prot_Ecto-sp13_S_contig8132.19471.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8132.19471.1
Unique Nameprot_Ecto-sp13_S_contig8132.19471.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length309
Homology
BLAST of mRNA_Ecto-sp13_S_contig8132.19471.1 vs. uniprot
Match: D7G428_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G428_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 6.500e-167
Identity = 238/304 (78.29%), Postives = 269/304 (88.49%), Query Frame = 0
Query:    1 MTFADMKVLAGYYTEDGKYLGGIPKADGVSREIYECAMDGFFYPT--DTIANSTDGTDDATACMEWRADESAGGTFQLGSCECKSVDNESYCSAWICIQVTEEEECSSDGGSCFVSTNTDSVLCQCDLETASGLYCDSWSCKQVDSEGREEFEEYHCQXXXXXXXXXXXXNGNVTASDEVEVVTCECVATWNGDHVCSYWECEEIGLKSCSSTRGWCNLGLSVGLAGVFGLAGAVLAGW-IVGVGCFEQDITDIWAVVGMGVGGILWCMVWAVGVVIWGGVDGVVFVGIMWGIGFLLASST-GC 300
            MTFADMKVLAGYYTEDGKYLGGIPKAD VS+EIYECA D +FYP+  DT+ +STDG D+ATACMEWRADESAGG FQ G+CEC S+DNE+YCSAW C QV EEE+C+S G +C VSTNTD+VLCQCDL+  SGLYCDSWSCKQ+DS+GREEFEEYHCQ  XXXXXXXXXXNGNVTASDEVEVVTCECVATW+GD +CSYWECEEIGL SC+STRGWC+LGLS+GLAGVFGLAGA+ AG+     GCFE+  T + AVV  GVGGILWCMVW+VGVVIWGG+DGVV+VGIMWG+GFLLA++T GC
Sbjct:   58 MTFADMKVLAGYYTEDGKYLGGIPKADPVSKEIYECAADTYFYPSGNDTVTDSTDGKDEATACMEWRADESAGGVFQKGTCECTSIDNENYCSAWTCNQVKEEEDCNSSGSNCVVSTNTDAVLCQCDLDVPSGLYCDSWSCKQIDSDGREEFEEYHCQREXXXXXXXXXXNGNVTASDEVEVVTCECVATWSGDRLCSYWECEEIGLSSCNSTRGWCDLGLSIGLAGVFGLAGALAAGFSFASFGCFERSTTGMRAVVCTGVGGILWCMVWSVGVVIWGGLDGVVYVGIMWGVGFLLATNTTGC 361          
BLAST of mRNA_Ecto-sp13_S_contig8132.19471.1 vs. uniprot
Match: A0A6H5JXC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC2_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 2.690e-102
Identity = 177/236 (75.00%), Postives = 185/236 (78.39%), Query Frame = 0
Query:    1 MTFADMKVLAGYYTEDGKYLGGIPKADGVSREIYECAMDGFFYPTDTIANSTDGTDDATACMEWRADESAGGTFQLGSCECKSVDNESYCSAWICIQVTEEEECSSDGGSCFVSTNTDSVLCQCDLETASGLYCDSWSCKQVDSEGREEFEEYHCQXXXXXXXXXXXXNGNVTASDEVEVVTCECVATWNGDHVCSYWECEEIGLKSCSSTRGWCNLGLSVGLAGVFGLAGAVLAG 236
            MTF DMKVLAGYYTEDGK             EIYECA DGFFYPTDT+ANSTDG  +ATACMEWRADESAG                 YCSAWICIQV E EEC+SDG SCFVSTNT+SVLCQCDLETASGLYCDSWSCKQ+DSEGREEFEEY+CQ XXXXXXXXXXXNGNVTASDEVEVVTCECVAT     V +Y      GLKSCSS RGWC+LGLSVGLAGVFGLAGAVLAG
Sbjct:   34 MTFTDMKVLAGYYTEDGK-------------EIYECATDGFFYPTDTMANSTDG--EATACMEWRADESAG-----------------YCSAWICIQVAEVEECNSDGDSCFVSTNTNSVLCQCDLETASGLYCDSWSCKQIDSEGREEFEEYYCQRXXXXXXXXXXXNGNVTASDEVEVVTCECVATGT---VITY------GLKSCSSIRGWCDLGLSVGLAGVFGLAGAVLAG 228          
BLAST of mRNA_Ecto-sp13_S_contig8132.19471.1 vs. uniprot
Match: D7FR75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR75_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 2.580e-75
Identity = 143/319 (44.83%), Postives = 181/319 (56.74%), Query Frame = 0
Query:    1 MTFADMKVLAGYYTEDGKYLGGIPKADGVSREIYECAMDGFFYPTDTIANSTDGTDDATACMEWRADESAGGTFQLGSCECKSVDNESYCSAWICIQVTEEEECSSDGGSCFVSTNTDSVLCQCD-LETASGLYCDSWSCKQVDSEGREEFEEYHCQXXXXXXXXXXXXNGNVTASDEVEVVTCECVATWNGDHVCSYWECEEIGLKSCSST-RGWCNLGLSVGLAGVFGLAGAVLAGWIVG-VGCFEQDITDIWAVVGMGVG-GILWCMVWAVGVVIWGGVDGVVFVGIMWGIGFLLASSTGCW-------YRKKDRQ 308
            MT ADM+VLAGYY+ DGKYLGG+PKA  +SREIY+C    +  P +T +N       AT C  W ADES GG FQLG CECK     S             +E            N+D  LCQCD    A GL     SCKQ+ S GR EFE+Y CQ            NGNVTASDE E+V+CEC+A W+GD VCS+WECEE+GL +CSS    WC+LG+S+G+ G  GL G ++  + +G VG  + +         MG+  G +WC+ W+ GVVIWGG  G  +VGIMWG+  +LA+    +        R KD Q
Sbjct:   60 MTLADMEVLAGYYSADGKYLGGMPKAHTLSREIYDCTDFQYSEPNNTASN-------ATYCTGWSADESYGGGFQLGDCECKF----SXXXXXXXXXXXXXQE------------NSDYTLCQCDDTGAAEGLXXXXXSCKQICSGGRAEFEDYRCQRPSPSGHYCEAWNGNVTASDEFEIVSCECLANWHGDQVCSFWECEELGLSTCSSAGASWCDLGVSIGVGGGIGLLGVLVICYGIGLVGRIDSEGQSDTTAGLMGIALGTVWCLSWSSGVVIWGGEAGATYVGIMWGVPIVLAAVVAAFRCFAVYRVRTKDEQ 355          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8132.19471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G428_ECTSI6.500e-16778.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JXC2_9PHAE2.690e-10275.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR75_ECTSI2.580e-7544.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 251..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 240..250
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 281..302
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..216
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 303..308
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 276..280
NoneNo IPR availableTMHMMTMhelixcoord: 280..302
NoneNo IPR availableTMHMMTMhelixcoord: 253..275
NoneNo IPR availableTMHMMTMhelixcoord: 219..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8132contigEcto-sp13_S_contig8132:2341..3682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8132.19471.1mRNA_Ecto-sp13_S_contig8132.19471.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8132 2246..3988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8132.19471.1 ID=prot_Ecto-sp13_S_contig8132.19471.1|Name=mRNA_Ecto-sp13_S_contig8132.19471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=309bp
MTFADMKVLAGYYTEDGKYLGGIPKADGVSREIYECAMDGFFYPTDTIAN
STDGTDDATACMEWRADESAGGTFQLGSCECKSVDNESYCSAWICIQVTE
EEECSSDGGSCFVSTNTDSVLCQCDLETASGLYCDSWSCKQVDSEGREEF
EEYHCQREAESGHYCEAWNGNVTASDEVEVVTCECVATWNGDHVCSYWEC
EEIGLKSCSSTRGWCNLGLSVGLAGVFGLAGAVLAGWIVGVGCFEQDITD
IWAVVGMGVGGILWCMVWAVGVVIWGGVDGVVFVGIMWGIGFLLASSTGC
WYRKKDRQ*
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