGKTSSSNGRTDNMKSSKRLRLSNASGGGGSCRGGKGHDSAGIRRSPRGHEGEGERGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARLCNIHKTPAAKGSSKPLPI 821          
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D8LH38_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH38_ECTSI)

HSP 1 Score: 795 bits (2052), Expect = 2.590e-271
Identity = 509/722 (70.50%), Postives = 520/722 (72.02%), Query Frame = 1
Query:  337 TCGADGCTEEGDVHYMDRDGRIHRFCARHKEPVVVLEQAVQCEHGECDGTPQYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGIAFRKDHGPPRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSPAAEEVNTPPPGSKKRQTLHRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRRQRRRKLLKSTCKKERSVDGKRPTKKAKRETTGDVSTEAEXXXXXXXXXXXXXXXXXXXXXGKGSVVDGKGPTSSGXXQAXXXXXXXXXXXXXXXXXXXXXXXXXKTGRKGSAENLTPLPSSPRSASPSTTPPTVSATTASGNRLHMRTAPPVLALPDGAAGVPHREGADESPRAADGGGGSG-GRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAPLSEEGSGXXXXXXXXXXXS-RGSDGGGDAFSAGEGSPSWRKLSPSDMLHAAQQXXXXXXXPAEAEARQRSLSTKDSGVKNGAVPTAGKKRERPSAPAGAPENGGSKPAKGDGGKPTGTPSQRRGKTSSSSGRTDNEKSSKRLRLSNGSGVGGGSRGGKGHDSAGKRRSPRVHEGEGEKGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARRC 2496
            T  +  CTEE DVHYM RDGRIHRFC RHKEPVVVLEQAVQC+HGECDGTP+YGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDG AFRKD GPPRAT NGDREG TA ADAAA TT GPETA+PATPSRGPKTD     APTVL PS AAEEVNTPPPGSKK QTLHRKLCEVPGCNVQPSFGAPGT KPRFCTGHK+EGHVSLKNRP   XXXX   HYGPSM  XXXXXXXXXXXXXHLLKEAESLGKLQELDTQRR   RKLLKSTCKKERS D KRP KKAKRET GDVS E                            V+GKG                                  KT +K    +                                              GVP REGADESPRAAD       GRRARAPSRK LEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEAT  PL EE   XXXXXXXXXXX  RGSDGGGDAFS GE SPSWRKLS S ML AAQQXXXXXXXPAEAEA+QRSLSTKDSG K+GAVPTAGKKRERPSAPA APENGGSKP KGDGG+                  TDN KSSKRLRLSNGSG G GSRGGKGHDS GKRRSPR HEGEGE GGKTGGGTVNGKVLCEIDTCYRPASYGIGDTAR C
Sbjct:   41 TATSQQCTEEADVHYMGRDGRIHRFCTRHKEPVVVLEQAVQCQHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGSAFRKDPGPPRATVNGDREGATAAADAAAITTGGPETATPATPSRGPKTDAXXXXAPTVLSPSQAAEEVNTPPPGSKKGQTLHRKLCEVPGCNVQPSFGAPGTGKPRFCTGHKQEGHVSLKNRPCIFXXXXTRPHYGPSMXXXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRR---RKLLKSTCKKERSADAKRPNKKAKRETKGDVSPE----------------------------VEGKGQ---------------------------------KTKKKKDKSDK---------------------------------------------GVPQREGADESPRAADDXXXXXXGRRARAPSRKFLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATTVPLCEEXXXXXXXXXXXXXXXXRGSDGGGDAFSVGEASPSWRKLSLSGMLRAAQQXXXXXXXPAEAEAKQRSLSTKDSGTKSGAVPTAGKKRERPSAPAAAPENGGSKPPKGDGGEXXXXXXXXXXXXXXXXXXTDNGKSSKRLRLSNGSGGGXGSRGGKGHDSEGKRRSPRGHEGEGESGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARLC 653          
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.730e-43
Identity = 212/742 (28.57%), Postives = 291/742 (39.22%), Query Frame = 1
Query:  313 LRVQHDRKTCGADGCTEEGDVHYMDRDGRIHRFCARHKEPVVVLEQAVQCEHGECDGTPQYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGIAFRKDHGPPRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSPAAEEVNTPPPGSKKRQTLHRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRRQRRRKLLKSTCKKERSVDGKRPTKKAKRETTGDVSTEAEXXXXXXXXXXXXXXXXXXXXXGKGSVVDGKGPTSSGXXQAXXXXXXXXXXXXXXXXXXXXXXXXXKTGRKGSAENLTPLPSSPRSASPSTTPPTVSATTASGNRLHMRTAPPVLALPDGAAGVPHREGADESPRAADGGGGSGGRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAPL-----SEEGSGXXXXXXXXXXXSRGSDGGGDAFSAGEGSP----SWRKLSPSDMLHAAQQXXXXXXXPAEAEARQRSLS-TKDSGVKNGAVPTAGKKRERPSAPAGAPENGGSKPAKGDGGKPTGTPSQRRGKTSSSSGRTDNEKSSKRLRLSNGSGVGGGSRGGKGHDSAGKRRSPRVHEGEGEKGG----KTGGGTVNGKVLCEIDTCYRPASYGIGDTARRC 2496
            L V+   +T G   C    +   + +DG +        +   V  +   C+H  C  TP+YG  +GPLT C++HKRAG+YT RDGVL VATRDG AFR+  G   ++ N ++ G TAT  AA                                                       R+ CE P C +QPS+G PGT++PRFC+ HKE+  VSLKNRP          HYG SMGR             HLLKEA++L K +EL                             K KR   G+V  +                        + S  DG+    +G  +          X               K   K   +N    PS  R+A  S   P+                   + L   A    H E +              GRRAR PSRK+LEASG++A E AQ +TK KKEE+ R+ +  + QR+AA +AGLK+GEVIEATA+P       EEG G                 GG +   G GSP    SWRKL+P+++L AA +        +E      +++ T D  V        GK+ E             + P   DGG   G   ++  +T +S     +++ S      N   +    +    H SA           E EKG     + G  T   KV+CE+D+C R A +G+    R C
Sbjct:  135 LPVEDGPETRGLARCERGVEESRLPQDGGVISPPRTEDKKPAVASRTEYCKHTGCTRTPRYGRKNGPLTLCQSHKRAGLYTVRDGVLLVATRDGSAFREKAGSS-SSVNSNKNG-TATGAAA-------------------------------------------------------RRKCEAPDCTIQPSYGDPGTSRPRFCSSHKEKQMVSLKNRPCLFPGCDIRPHYGLSMGRAVYCVSHKKDGMVHLLKEAKNLEK-EEL-----------------------------KRKRRECGEVEEDLAD---------------------RDSGHDGE--EQAGSAEGSLQQRKRKKXKAKREGTKRSSGSHGKPTNKKKNKNTAASPSHLRTAGQSALAPSDD-----------------MRLLQSARQSAHEEASGS------------GRRARVPSRKVLEASGKMAGETAQWMTKEKKEEQARINKRFRAQRKAAAAAGLKIGEVIEATASPAPRAESEEEGLGS----------------GGTSIRGG-GSPVSKASWRKLTPTEILPAAGKKPSAEGAASEVRGNDAAMAETTDEQV-------VGKQPE-------------TAPVVSDGG---GRSERKPAETMASGAEMSSQEDSTTTNAFNEGSLKHHKKNQVEHSSA---------SSESEKGRYRVQQAGRQTSAVKVVCELDSCSRTAKFGVHGIVRYC 688          
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D7G079_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G079_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.380e-20
Identity = 68/186 (36.56%), Postives = 84/186 (45.16%), Query Frame = 1
Query:  547 MYTTRDGVLYVATRDGIAFRKDHGP----PRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSPAAEEVNTPPPGSKKRQTLHRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGK 1092
            MYT+RDG L +ATRDG A RK   P    P+A  +                   P+    A PS GP+ D+R                           QT++RKLCEV GC VQPS+G  GT++PRFC  HK +G V LKNRP          HYG S GR             HLLKE+ ++ K
Sbjct:    1 MYTSRDGKLLMATRDGSAIRKAAAPRAVGPKAIPS------------KKVAKRAPKPEGAADPSAGPRPDLRV--------------------------QTMYRKLCEVEGCLVQPSYGLSGTSRPRFCREHKSKGMVGLKNRPCLFPGCTTRPHYGLSKGRAMYCASHKKDGMVHLLKESLNMEK 148          
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5K6U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6U1_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 5.910e-14
Identity = 57/118 (48.31%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 1666 GRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAPLSEEGSGXXXXXXXXXXXSRGSDGGGDAFSAGEGSP---SWRKLSPSDMLHAA 2010
            GRRARAPSRK LEASG++  E AQ +T+ KKEE+ RL  ++KEQR+AA +AGLK GEVIEA  A  +                      GGD    GE +P   SWRKL+P+++L AA
Sbjct:   33 GRRARAPSRKFLEASGKIVGESAQWMTREKKEEQARLSLQLKEQRKAAAAAGLKPGEVIEAATAAGA----------------------GGDGI-RGENAPWNGSWRKLTPAEILQAA 127          
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5KHQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ6_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 5.480e-12
Identity = 57/122 (46.72%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 1666 GRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATAAP---LSEEGSGXXXXXXXXXXXSRGSDGGGDAFSAGEGSP----SWRKLSPSDMLHAA 2010
            GRRAR PSRK+LEA+G++ADE AQ +TK KKEE+ R+ ++ + QR+AA +AG K+GEVIEATA+P   +  E  G                G G     G  SP    SWRKL+P+++L AA
Sbjct:  159 GRRARVPSRKVLEAAGKMADETAQWMTKEKKEEQARINKKFRAQRKAAVAAGPKIGEVIEATASPSPRVESEEDGL---------------GSGATSIRGGRSPVSNVSWRKLTPTEILLAA 265          
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.980e-10
Identity = 127/489 (25.97%), Postives = 194/489 (39.67%), Query Frame = 1
Query:  436 VVLEQAVQCEHGECDGTPQYGGHDGPLTFCRAHKRAGMYTT-RDGVLYVATRDGIAFRKDHGPPRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVRQTAAPTVLPPSP-------AAEEVNTPPPGSKKRQTL---HRKLCEVPGCNVQPSFGAPGTAKPRFCTGHKEEGHVSLKNRPXXXXXXXXXXHYGPSMGRXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRRQRRRKLLKSTCKKERSVDG----KRPTKKAKRETT---GDVSTEAEXXXXXXXXXXXXXXXXXXXXXGKGSVVDGKGPTSSGXXQAXXXXXXXXXXXXXXXXXXXXXXXXXKTGRKGSAENLTPLPSSPRSASPSTTPPTVSATTASGNRLHMRTAPPVLALPDGAAGVPHREGADESPRAADGGGGSGGRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEA 1848
            + + +A +CE+  C  + +YG  + P + C+AHKRAG YTT R G L +ATRDG AFR         A      VT     A++   G E AS A P R   T    ++ P+   P           +  N P   S + +       + C  PGC  +P+ G PG A+  +C  HK+   V L +            H   S+                    A + GK             K  ++  KKER + G    +R  K+A+RE++   G+  T ++                     G   + D +   + G   +                         K   K ++E   P  ++     P++ P    A   S   L +R A               RE A     A+       GRR RAPSR+ LEASGR+  +GAQ +T+ KK E+ R+  E++++R+ ++ AGLK+G V+EA
Sbjct:  107 LPVPKAPRCEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPA------VTVPPSPASSEIAGTEAAS-ARPRRR-STGSSGSSVPSHRKPKENLSSSVHTLKRKNRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNN-----HEEKSV-----------------TSAAPTEGK-------------KKKQTQAKKEREMTGMTADQRGAKQARRESSIMEGNKGTTSKDDGGHR---------------GAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSDGMAP--SVEMLILRQA---------------REAAKTEAEAS-----GSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEA 515          
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: A0A6H5KL62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL62_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 2.190e-9
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 1
Query:  280 VRCRDHRKDGMLRVQHDRKTCGADGCTEEGDVHYMDRDGRIHRFCARHKEPVVVLEQAVQCEHGECDGTPQYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDG 594
            VR  +  +DG L V+   +T    GC    + + + +DG +        + + V  +   C+H  C    +YG  +GPL  C++HKRAG+YT RDGVL VATRDG
Sbjct:  118 VRPPNGHEDG-LPVEDGPETRRLAGCERGVEENRLVQDGGVISPPRTEDKKLAVTSRTEYCKHAGCFRALRYGRKNGPLMLCQSHKRAGLYTVRDGVLLVATRDG 221          
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 9.420e-7
Identity = 34/62 (54.84%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 1663 GGRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEA 1848
            GGRRARAPSR+ LEASG++  +GAQ +T+ KK E+ R+  E++E+R+ ++ AGLK+G V+EA
Sbjct:  300 GGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEA 361          
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 5.690e-6
Identity = 33/62 (53.23%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 1663 GGRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEA 1848
            GGRRARAPSR+ LEASGR+  +GAQ +T+ K+ E+ R+  E++E+R+ ++ AGL +G V+EA
Sbjct:  400 GGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEA 461          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig818.19529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KF29_9PHAE0.000e+080.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH38_ECTSI2.590e-27170.50EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G084_ECTSI1.730e-4328.57Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G079_ECTSI1.380e-2036.56EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5K6U1_9PHAE5.910e-1448.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KHQ6_9PHAE5.480e-1246.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLI4_9PHAE2.980e-1025.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL62_9PHAE2.190e-937.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH07_ECTSI9.420e-754.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LGW8_ECTSI5.690e-653.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig818contigEcto-sp13_S_contig818:393..11738 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size4135
Hectar predicted targeting categoryother localisation
Exons11
Ec32 ortholog descriptionEsV-1-7 domain protein
Ec32 orthologEc-24_000410.1
Cds size2550
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig818.19529.1prot_Ecto-sp13_S_contig818.19529.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig818 1977..11738 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464089.7689204-UTR-Ecto-sp13_S_contig818:392..19761681464089.7689204-UTR-Ecto-sp13_S_contig818:392..1976Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig818 393..1976 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464089.781308-CDS-Ecto-sp13_S_contig818:1976..20311681464089.781308-CDS-Ecto-sp13_S_contig818:1976..2031Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 1977..2031 -
1681464089.7955716-CDS-Ecto-sp13_S_contig818:2948..43341681464089.7955716-CDS-Ecto-sp13_S_contig818:2948..4334Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 2949..4334 -
1681464089.8145483-CDS-Ecto-sp13_S_contig818:4521..46501681464089.8145483-CDS-Ecto-sp13_S_contig818:4521..4650Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 4522..4650 -
1681464089.8267741-CDS-Ecto-sp13_S_contig818:5843..59251681464089.8267741-CDS-Ecto-sp13_S_contig818:5843..5925Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 5844..5925 -
1681464089.8375816-CDS-Ecto-sp13_S_contig818:6410..64731681464089.8375816-CDS-Ecto-sp13_S_contig818:6410..6473Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 6411..6473 -
1681464089.8476372-CDS-Ecto-sp13_S_contig818:7437..75781681464089.8476372-CDS-Ecto-sp13_S_contig818:7437..7578Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 7438..7578 -
1681464089.8581471-CDS-Ecto-sp13_S_contig818:8225..83211681464089.8581471-CDS-Ecto-sp13_S_contig818:8225..8321Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 8226..8321 -
1681464089.8722367-CDS-Ecto-sp13_S_contig818:8844..89771681464089.8722367-CDS-Ecto-sp13_S_contig818:8844..8977Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 8845..8977 -
1681464089.8870318-CDS-Ecto-sp13_S_contig818:9743..98551681464089.8870318-CDS-Ecto-sp13_S_contig818:9743..9855Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 9744..9855 -
1681464089.899242-CDS-Ecto-sp13_S_contig818:10561..107151681464089.899242-CDS-Ecto-sp13_S_contig818:10561..10715Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 10562..10715 -
1681464089.9100308-CDS-Ecto-sp13_S_contig818:11539..117381681464089.9100308-CDS-Ecto-sp13_S_contig818:11539..11738Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig818 11540..11738 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig818.19529.1

>prot_Ecto-sp13_S_contig818.19529.1 ID=prot_Ecto-sp13_S_contig818.19529.1|Name=mRNA_Ecto-sp13_S_contig818.19529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=850bp
EEDQHQQQKQRKQQPPPRPKSQRQQLRLQQQQQQRPESQKQDQGSHPQRQ
HQPQQQQQPPQRKSKKSASPGEYCKVKHCGERPSYSDDGYEPAVRCRDHR
KDGMLRVQHDRKTCGADGCTEEGDVHYMDRDGRIHRFCARHKEPVVVLEQ
AVQCEHGECDGTPQYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGIA
FRKDHGPPRATANGDREGVTATADAAATTTNGPETASPATPSRGPKTDVR
QTAAPTVLPPSPAAEEVNTPPPGSKKRQTLHRKLCEVPGCNVQPSFGAPG
TAKPRFCTGHKEEGHVSLKNRPCIFPGCNTRPHYGPSMGRPVFCATHKKK
SHVHLLKEAESLGKLQELDTQRRQRRRKLLKSTCKKERSVDGKRPTKKAK
RETTGDVSTEAEGKGPKTKKKKDKSEKGKAPARGKGSVVDGKGPTSSGGK
QAAEAAAAAAAAAAAAETTSSAAKNNKKTGRKGSAENLTPLPSSPRSASP
STTPPTVSATTASGNRLHMRTAPPVLALPDGAAGVPHREGADESPRAADG
GGGSGGRRARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEQR
RAAKSAGLKLGEVIEATAAPLSEEGSGSGGGGGGGGGGSRGSDGGGDAFS
AGEGSPSWRKLSPSDMLHAAQQQQQEEQQPAEAEARQRSLSTKDSGVKNG
AVPTAGKKRERPSAPAGAPENGGSKPAKGDGGKPTGTPSQRRGKTSSSSG
RTDNEKSSKRLRLSNGSGVGGGSRGGKGHDSAGKRRSPRVHEGEGEKGGK
TGGGTVNGKVLCEIDTCYRPASYGIGDTARRCNIHKTPAAKGSSKPLPI*
back to top

mRNA from alignment at Ecto-sp13_S_contig818:393..11738-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig818.19529.1 ID=mRNA_Ecto-sp13_S_contig818.19529.1|Name=mRNA_Ecto-sp13_S_contig818.19529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=11346bp|location=Sequence derived from alignment at Ecto-sp13_S_contig818:393..11738- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGAGGATCAGCACCAGCAACAGAAGCAGCGGAAGCAACAACCGCCGCC ACGGCCAAAGTCGCAGCGGCAACAGCTACGACTACAGCAACAGCAGCAGC AGCGACCAGAGTCACAGAAGCAAGACCAAGGATCACACCCCCAGCGGCAG CACCAACCACAACAACAGCAGCAACCACCGCAACGCAAGTCGAAGAAAAG TGAGCAGGAGTTTTTCCGCGACGATTTTTTGCTGGATTGCTTTGGTGTTG CTCTTGTTGTGGTGGTAGTTCTTGTTGAATAAAGTGATGGCGTCTAGCAA TAGACGACCGAGGGACGGGGGCGGTACCGCCGTTTATGCTGCCATTTTTG TCACCTGCGGTGAAACAGCTTTGTAGTTTTTTCCGTTCTAAGCTTTGTCA TTTCTGCTTGCTACGAGGGGTGTGGTGAAGCCATGCAGCCGTGTACAAAT CAGGATATTGGAGGAGGAGAAGGGGCTGGATTGCCATATTCCTCGAAAGC CCGAGTTGGGTGGCACCGCCATGGTGGCACTGCCTGCCGGCGCTGTGTTG CTGCCCTTTTCATGTGCCCGACGTCGCTATCATACCTACCATCGCCAGCT GTCGTACGTATGAGGGTTTAGCACATTTCGATGATCGCGTGGACGTCTGT TTATCGATAGACCGTTCGTCATCTGATGGTGGCCGTTTGAAGCCCCGGGC GCTTCGCGCTCGCCTGTCCGGCTTGAGTACCGATCGATAGGTGCCTAAGA ATCTCGAGGCCCCTCCTTTGCCCAGTGTGTCGCAATCGATGTCTGACTGT ATGGGGTTTCCCATGCCTTGTTTTGTCTCTATCCTTGAGGGATGGTACGA ATTGTGTGCTTGACCGCGGCTGTTAGCGCGGCAGGTGCCCGTCTTGTCGG AGCACGGTACAGGGGGACGCCTGGGTGGGTTGAGACAATGTCGCTCACGA TTCGACACTTTTCACCGCAATCTCCCTCCCTCGATCAACCGTTTACTTGG CTGACTGTTGGTTGCCTGGTCAGGTGCTAGCCCTGGAGAGTACTGCAAGG TCAAGCACTGCGGCGAACGCCCTTCGTATAGCGATGACGGCTACGAGCCA GCGGTGCGATGCCGGGATCACAGGAAAGACGGAATGCTGCGGGTTCAGCA CGACCGCAAGACCTGCGGAGCGGACGGGTGGGCTTCGGTTTTTGTTGCTG TTGTTGTTGCTGTTGTTGTTGCTGTTGTTGTTGCTGTTGTTGTTGCTGTT GTTGTTGCTGTTGTTGTTGCTGTTGTTGTTGTTGTTGGTGGTGGTGATTG TGGTGGTGGTGGTGGTGGCATTGGCATTGGTGTTGTTGTTGATATTGTTG TTGATAGTTTTGTAGTCTTCGTCGTCAATATTGTCTTATGGCCGTCGGCA TTGTTCGTTTTTCCGCTGCCTACGCCACTGGTGCTGTTGCTATTGCGGTT GTTGTTGCTACGTGGGCCATCCTATTGACTTTGGCAATCACGATCACCGT CGGCCATCCCGGCCGTAGTTGAAAACGTACACCTTTCACAAGGAACCCGT ACGATCCAGTGTTGCAATTTTCGATCTCCGCCTTCCCCACTTGCAAAGGT CGTGTACTTATTATTAATACCTCGTTCGCACAACCAAGTTTACCACCCGC GTGCACAACACCACAACGAAATTTCGCCACATATCCTTTTCCATCCCAGT CGAATACTGGACACGCTCTCTTTCCTCCCCCCTCCCGATGTTCGTATCTT TGGTGGTGCTACCTCGGAATCCACATTCCCGATCGAGATATGTCCCCTCC GCCCTATTTTGGGGTACCCTCAACGCCGACTCTTCTTGCCCCGGTACCAT TCGTTGGCCCCTGGGTGGAACCCCGTTCTACAGGTGCACCGAGGAGGGCG ACGTGCACTACATGGACCGGGATGGTCGGATCCACCGGTTCTGCGCTCGG CACAAAGAGCCGGTAGTCGTCTTGGAGCAGGCCGTGCAATGCGAGGTATT CCACTGCTGTGGCTTTGACGGTAAAGACATGGTACAGTTTTTGCGCTGCT GCTGCTGCTGCTGCTACTTTCCGGCCAGTTTCCGGTTGCTGTATGCAGGA GATGAGCGTTCACGAACTGAGCTGCCCTTTGTTTTTTTACCGTGAAAAGC CTGGACGGGTATGTCGTAGATGGAGATCGAAGCGGTGCGTCATCACACCT CTTGTGTCGTGTTTCTTTCCCACCTCCCTCACCTCCGTGATCAGTAGCAG CACCGATCAGGCTCAAACAAGTTTCGACGTTCTTTTTTGCACGATCTTAT TCATGTTGGGTCACCCGCGTTGTATGTTCTTGTTGGTTTTCTGCCTTGTC TCTGCCAACGGCAGTGTGACCCCCTCCCACGGGGGAGCCTCGTTTGTTTT GTCGATGTTGATCAGTATGTAGTTGAGTTTCAATCTTTTAAGTTGGTTGT TACCCAATGAGTTGAAACGTTTTTGGGCGATATAGTGCATGAAGTTAGGC ACAAATAGTGGGAAAACAGAAATGGGTGTCAATTGACATGGAGGAGTGTT CCGGTCGACGCCGTGCCGATGATGTTGCGATACCCGACCATCCCTCATAC GCCACGCGTCTGCTCCTAACACCACTCCGTTGCCGTGACCCCGGGGGGTT GTCGTTACCACCCGTATCCTGGTCGGTCTACGGTTAACGACTCGCGCCAT GCGGTCTGCTACCTACTTGGTCGATTTGAGCACGTTGATCTGATTGGTCT GTTTTCAACAGCACGGCGAATGCGACGGGACTCCGCAGTACGGGGGACAC GACGGGCCTCTCACCTTTTGCCGCGCGCACAAGCGAGCGGGCATGTACAC CACTCGTGACGGCGTGCTCTACGTGGCGACTCGGGATGGCATCGGTAAGG GGGGGGTAGGGTTCTTGGTTTTTTTCGGCGTTGGCGTCTTCAGATCAGCG AGTTCTCTTGCGGCATGCCCCGTTGTTCGTAGCATCAGGCGTGCTTGTCT TGCTCGCTCGCCGCGTCGTTGTTGAGTGCTTGTCGCGTTGTGCACGTGCT TCGGGAGCTCTTCCAACACTCCTGTATCGTTCATTTGCGCCTGTCAGAAT CCGCCTATGGTTCTGTTTGAGGTCAGAGAGAGGTGCTTCAGGCGGTTCAA GCACCCTCCCCCTTCCTTTCCCCCCCTGCCATGAGTATGTTCGCGGTACA CTCCAACAACCAAACACGTCCCACCTGCGAAAGAATGGACAGCTGCGAGC AAGAGCCCTTTGCAGAAACGCGGTTGTGGCTGATGTCCTTCCAAGGACTC CCGTTATGTGGCTGGCTCTCCGCTGCTTTTTAAAAGTTGAGCTGAGCTCT TGTATGACGATATTTCCCCCCCTGGCGACCGAACCCCGCTGTGCTTGTGC CGGTTCCCATCACACAGCCTTCAGGAAAGATCATGGGCCTCCACGTGCTA CCGCTAACGGCGACAGGGAGGGGGTGACCGCTACTGCAGACGCAGCAGCT ACCACCACAAACGGTGAGCCAGAGCCACATGAGGGTCTTGCAAAGTAGGG TGCTACTTGCCAATGTTTCGTACGGGTGTCGTGCACGGTTGGCATGACTC GTTTGGCAGCATCAAGGGGCCGTGTTGGTGCTCCGGGAGGAACGCGCAGT TCATCCAGACTTTGATTGTGGCTTTTGAAGCACAGCGACGTTCGTCCGTG TTTTCTTACAGTTTTAAACTACGCGCTTGAAGCAAGCGGCGTCAAATATG ACTCTTGAAGTATGAGCGGCGTAAGTTCGACACGCACGTCTCGGTATGCC CTTGTCCAACCTCCACCTCCACCGCCCCTTCCTCTGCAACACAGCACGTG TCACCCTTTTAAGAATCTCTTGCCTTGCGAGGCTGCTTTCTCGAGGGGAA ACCTAAAAGGGAGCGATTACACATGTAAAGCATGATGTCAAGTGTAGGCT TCTTGCTGAGCAGTTGTTCTGACGGTCACGTTCTTGCTCATCAATTTGTT TGAGCCTGCATTTCTGAACTCCAAACTTCTTAGGTGGGGGCGCGCGTTGT ATCCTTCGAACCCCCTCCGAACCCCCTCCCCTATCCCATTTCAGGGGTAC TCCGAACCCGCCGCTAAACTTCGATTTCCCGTGTCGCGCTGCCCTACTGT CGTTTTGCAGGGCCAGAGACCGCTTCCCCGGCTACTCCAAGCCGCGGCCC CAAGACAGATGTCAGGCAGACTGCAGCACCCACGGTGCTCCCTCCTTCTC CTGCTGCGGAAGAAGTCAACACTCCCCCACCAGGCTCGAAGAAGCGTCAA AGTGAGGAAATATCGAAATACCCCGCCCCAGATGTTTGGTAAGCCGTGAC TAGCCGGGATGCCAAATCGACCCACGGCATCACAGCACGCGCAAGGTTTG ATGGCCAGCTCCTGGTCCATCCTTGTGAAACGAAAGCCTGGGCCAAACCC CGGCACACGGCTCCGTCCCGGCATTGTAGGGATGCGAGGTCAATGGTCTA ACGATTACGGCATGCGTTTTCATGAGTACACCCCCCCCGCATGCCCTCCT CTGTGAAACCCAACTTTCGGCGTGTTCGCCGGTCAGCTTGAGAGTTCAAG TGAAGCCGCGGTGGTTGTGCTTGACACCCCCGGTGAATGTTGCGACGGTA GCTGTCGAAGGGGGTATAGGTACGGCGCGGTTGCCGCTAGTGCTAGTAGA AGCTGCCGCGCTGATGTTTGACTGCATGTCGTTCACCGTTCGTTTGCTAG TGATATTTTTTTAAGGATAGTGTCGTTGTTTTTGTTGTTGTTGTTCTGCT GCCGCGGTTCAGCGGGAGGGTATCAACGACTCTACAGACAACGCTGAATA TGGGCACGGATGAAATGGCACCACCAACCCACCCTCGTCAATTTTTCCTG TGTCAAGCACTGCCTACATCACCACACGTGCCTCTTTGCACACCGCTCAA CGCTGCTTCACTGATTTGTTGACGTTTCCTTTCCTTGCTGACCTCTTCTT CTCGTTTTCCGAGCATCGCTTCATGGACTTTGGCAGCTATCGACGGTATC ATTACCGGTCGACACAGAATCACCGTGTCCTTGTACCATGAATTGGACGT AACCTCTCTTTCAACACATACGAACGGACCACAATTTATTGGGTTCTAGC TTCCCGGGGGCGCAACCGTACCCCAGTGGTACTTTCTGAGCCTATTATAG TGGTGGCTTGATGGTGGCCCGTTCGATGACTTATCTCTCTTGCTTGTTCC GGACGGAAATGACAGCGCTCCACCGAAAGTTGTGCGAGGTTCCGGGGTGC AACGTTCAGCCCAGCTTCGGCGCTCCGGGTGCGTTTGCTTTTGATTGCTG TGTAAGCTGGGTAGCGATGTTGTGATGTTTGATCCTTGGCGCACGTTGGA GAGAGACGAACGAGGCAATATCTTTGTTCGCATTTTGCAGCAATCCACAG AGGGATAGACAGGGAAGTGATGTCACGGGCCTGTCGTCATGGCGTAGGTA ACCCGTGTTTTTTTTGCGGCTGGTGTACCTATTGCGGATCATTCAAAGCA AGGCTGTGTCGGGAACCAGAAATGACCTTTCAAGCGCATCGCCTCCACCC ACTGAGATGCGTGGCTCAATGCGATTCAACCCGCCCAAGAAGTGCGTGTC AACTCGCCCCGCCCTCCCCTCATTGACCAGCCTGGTCGATGGAAATCGGA CCTACTCTTCTCTGCGCATGTTTGGAATACAGTGAATCGTTGAAACCATA CCGCGACCCCGCGCGATCATGACTCCCACCCGCCCTCGCCCCGTCCCGTC CCATTCCACTTAGGCACCGCAAAGCCAAGGTTTTGCACGGGACACAAGGA GGAGGGACACGTGAGCCTCAAGAACCGCCCATGTATATTCCCGGGGTGAG TCTGTCGCTGATCCTACCATATCTGCGGTGCCCCTTGCACCGAGACTCCG GAGGCGCGTCTGAGCGACCACCCCCCTGTCTTGTCGTGTCGTTCTTTCAA GCTTGAACTTAGAATCCGCTGGCATCGCCTTACGGAGTGCCGGTAAGGCT GGCTCACACAGCCGTATTTCCCTTTGTTAGGGAAAGGGAGCCTGTGACCA CGGGAATCGACGGGTCACGTGTTTGATCAGTACGGACAGATAAATGGTAC TGGGTAGAGAGATCGGACGGTTATTGGTATTACAACAACAACACAAACGA CACAGCCGTATCGCAGCTGTGGTTGGGTTCAAGGGGGTTGATATAACCGT GCGAGTGCTGATGCGTGTGACATGTTGTGGCAGTAATCTCCAAGAGCTTG AGGCTTGTTGGGTGCCTCTGCATGGGTACAATCATAGATAGAAGGCGCAG CATGATGTGGTCTGGTCGCAGAGAGGTTTGGGCCTTGCGCTGCAAGTCTA GTTCAATATCCTCGGGCTGTTCGGAATGTCTGCATTGACCATATCATCAA GGACTGGGATGCTAGCGATGCGTTCCTCCTTATACCGTCGTTTAGCAGAA TGTGTGCATGTTACCAATAGAGAGAATGACCCTTGGAGAGACTCTCCCGT TTGAAGGGGTGTGTTGGAGTGTTTTCAGTGAGGGTTGAGAGCACGTGCTA CTTTTGTGCCAGCTTGTGTCAGAGGGCTTCGCGTCTGATCGGTCGGAGAC ATAGTTTAGGGGAGAGTTCAAACCGCTTTGTTGACCAGACAATAATAACC ACAGCAACAGCAGCAGCAAGACCGCACCCCGTCGCCACCACAGTAACAAC AGGTGTACCGTATATGACACAAGATAACACACCCCCTTGCCCGATTTTCA AAGCTTGATTACTCGACGACGAAGAGGATACGTAAACGAAATGATACATT TTCGAAAAGCTCTCACGAGACGGTTCCAACGCCGCCGTTTTCGGCGCTGT GAGTCTTCCTGCTGCTGAGAAATCGAGCTTTGAAAATCGGTCAAGGGGGT GTGTTATCTTGTGTCAAATACGGTAGGCGTACATGACCGCCTAAAGTTGA AACAAGACACCGGCAACGTGCGTTTTCCATCTTCTTGGCATTGCTGCCCT CAGCGCGTTTTTTCGACGGACCTACCGAACAACTGCAGGTGCAACACCAG ACCACACTACGGCCCTTCGATGGGCCGTCCGGTGTTTTGCGCCACCCACA AGAAGAAGTCCCACGTGCACCTGTTGAAGGAGGCCGAGAGCTTGGGGAAG CTGCAGGAGCTTGACACGTGAGCCGGGCTGTGTAGGTTGTGGTGCTGGCG GCAGTGATACCAACCTCCGCCCCACAGAGATGTTTTTTCCTCCACGAACT TATGTTTCATCTCGAGCTGTGAGAAAGACTGAGTAGTGGCCTTGTGGTTG ACGCAAAGCCTGAACCCTAGTCTTGACGCAACAACGCCCCCCGGCCCCTC TCAGCCAGCGCAGACAACGCCGCCGTAAGTTGCTCAAAAGCACTTGCAAG AAGGAACGCTCCGTCGATGGCAAGCGTCCAACAAAAAAGGCCAAACGCGA GACGACGGGTGACGTTTCGACGGAGGCGGAAGGAAAAGGCCCGAAGACCA AGAAAAAAAAGGACAAATCGGAGAAGGGTAAGGCGCCAGCGAGAGGGAAG GGCTCTGTCGTTGACGGCAAAGGGCCCACGTCTTCTGGGGGGAAACAAGC AGCAGAGGCTGCTGCTGCTGCTGCTGCTGCTGCCGCAGCAGCCGAAACTA CGTCGTCTGCTGCAAAGAACAACAAGAAGACGGGGCGCAAGGGTTCCGCC GAGAATCTCACCCCTTTACCGTCATCGCCACGGTCAGCTTCGCCGTCGAC TACACCGCCCACGGTTTCAGCGACGACCGCATCAGGTAACCGACTTCACA TGCGAACGGCGCCTCCGGTGTTGGCCCTGCCCGATGGCGCGGCGGGGGTG CCTCACAGGGAAGGCGCGGATGAGTCCCCTCGAGCGGCGGACGGCGGCGG CGGCTCCGGCGGTCGCAGGGCCCGCGCCCCGTCGCGGAAGCTCCTCGAGG CCTCGGGAAGAGTGGCCGACGAGGGGGCACAGCTGCTGACCAAGGCCAAG AAGGAGGAGGAGAACAGGCTCAAGAGGGAGATGAAGGAGCAGCGGAGGGC TGCCAAGTCGGCGGGGCTCAAGCTCGGGGAGGTCATCGAGGCCACCGCCG CCCCGCTGTCCGAGGAGGGGTCCGGGAGCGGGGGCGGCGGCGGCGGCGGC GGCGGCGGGAGCCGGGGTAGCGACGGGGGTGGCGACGCGTTTAGCGCCGG CGAAGGGTCGCCATCGTGGAGGAAGCTGAGCCCGTCGGACATGCTGCACG CAGCCCAACAGCAGCAGCAAGAAGAACAACAACCTGCGGAAGCGGAAGCT AGGCAACGATCCTTGTCCACGAAGGACTCTGGCGTCAAGAACGGAGCAGT GCCGACCGCGGGCAAGAAGCGGGAGAGGCCGAGTGCGCCGGCCGGTGCCC CGGAGAACGGCGGCAGCAAGCCGGCGAAAGGGGACGGTGGCAAGCCGACT GGCACACCCAGCCAAAGGCGCGGCAAGACCAGCAGCAGCAGCGGAAGAAC CGACAACGAAAAGAGCTCCAAGCGCCTCCGGCTGTCGAACGGAAGTGGTG TTGGCGGCGGTAGCCGTGGCGGAAAGGGTCACGACAGCGCGGGGAAACGG CGAAGCCCCCGGGTACACGAGGGCGAGGGGGAGAAGGGTGGCAAAACGGG AGGGGGAACGGTCAACGGCAAGGTCTTGTGCGAGATCGACACCTGCTACA GGCCGGCTTCGTACGGGATAGGCGACACTGCGCGCCGTTGGTGAGAGACC AGGCGTGTCCACTCTTGTCCCGAATATTTTTCGCAGAAAGGGCTTGTGCA GCGGCTCTCGCCTGGTTGTTGTTTTCGGCCTGGACTTCTTCTTTCTTGGT ACATCTGCTGCATTTGAAACGGCAGTAATGGCTGTTTGACTTGGGTACAG GTTTCCCGTAGCTGGTGCATGATTTAAAGCCAAAGAACAGCACCGTCTGA ACACTTTTGCTCTTTCTTAAAATCGCTCAGTCAACTTCCACGAGTTGGAA CATCTCGCTTGCCAAGAACCACACACAAGTGGTGCAAGAGGTATCTTTGT CAAGTTTCTACCATTGTCATGCATGCTGTCCGACGGAAAAGCGATACTTG TTCTTACGCGTGGTGTCACTACTGTAGGGTGTTCAACACAGCCACTCTAG GTTGACGGCACGGCGATTGTTGTTGTCCCAGAACAACGAGTTTGTGGGAG AGACGAGCTGAAGAGCTTCACGTTTTTCCTTTTTTTCCCTACGATGATGG CCACCGCTGTGACTTCTGCTCGCCTTCATGGTATCCCTCAAAGTTATTCT TCAGTAGTTTTGCGCGCTCTTCGCAGTTGCACGGTCCCGAGTCGCTCGCA ATGATCTAGAGGATGTCTGAAACAATCATCCACGCGTTGCGTTCCAGTTG AATTCCAGTTGAAAGCAAGAATGATGCCGACAAGATAACGCTTCACGGGC AGTGTTCCATCGCTACCAAAATGCTGTCATGCTCAGTGAAAGAGTGGCCT GCGCGTTCCAAAGGCCGGTTATCTCGCGCCTCCACTATCCACAATGATCG CTCCTTCAACCCCGGCCTTGAGTCAACCCCCCGGACAGTCGCCACTTGAT CACTCGTACGTGCGTCCGTCTGTCTGTCTGCCTGCCTCTTTTCGTCGGTA CTGCCAGCAACATACACAAGACCCCCGCTGCTAAGGGCAGCAGCAAGCCC CTGCCTATCTGATGGGCGGCCTTGTACCCGCCTGGTGTTGTGAGGGAACT CAAACCGCGGAGAGGGACAAGAGCCAGGGTCAGCGTGATAGTCCGAGAGA TTTTTGACCCATGGTCGAGAACCGCATCCTGGATGCGGCATTCCGTCTCC AAATCTACGAAGCTTTCGGCAACGAGCCCCCTGAACTCGTTTCCGACTCG ACGCTTTTGGGGCAAGGGCACACAGTGCTGAGACTTAATTGTCTCCACCT ATATTCACTTCTCCTTCATTCGACGGGTCCCGCAATAATTACCGCACCAA GCCCGTTGAGTTTGTTCCATCCTCTACACTTTATGTATGGCCTGCCGTAC GGTGTCGTTCGTCGTGCCGTTGCTGTAGCGGTTATCACAGAAAGGTACAT AGCATTTGAGAGCAGAGGGGCGCGTGGTTCCAGTTCGTCGTTCGCAGCAG CTCACAACCGCGTGCATTGCTGCCTACAGTGGGTGCTATCGCGAGCTCCC ACTCGCCGCGCTGTGCGGCGCGCGGGTGCCGTAGTCCTGCCCGTTTATTG TGCAGATTGAACCACACGGGCGGCAAAGTTTGCACTTGCGCTCTTTCTCG TACAGATGCGACGTGGCTGGGACTACGACGTAAGCTTTGCGGCAAGGGTC ACGCGTAGTGTACCGTAGCGTGGCTCCAGTACTACTCGTGGTAAGTCGCA AAAAGTGCCGATCCAATTGCTCAGATGTACGGAGCACGGGCACAACTAGC TGTCGACATGGCCGCTGTCGAAGGTGGTGCGCAGGTGGGGCCGATACTGA AAGCTACAAGCGAGACGGTTCCGTGAAGGCGGTTGGGGCATGTTCGTGCA AGTCCTAGGCGCTAAACAAGTCTTGTGGTCCTGTTGGGTGTTTATTTCAC TCGGTCTCCTTCATCTGTTGGGTTGATGCTGGCTGCTTCTTCTCATCGTC GAGTGGGATGTCTGTTGAGCGCAGCAGGTTTGTACGTGTGGTGGTGTTGA TGGAGTTGGGGCCATAAGAGGATCATGCCCAACGGCCGTCTGTGGTAGAG GTCGTGGTGTTTTTTTGTCTGTGCTACTGTTTTGGATTAGCTTAGTATAC AGCACGAAATGACATGCCGACCTCAAATGTTCGGTTTTGGTGCTGCTTGT GTTGTCTGCCCCTGGCTTGCGTGCGTTCTATGAATGGTCGTCTGGGAACG GAATGGTGTGTAATTACTTTTGCTTTATGCATATAATCGATACTGTCTCA GGCGCACCGTAAACAATAAAAAAAATAGAGCATAGCAACTCGGTAAGCGT GTGGTATGCATATAAATTTAGAGTGCATGTGCATTGGATAAACCCTGAGA TTGTAGGAGAACAAAATGCTCGCCGTAGGTGGCTTCGTTTGGGCGTTTTT GTTTCGGAGGGTATCATAAGCTAACTTCAAAGACGGTCCAGATGGGCTGT GGTTGTTTGTGCGATGAACACTGAAAATATTGATTTATTGTTTCGTATGT ACGCACTTTATCTCAAACGGTCTCGCTCTCCGGTCGAGTAGAGTAGATAG AGTAGAGTAGAGTAGAGAAGCAAACGCAAAAATCATTCCACTGCAC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig818:393..11738-

>mRNA_Ecto-sp13_S_contig818.19529.1 ID=mRNA_Ecto-sp13_S_contig818.19529.1|Name=mRNA_Ecto-sp13_S_contig818.19529.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2550bp|location=Sequence derived from alignment at Ecto-sp13_S_contig818:393..11738- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGAGGATCAGCACCAGCAACAGAAGCAGCGGAAGCAACAACCGCCGCC
ACGGCCAAAGTCGCAGCGGCAACAGCTACGACTACAGCAACAGCAGCAGC
AGCGACCAGAGTCACAGAAGCAAGACCAAGGATCACACCCCCAGCGGCAG
CACCAACCACAACAACAGCAGCAACCACCGCAACGCAAGTCGAAGAAAAG
TGCTAGCCCTGGAGAGTACTGCAAGGTCAAGCACTGCGGCGAACGCCCTT
CGTATAGCGATGACGGCTACGAGCCAGCGGTGCGATGCCGGGATCACAGG
AAAGACGGAATGCTGCGGGTTCAGCACGACCGCAAGACCTGCGGAGCGGA
CGGGTGCACCGAGGAGGGCGACGTGCACTACATGGACCGGGATGGTCGGA
TCCACCGGTTCTGCGCTCGGCACAAAGAGCCGGTAGTCGTCTTGGAGCAG
GCCGTGCAATGCGAGCACGGCGAATGCGACGGGACTCCGCAGTACGGGGG
ACACGACGGGCCTCTCACCTTTTGCCGCGCGCACAAGCGAGCGGGCATGT
ACACCACTCGTGACGGCGTGCTCTACGTGGCGACTCGGGATGGCATCGCC
TTCAGGAAAGATCATGGGCCTCCACGTGCTACCGCTAACGGCGACAGGGA
GGGGGTGACCGCTACTGCAGACGCAGCAGCTACCACCACAAACGGGCCAG
AGACCGCTTCCCCGGCTACTCCAAGCCGCGGCCCCAAGACAGATGTCAGG
CAGACTGCAGCACCCACGGTGCTCCCTCCTTCTCCTGCTGCGGAAGAAGT
CAACACTCCCCCACCAGGCTCGAAGAAGCGTCAAACGCTCCACCGAAAGT
TGTGCGAGGTTCCGGGGTGCAACGTTCAGCCCAGCTTCGGCGCTCCGGGC
ACCGCAAAGCCAAGGTTTTGCACGGGACACAAGGAGGAGGGACACGTGAG
CCTCAAGAACCGCCCATGTATATTCCCGGGGTGCAACACCAGACCACACT
ACGGCCCTTCGATGGGCCGTCCGGTGTTTTGCGCCACCCACAAGAAGAAG
TCCCACGTGCACCTGTTGAAGGAGGCCGAGAGCTTGGGGAAGCTGCAGGA
GCTTGACACCCAGCGCAGACAACGCCGCCGTAAGTTGCTCAAAAGCACTT
GCAAGAAGGAACGCTCCGTCGATGGCAAGCGTCCAACAAAAAAGGCCAAA
CGCGAGACGACGGGTGACGTTTCGACGGAGGCGGAAGGAAAAGGCCCGAA
GACCAAGAAAAAAAAGGACAAATCGGAGAAGGGTAAGGCGCCAGCGAGAG
GGAAGGGCTCTGTCGTTGACGGCAAAGGGCCCACGTCTTCTGGGGGGAAA
CAAGCAGCAGAGGCTGCTGCTGCTGCTGCTGCTGCTGCCGCAGCAGCCGA
AACTACGTCGTCTGCTGCAAAGAACAACAAGAAGACGGGGCGCAAGGGTT
CCGCCGAGAATCTCACCCCTTTACCGTCATCGCCACGGTCAGCTTCGCCG
TCGACTACACCGCCCACGGTTTCAGCGACGACCGCATCAGGTAACCGACT
TCACATGCGAACGGCGCCTCCGGTGTTGGCCCTGCCCGATGGCGCGGCGG
GGGTGCCTCACAGGGAAGGCGCGGATGAGTCCCCTCGAGCGGCGGACGGC
GGCGGCGGCTCCGGCGGTCGCAGGGCCCGCGCCCCGTCGCGGAAGCTCCT
CGAGGCCTCGGGAAGAGTGGCCGACGAGGGGGCACAGCTGCTGACCAAGG
CCAAGAAGGAGGAGGAGAACAGGCTCAAGAGGGAGATGAAGGAGCAGCGG
AGGGCTGCCAAGTCGGCGGGGCTCAAGCTCGGGGAGGTCATCGAGGCCAC
CGCCGCCCCGCTGTCCGAGGAGGGGTCCGGGAGCGGGGGCGGCGGCGGCG
GCGGCGGCGGCGGGAGCCGGGGTAGCGACGGGGGTGGCGACGCGTTTAGC
GCCGGCGAAGGGTCGCCATCGTGGAGGAAGCTGAGCCCGTCGGACATGCT
GCACGCAGCCCAACAGCAGCAGCAAGAAGAACAACAACCTGCGGAAGCGG
AAGCTAGGCAACGATCCTTGTCCACGAAGGACTCTGGCGTCAAGAACGGA
GCAGTGCCGACCGCGGGCAAGAAGCGGGAGAGGCCGAGTGCGCCGGCCGG
TGCCCCGGAGAACGGCGGCAGCAAGCCGGCGAAAGGGGACGGTGGCAAGC
CGACTGGCACACCCAGCCAAAGGCGCGGCAAGACCAGCAGCAGCAGCGGA
AGAACCGACAACGAAAAGAGCTCCAAGCGCCTCCGGCTGTCGAACGGAAG
TGGTGTTGGCGGCGGTAGCCGTGGCGGAAAGGGTCACGACAGCGCGGGGA
AACGGCGAAGCCCCCGGGTACACGAGGGCGAGGGGGAGAAGGGTGGCAAA
ACGGGAGGGGGAACGGTCAACGGCAAGGTCTTGTGCGAGATCGACACCTG
CTACAGGCCGGCTTCGTACGGGATAGGCGACACTGCGCGCCGTTGCAACA
TACACAAGACCCCCGCTGCTAAGGGCAGCAGCAAGCCCCTGCCTATCTGA
back to top