prot_Ecto-sp13_S_contig8167.19513.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8167.19513.1
Unique Nameprot_Ecto-sp13_S_contig8167.19513.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length43
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8167.19513.1 vs. uniprot
Match: A0A6H5JK81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK81_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.970e-8
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = 0 
Query:    3 RSGRTPLHHAASTGRKHMCHYLLLV 27
            RSGRTPLHHAAS GRKHMCHYLLLV
Sbjct: 1428 RSGRTPLHHAASAGRKHMCHYLLLV 1452
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BLAST of mRNA_Ecto-sp13_S_contig8167.19513.1 vs. uniprot
Match: D8LI60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI60_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 4.970e-8
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = 0 
Query:    3 RSGRTPLHHAASTGRKHMCHYLLLV 27
            RSGRTPLHHAAS GRKHMCHYLLLV
Sbjct: 1152 RSGRTPLHHAASAGRKHMCHYLLLV 1176
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8167.19513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK81_9PHAE4.970e-896.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI60_ECTSI4.970e-896.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 4..33
e-value: 3.7E-4
score: 29.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 4..36
score: 11.781
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..43
e-value: 6.2E-11
score: 44.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..43
NoneNo IPR availablePFAMPF13857Ank_5coord: 3..43
e-value: 3.3E-6
score: 27.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 4..43
score: 15.141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8167contigEcto-sp13_S_contig8167:6751..6879 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8167.19513.1mRNA_Ecto-sp13_S_contig8167.19513.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8167 6751..6879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8167.19513.1 ID=prot_Ecto-sp13_S_contig8167.19513.1|Name=mRNA_Ecto-sp13_S_contig8167.19513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=43bp
SQRSGRTPLHHAASTGRKHMCHYLLLVGGDKTARDDEGRTPMD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom