prot_Ecto-sp13_S_contig12325.1946.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12325.1946.1
Unique Nameprot_Ecto-sp13_S_contig12325.1946.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length78
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12325.1946.1 vs. uniprot
Match: D7FVC0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC0_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 4.050e-29
Identity = 60/78 (76.92%), Postives = 62/78 (79.49%), Query Frame = 0 
Query:    1 MWCTCILVETLDVQG-VEANRQLGTRGCRRAGALGRSSQLAAMPLAPPPRRQPTLPLQKRQVKASINAECCRGQRWAP 77
            M C CILVETLDV   VEANRQLG RG R AGALGRSSQLAA+PLAPPPRR+      KRQVKASINAECCRG R AP
Sbjct:    6 MRCMCILVETLDVVACVEANRQLGARGRRTAGALGRSSQLAAVPLAPPPRRR-----HKRQVKASINAECCRGPRRAP 78
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12325.1946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVC0_ECTSI4.050e-2976.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12325contigEcto-sp13_S_contig12325:1529..2839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12325.1946.1mRNA_Ecto-sp13_S_contig12325.1946.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12325 1529..2851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12325.1946.1 ID=prot_Ecto-sp13_S_contig12325.1946.1|Name=mRNA_Ecto-sp13_S_contig12325.1946.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp
MWCTCILVETLDVQGVEANRQLGTRGCRRAGALGRSSQLAAMPLAPPPRR
QPTLPLQKRQVKASINAECCRGQRWAP*
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