prot_Ecto-sp13_S_contig12329.1949.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12329.1949.1
Unique Nameprot_Ecto-sp13_S_contig12329.1949.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length179
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12329.1949.1 vs. uniprot
Match: D7FWZ4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ4_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 4.230e-119
Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0 
Query:    1 MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALDQGKSYAERAHAAGGLGIGVGHGL 173
            MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALDQGKSYAERAHA GG+G GVGHGL
Sbjct:   41 MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALDQGKSYAERAHAGGGVGNGVGHGL 213
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BLAST of mRNA_Ecto-sp13_S_contig12329.1949.1 vs. uniprot
Match: A0A6H5KRK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK2_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 2.100e-116
Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0 
Query:    1 MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALDQGKSYAERAHAAGGLGIGVGHGLR 174
            MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALDQGKSYAERAHAAGG+G GVGHGLR
Sbjct:   41 MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIRVSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEESFLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALDQGKSYAERAHAAGGVGNGVGHGLR 214
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12329.1949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWZ4_ECTSI4.230e-11998.27PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KRK2_9PHAE2.100e-11698.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainPFAMPF00787PXcoord: 44..145
e-value: 4.3E-9
score: 36.4
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 25..151
score: 12.041
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 9..154
e-value: 3.9E-18
score: 67.5
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 40..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12329contigEcto-sp13_S_contig12329:79..4348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12329.1949.1mRNA_Ecto-sp13_S_contig12329.1949.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12329 70..4348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12329.1949.1 ID=prot_Ecto-sp13_S_contig12329.1949.1|Name=mRNA_Ecto-sp13_S_contig12329.1949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp
MLMNTGQGLAIEKNLAKFDVKVLAAETRKQAWIKDLGIGPKTSFVVYIIR
VSRIRDGASCVSAQRYSELRSLYNHLKHEGQVRSEGAPEFPGKRVVTEES
FLGDRSDANSEFVRHRKEQLGSFLRQLFNKNPELWEHPDVVEFFNLEALD
QGKSYAERAHAAGGLGIGVGHGLRCGAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR036871PX_dom_sf