prot_Ecto-sp13_S_contig8166.19511.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8166.19511.1
Unique Nameprot_Ecto-sp13_S_contig8166.19511.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length365
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8166.19511.1 vs. uniprot
Match: D7G3Q1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q1_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 4.410e-119
Identity = 239/326 (73.31%), Postives = 247/326 (75.77%), Query Frame = 0 
Query:    1 MIPDEAIKRLRSLEHLDESPFLQRKSFRSAAAGACSRRRIAGSNNDPASSKRRPAANTAAVNTVGPETAEIGLGRRPRELPWLVTPAPSANQAVTTSNVAAAARGDGXXXXXXRRGSSRSGSTESTARSGRGGRQKRQQPRGRESHAELPGSGGCSEPGDASLSPSSRGWDKSTNGRLQRRGQEEEQDDRASEASAARASDTEWARRQRCQALALACAGSMDLPVGTSSSADLGGSGGAGGGKALALPFGLDPGSIGEDSPSSGGRGAGGGATGRGGLRRGQAMVVVFADRLSAALESNSAVPLEELQAGLLELRPFRFGIRSSSS 326
            MIPDEAIKRLRSLEHLDESPFLQRKSFRSAA GACSRRRI GSNNDPA+SK+RPAA   A NT GPET EIGLGRRPRELPWLVTPAPSANQA+TTSNVA       XXXXXX  GSSRS STESTA SG GG+QKRQQPRGR SHAELPGSGGCSEPGDA LSPS RGWDKS  G+ Q+RGQ+EEQDD A+EA    ASDTEWARR                                         FGL PGSIGEDSP SGGRGAGGGA GRGGLRRGQ MVVVFADRLSA LESNSAVPLEELQA LLELRPFRFGI SSSS
Sbjct:    1 MIPDEAIKRLRSLEHLDESPFLQRKSFRSAAGGACSRRRITGSNNDPANSKKRPAATITAANTAGPETVEIGLGRRPRELPWLVTPAPSANQAITTSNVAXXXXXXXXXXXXXXXGSSRSRSTESTAGSGCGGQQKRQQPRGRGSHAELPGSGGCSEPGDAYLSPSGRGWDKSAKGQNQKRGQKEEQDDSATEAXXXXASDTEWARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGLGPGSIGEDSPFSGGRGAGGGANGRGGLRRGQGMVVVFADRLSAVLESNSAVPLEELQAELLELRPFRFGIPSSSS 326
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BLAST of mRNA_Ecto-sp13_S_contig8166.19511.1 vs. uniprot
Match: A0A6H5KEU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU3_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 4.520e-100
Identity = 205/281 (72.95%), Postives = 210/281 (74.73%), Query Frame = 0 
Query:   46 DPASSKRRPAANTAAVNTVGPETAEIGLGRRPRELPWLVTPAPSANQAVTTSNVAAAARGDGXXXXXXRRGSSRSGSTESTARSGRGGRQKRQQPRGRESHAELPGSGGCSEPGDASLSPSSRGWDKSTNGRLQRRGQEEEQDDRASEASAARASDTEWARRQRCQALALACAGSMDLPVGTSSSADLGGSGGAGGGKALALPFGLDPGSIGEDSPSSGGRGAGGGATGRGGLRRGQAMVVVFADRLSAALESNSAVPLEELQAGLLELRPFRFGIRSSSS 326
            +PASSK+RPAANTAA NT GPETAEIGLGRRPRELPWLVTPAPSANQAVTTSNVAAAA  DG      RRGSSRSGSTESTA SG GGRQK   PRGR  HAELPGSGGCSEPGDASLSPS R WDKSTNGRLQ+R Q+EEQDDRASEASAA ASD EWARRQRCQALA                                   GL PGSIG+DSPSS        A GRGGLRRGQ MVVVFADRLSA LESNSAVPLEELQAGLLELRPFRFGI  SSS
Sbjct:   32 EPASSKKRPAANTAAANTAGPETAEIGLGRRPRELPWLVTPAPSANQAVTTSNVAAAAGADGRSGADARRGSSRSGSTESTAGSGCGGRQKXXXPRGRGRHAELPGSGGCSEPGDASLSPSGRNWDKSTNGRLQKRWQKEEQDDRASEASAATASDAEWARRQRCQALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGPGSIGDDSPSSXXXXXXXXANGRGGLRRGQGMVVVFADRLSAVLESNSAVPLEELQAGLLELRPFRFGIPFSSS 312
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8166.19511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3Q1_ECTSI4.410e-11973.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEU3_9PHAE4.520e-10072.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8166contigEcto-sp13_S_contig8166:1..4476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8166.19511.1mRNA_Ecto-sp13_S_contig8166.19511.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8166 1..4691 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8166.19511.1 ID=prot_Ecto-sp13_S_contig8166.19511.1|Name=mRNA_Ecto-sp13_S_contig8166.19511.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=365bp
MIPDEAIKRLRSLEHLDESPFLQRKSFRSAAAGACSRRRIAGSNNDPASS
KRRPAANTAAVNTVGPETAEIGLGRRPRELPWLVTPAPSANQAVTTSNVA
AAARGDGGSGGGARRGSSRSGSTESTARSGRGGRQKRQQPRGRESHAELP
GSGGCSEPGDASLSPSSRGWDKSTNGRLQRRGQEEEQDDRASEASAARAS
DTEWARRQRCQALALACAGSMDLPVGTSSSADLGGSGGAGGGKALALPFG
LDPGSIGEDSPSSGGRGAGGGATGRGGLRRGQAMVVVFADRLSAALESNS
AVPLEELQAGLLELRPFRFGIRSSSSSSSSSSLSSSASSMSSSSSALSDL
EDVDSGGDGGTGSGS
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