prot_Ecto-sp13_S_contig8170.19519.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8170.19519.1
Unique Nameprot_Ecto-sp13_S_contig8170.19519.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8170.19519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 4..35
e-value: 6.8E-5
score: 22.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..145
e-value: 3.7E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 4..144
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8170contigEcto-sp13_S_contig8170:3787..4470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8170.19519.1mRNA_Ecto-sp13_S_contig8170.19519.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8170 3787..4470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8170.19519.1 ID=prot_Ecto-sp13_S_contig8170.19519.1|Name=mRNA_Ecto-sp13_S_contig8170.19519.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
ILWPPSLEEIRFGASFNQPIQDIVWPACLQRLTFGHYFDQPVDIDWPETL
RQLTFGHCFDQRVDAVKWPSSLQELVFGAFFNQPIDGVLWPVSLRHLALT
GFFKHAIGNGAAWPSSLRRLTIGQNFIQPIATVSWPPLLEELTLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf