prot_Ecto-sp13_S_contig12335.1952.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12335.1952.1
Unique Nameprot_Ecto-sp13_S_contig12335.1952.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length311
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12335.1952.1 vs. uniprot
Match: D7G4J0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J0_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 2.180e-86
Identity = 257/311 (82.64%), Postives = 264/311 (84.89%), Query Frame = 0 
Query:    1 MLEQLEAVAVSEREAQEERLKAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGGVDGGTGGLRDGAAADPVSAAVVQSLDAKLEGIDDLIARLEIEEGEEGYGFVPSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXCGYDADREASQPPTETAVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKISVVEQLKAKEASGVSRNGVGGVXXXXXXXXXXXXXXXSEVSPPPKMDLLDAVAAMILGRYPQDPRASSEEHFQKIAAMHQNMK 311
            ML QLEAVA SER+A+E+RL AERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGGVDGG GGL DGAAADPVSAAVVQSLDAKLE IDDLIARLEIEEGEEGYGFVPSDDXXXXXXXXXXXX       XXXXXXXX   DADREASQPPTETA   XXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXX     SVVEQLKAKEASGVS NGVG V   XXXXXXXXXXX SEV+PPP+M LLDAVAAMILGR+PQDPRASSEEHFQKIAAMHQ+MK
Sbjct:  457 MLAQLEAVATSERDAKEKRLNAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGGVDGGPGGLGDGAAADPVSAAVVQSLDAKLEDIDDLIARLEIEEGEEGYGFVPSDDXXXXXXXXXXXXYLYNGENXXXXXXXXX--DADREASQPPTETAXXXXXXXXXXXXXXXXXXXXXXTKASVQPGDVANVAGAXXXXXXXXXXXXXXXXXXXX-----SVVEQLKAKEASGVSGNGVGSVREGXXXXXXXXXXXGSEVTPPPEMGLLDAVAAMILGRFPQDPRASSEEHFQKIAAMHQHMK 760
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BLAST of mRNA_Ecto-sp13_S_contig12335.1952.1 vs. uniprot
Match: A0A6H5JAG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG3_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 2.950e-76
Identity = 225/312 (72.12%), Postives = 230/312 (73.72%), Query Frame = 0 
Query:    1 MLEQLEAVAVSEREAQEERLKAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGG-VDGGTGGLRDGAAADPVSAAVVQSLDAKLEGIDDLIARLEIEEGEEGYGFVPSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXCGYDADREASQPPTETAVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKISVVEQLKAKEASGVSRNGVGGVXXXXXXXXXXXXXXXSEVSPPPKMDLLDAVAAMILGRYPQDPRASSEEHFQKIAAMHQNMK 311
            MLEQLEAVA SER A+EERL AERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGG VDGGTGGL DG AADPVSAAVVQSLDAKLEGIDDLIARLEIEEGEEG+GFVPSDDXXXXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXXX                                   XXXXXXXXXXXXX  SVVEQLKAKEASG SRNG+GGV               S VSPPP+M LLDAVAAMILGRYPQDPR SSEEHFQKIAAMHQ+MK
Sbjct:  458 MLEQLEAVAASERNAKEERLNAERQAELEAWRERRREQLERLIEVRPMFERRRAMAEEKLIAAGGGGVDGGTGGLGDGVAADPVSAAVVQSLDAKLEGIDDLIARLEIEEGEEGFGFVPSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXAEGGTAPGQSSGGEAAKASVQPGEVANVAGAAADAXXXXXXXXXXXXXXASVVEQLKAKEASGFSRNGIGGVREGGKGNGGKERGDGSGVSPPPEMGLLDAVAAMILGRYPQDPRVSSEEHFQKIAAMHQDMK 766
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12335.1952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4J0_ECTSI2.180e-8682.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAG3_9PHAE2.950e-7672.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..41
NoneNo IPR availableCOILSCoilCoilcoord: 88..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12335contigEcto-sp13_S_contig12335:538..4674 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12335.1952.1mRNA_Ecto-sp13_S_contig12335.1952.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12335 517..4674 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12335.1952.1 ID=prot_Ecto-sp13_S_contig12335.1952.1|Name=mRNA_Ecto-sp13_S_contig12335.1952.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp
MLEQLEAVAVSEREAQEERLKAERQAELEAWRERRREQLERLIEVRPMFE
RRRAMAEEKLIAAGGGVDGGTGGLRDGAAADPVSAAVVQSLDAKLEGIDD
LIARLEIEEGEEGYGFVPSDDDEDEDGTDRDDDDDYLYNGENEDDDNDCG
YDADREASQPPTETAVSAAAAAAAAAAAGGTAPGQSSGGGAAKALVQPGG
VANVAGAAADAAARKQANKKKKKNKKKISVVEQLKAKEASGVSRNGVGGV
RDGEGGNGEKEGGDGSEVSPPPKMDLLDAVAAMILGRYPQDPRASSEEHF
QKIAAMHQNMK
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