mRNA_Ecto-sp13_S_contig8119.19461.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8119.19461.1
Unique NamemRNA_Ecto-sp13_S_contig8119.19461.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: A0A6H5KJH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH4_9PHAE)

HSP 1 Score: 585 bits (1509), Expect = 1.180e-204
Identity = 336/358 (93.85%), Postives = 340/358 (94.97%), Query Frame = 1
Query:    1 QGVVRSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPGALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPDHRPRTPITPPPAPKPFNDAPAAXXXXXXXXXXXGSXXXXXXXXXXXXXXXXEAAKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREERALKQTQQGGGR 1074
            QGVVRSALETGTLDVEGRG+TSLPPGLFQDDR L AVTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALP ALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSD+SGLPWAALGSLE LDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTV TLAYLRDRLPPD+RPRTP+TPPPAPKPFNDAPAAXXXXXXXXX  GS XXXXXXXX       EAAKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREER LKQ QQG GR
Sbjct:  300 QGVVRSALETGTLDVEGRGVTSLPPGLFQDDRALLAVTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPDALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLENLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVATLAYLRDRLPPDYRPRTPMTPPPAPKPFNDAPAAXXXXXXXXXAHGSVXXXXXXXX-------EAAKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREERVLKQAQQGRGR 650          
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: D8LFI7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI7_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 9.460e-159
Identity = 287/359 (79.94%), Postives = 288/359 (80.22%), Query Frame = 1
Query:    1 QGVVRSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPGALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPDHRPRTPITPPPAPKPFNDAPAAXXXXXXXXXXXGSXXXXXXXXXXXXXXXX-EAAKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREERALKQTQQGGGR 1074
            Q V RSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQ                                                   AFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSD+SGLPWAALGSLETLDLSNNRLR LGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTV TLAYLRDRLPPDHRPRTPITPPPAPKPFNDA AA             XXXXXXXXXXXXXXXX EAAKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREERALKQ QQGGGR
Sbjct:  437 QAVSRSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQ---------------------------------------------------AFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRCLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVATLAYLRDRLPPDHRPRTPITPPPAPKPFNDATAAGTGSSAHGSLGXXXXXXXXXXXXXXXXXXXEAAKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREERALKQAQQGGGR 744          
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: A0A421FIP6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FIP6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 7.930e-35
Identity = 117/384 (30.47%), Postives = 181/384 (47.14%), Query Frame = 1
Query:   34 TLDVEGRGMTSLPPGL--------FQDDRTLSA-------------VTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPGALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPDH--RPRTPIT---------------------PPPAPKPFNDAPAAXXXXXXXXXXXGSXXXXXXXXXXXXXXXXEAAKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREERALK 1050
            TLDV    +T LPPGL        F  D  L A             +    LS N+ + LP EI   + L T+  ++N L +L  ++A +  +  L L++N LS+ +  E FL         S  L  S++ELDL +N L  +P  +     L+TL+LA+N +  +   PW+ L ++  + +SNN+LRSLG +     L  L+ ENN+++ VP ELGLC  L ++ + GNPQR +  +++ +G+   L YL+++LPP+    P +P+T                     P   P+  N A AA           G                      +  L+A++E L  + + P LS  K +ALKK+L + RA  IRE R +K
Sbjct:  182 TLDVANNDLTDLPPGLGYLKHLNHFIVDGVLPADLVSQGQFNFGETLLHLNLSSNQFRVLPAEIGELKLLKTLTVESNELQSLHPSIAGLPHLELLRLQKNQLSAESISE-FLH-------NSTALGRSLKELDLRNNCLTSMPLELCQLHSLETLLLAFNRIETLEQFPWSQLTNVSLISISNNKLRSLGRIYDAPLLASLSFENNNLTKVPCELGLCPNLRAIYMNGNPQRTVRGAVIAKGSTEILTYLKNKLPPNAVLPPPSPMTRAFKTDQVGSTQISSSREGRTPSGTPRSANTAYAAHGNYAQDE---GPAPVAPVDSFAPIVENSAVDVELVKLSAQIEQLESQLDNPSLSAPKRFALKKELAVVRAKKIREARKIK 554          
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: A0A3F2RWM2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWM2_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.290e-32
Identity = 86/259 (33.20%), Postives = 141/259 (54.44%), Query Frame = 1
Query:   13 RSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVT--RAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPGALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPDHRPRTPITPPPAP 780
            R A  TGT+ +    +  LP  L    +     T     LS N+ + LP EI   + L T+  ++N L +L  ++A +  +  L L++N LS+ +  E FL         S  L  S++ELDL +N L  +P  +     L+TL+LA+N +  +   PW+ L ++  + +SNN+LRSLG +     L  L+ ENN+++ VP ELGLC  L ++ + GNPQR +  +++ +G+   L YL+++LPP+      + PPP+P
Sbjct:  347 REAAATGTMVLMNNSLGVLPADLVSQGQFNFGETLLHLNLSSNQFRVLPAEIGELKLLKTLTVESNELQSLHPSIAGLPHLGLLRLQKNQLSAESISE-FLH-------NSTALGRSLKELDLRNNCLTSMPLELCQLHSLETLLLAFNRIETLEQFPWSQLTNVSLISISNNKLRSLGRIYDAPLLASLSFENNNLTKVPCELGLCPNLRAIYMNGNPQRTVRGAVIAKGSTEILTYLKNKLPPNA-----VLPPPSP 592          
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: T0QQ18_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QQ18_SAPDV)

HSP 1 Score: 137 bits (344), Expect = 6.470e-32
Identity = 105/363 (28.93%), Postives = 172/363 (47.38%), Query Frame = 1
Query:    7 VVRSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPGALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPDHRPRTPIT-------PPPAPKPFND----------APAAXXXXXXXXXXXGSXXXXXXXXXXXXXXXXEAAKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREER 1041
            V   A  +G+LD+  + ++++P  ++  +   S++T   LS   L  LP E+     +TT+ A++  L ALP ++  +  +  L LR+NSL+      AF A             + ++ELD+ +N L  +P  +     L TL+L++N LS ++G+PW  + +L  +  S+N+L  LG +     L  L++ENN +  +P ELGLC  L++L ++GNPQR +  + + +GT   ++YL+++L P+   +   T        PP P P +D          +PAA            S                            + AL  + E PGLS AK YALKK L   RA  +R  R
Sbjct:  392 VFMEAAASGSLDLTSQRLSAVPQEVWSFEPLTSSLTSLTLSKTGLCALPDELGLCLQITTLVAEDCRLEALPTSVLGLPHLVYLRLRKNSLTEHTFAGAFHA------------RMKLKELDVRNNALSMLPANLHQLSSLNTLLLSFNRLSTLAGMPWRLMKALSIVSASDNKLTDLGTIFEAPTLSSLSVENNSLQAIPAELGLCPKLKALYISGNPQRTVRIATVNKGTDEIMSYLKNKLLPEEIAQILATRDCNAQGDPPPPSPVHDHLQRTSPPAASPAAVTRTTTPREPEASPYDGP-----------------------IAALEAQLEDPGLSAAKRYALKKDLAKARAEKLRSSR 719          
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: A0A329S1P8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S1P8_9STRA)

HSP 1 Score: 137 bits (344), Expect = 6.990e-32
Identity = 83/246 (33.74%), Postives = 135/246 (54.88%), Query Frame = 1
Query:   13 RSALETGTLDVEGRGMTSLPPGLFQDDRTL--SAVTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPGALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPD 741
            R A  +G++ +    +  LP  L    +    S +    LS N L++LP  I    +L T+  + N L +L  ++A +  +  L LR+NSLS+ +  E     PA        L  +++ELDL SN L  VP  I   R L+TL+L +N +  +   PW+ + ++  + LS+N+LRSLG +     L  L+ ENN+++ VP ELGLC  L ++ + GNPQR +   ++ +G+   LAYL+++LPP+
Sbjct:  399 REAAASGSIILMNNSLGVLPSDLVGQGQFNFGSTLLHLNLSSNLLRSLPAVIGELVSLKTLTVEENELQSLHPSIAALPHLELLRLRKNSLSAESISEFLGDSPA--------LGNTLKELDLRSNSLLTVPVEICQLRSLETLLLGFNRIESLDRFPWSQMANVSVVSLSDNKLRSLGRIYDAPLLASLSFENNNLTKVPCELGLCPHLRAIYMNGNPQRTVRGGVIAKGSTEILAYLKNKLPPN 636          
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: A0A2D4C1Q2_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1Q2_PYTIN)

HSP 1 Score: 137 bits (345), Expect = 7.480e-32
Identity = 87/251 (34.66%), Postives = 141/251 (56.18%), Query Frame = 1
Query:    7 VVRSALETGTLDVEGRGMTSLPPGLFQDD----RTLSAVTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPGALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAP---PGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLP 735
            V R A  +GTLD+  + +  +P  +  D     R  S +    LS N L +LP  I +   L ++ A++N + ++  ++A +  +  L +R+N L++SA +E FL   + AP   PG       ++ELDL +N L ++P +I     L+TL+LA+N +  + G PW  L     + LS+NRLRSLG V L   L  L  ENN++  VP ELGLC  L ++ + GNPQ+ +  +++ +G+   L YL+++LP
Sbjct: 1246 VYRDAASSGTLDLSSQLLQHVPSEVSGDTSLPYRFESTLVHLNLSKNLLTSLPNTIGQLVALQSLTAEDNRIKSVDPSIALLPQLQLLRIRKNQLTASA-IEEFLGSISGAPVPCPG-------LKELDLRNNLLTDLPNSIAKLPKLETLLLAFNKVETLDGFPWHKLQRTSVISLSDNRLRSLGQVYLAPMLASLAFENNNLVSVPCELGLCPHLRAIYMNGNPQKTVRGAVIAKGSAEILMYLKNKLP 1488          
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: A0A0N7L4J0_PLAHL (Leucine-rich repeat protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4J0_PLAHL)

HSP 1 Score: 134 bits (336), Expect = 8.180e-31
Identity = 85/246 (34.55%), Postives = 133/246 (54.07%), Query Frame = 1
Query:   13 RSALETGTLDVEGRGMTSLPPGLFQDDRTL--SAVTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPGALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPD 741
            R A  + TLD+    +  LP  L    R    S +    LS N L+ LP  I     L T+ AD N L  L  ++A +  +  L LR+N L++ A  + FL         S  L  +++E+DL SN L  +P      R L+ L+L++N +  +   PW+ L  +  +DLS+N+LRSLG +     L+ L+ ENN+I+ VP+ELGLC  L ++ + GNPQR +   ++ +G+   +AYL+++LP D
Sbjct:  398 RDAAASRTLDLTNSCLYVLPSDLVGKGRFSFGSTLIHLNLSLNHLRLLPAVIGELMFLKTLTADENDLEILHSSIAALPRLEVLRLRKNYLTADAIAD-FLR-------NSTTLGTTLKEIDLRSNKLSIIPVETGQLRSLENLLLSHNQIEALDQFPWSHLTKVSVIDLSDNKLRSLGRIYDAPLLQSLSFENNNITKVPVELGLCLHLSAIYMNGNPQRTVRGGVIAKGSAEVVAYLKNKLPLD 635          
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: A0A662X873_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X873_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.180e-29
Identity = 109/374 (29.14%), Postives = 174/374 (46.52%), Query Frame = 1
Query:   13 RSALETGTLDVEGRGMTSLPP-----GLFQDDRTLSAVTRAKLSGNKLQTLPGEISRFENL---TTIEADNNGLSALPGALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPDH-------------------RPRTPITPPPAPKPFN-DAPAAXXXXXXXXXXXGSXXXXXXXXXXXXXXXXEAAKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREERAL 1047
            R A  +G L +    + ++P      G F  + TL  +    LS N+L++LP  I     L   TT+  ++N L +L  ++A +  +  L LR+N LS+ +  +     PA        LS +++E DL +N L  +P  I     L+TL+L +N +  +   PW+ L  L    +S+N+LRSLG +     L  L+ ENN+++ VP ELGLC  L ++ + GNPQR +   ++ +G+   LAYL+++LPP                       + P TPP +  P   D   A            +                     +A L+A+++ L  + E   LS  K +ALKK+L M R++ IRE R L
Sbjct:  361 REAAASGALVLTKSSLGNVPAELAGHGQFSFESTLLHLN---LSMNRLRSLPSAIGELRGLKVSTTLTVEDNELQSLHPSIAALPHLELLRLRKNPLSADSISDFLGDSPA--------LSSTLKEFDLRNNCLTTLPLEISQLHELETLLLGFNKMETLERFPWSHLAKLSLASISDNKLRSLGRIYDAPMLASLSFENNNLTKVPCELGLCPHLRAIYMNGNPQRTVRGGVIAKGSAEILAYLKNKLPPSAVLSPPSPVGLSRAFAKEQTNAKKPATPPASGTPRRADYTYAAHGILDQQEEQSAAPVAPVDSFAAPATTAIVQAELAKLSAQIQQLESKLENHALSGPKRFALKKELAMARSSKIREARKL 723          
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Match: A0A0W8CHV7_PHYNI (Leucine-rich repeat-containing protein 40 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CHV7_PHYNI)

HSP 1 Score: 127 bits (320), Expect = 3.970e-29
Identity = 78/248 (31.45%), Postives = 126/248 (50.81%), Query Frame = 1
Query:   13 RSALETGTLDVEGRGMTSLPP-----GLFQDDRTLSAVTRAKLSGNKLQTLPGEISRFENLTTIEADNNGLSALPGALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPD 741
            R A  +GT+ +    +T LP      G F  + TL  +    LS NKLQ+LP  I     L T+  ++                          SS ++  FL         S  L  +I+ELDL +N L  +P  +   R L+TL+L++N +  +   PW+ L ++  + +S+N+LRSLG +     L  L+ ENN+++ VP ELGLC  L ++ + GNPQR +  +++ +G+   LAYL+++LPP+
Sbjct:  172 REAAASGTMILTNNSLTLLPSDLVGQGSFNFESTLLHLN---LSANKLQSLPAAIGELLPLKTLTVEDXXXXXXXXXXXXXXXXXXXXXXXXXLSSESISEFLG-------DSPALGDTIKELDLRNNSLSRLPVEVSQLRSLETLLLSFNKIETLDRFPWSQLANVSVISVSDNKLRSLGRIYDAPQLASLSFENNNLTKVPCELGLCPRLRAIYMNGNPQRTVRGTVIAKGSAEILAYLKNKLPPN 409          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8119.19461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJH4_9PHAE1.180e-20493.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFI7_ECTSI9.460e-15979.94Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A421FIP6_9STRA7.930e-3530.47Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A3F2RWM2_9STRA3.290e-3233.20Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
T0QQ18_SAPDV6.470e-3228.93Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A329S1P8_9STRA6.990e-3233.74Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A2D4C1Q2_PYTIN7.480e-3234.66Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A0N7L4J0_PLAHL8.180e-3134.55Leucine-rich repeat protein n=1 Tax=Plasmopara hal... [more]
A0A662X873_9STRA2.180e-2929.14Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A0W8CHV7_PHYNI3.970e-2931.45Leucine-rich repeat-containing protein 40 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8119contigEcto-sp13_S_contig8119:3600..6383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score477.2
Seed ortholog evalue6.5e-132
Seed eggNOG ortholog2880.D8LFI7
Model size1077
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.Leucine-rich repeats, outliers
EggNOG OGsCOG4886@1,KOG0472@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-04_002035.1
Cds size1077
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464084.3815548-CDS-Ecto-sp13_S_contig8119:3599..40481681464084.3815548-CDS-Ecto-sp13_S_contig8119:3599..4048Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8119 3600..4048 -
1681464084.3957658-CDS-Ecto-sp13_S_contig8119:4527..47261681464084.3957658-CDS-Ecto-sp13_S_contig8119:4527..4726Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8119 4528..4726 -
1681464084.4076223-CDS-Ecto-sp13_S_contig8119:5233..55181681464084.4076223-CDS-Ecto-sp13_S_contig8119:5233..5518Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8119 5234..5518 -
1681464084.4192395-CDS-Ecto-sp13_S_contig8119:6239..63831681464084.4192395-CDS-Ecto-sp13_S_contig8119:6239..6383Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8119 6240..6383 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8119.19461.1prot_Ecto-sp13_S_contig8119.19461.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8119 3600..6383 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8119.19461.1

>prot_Ecto-sp13_S_contig8119.19461.1 ID=prot_Ecto-sp13_S_contig8119.19461.1|Name=mRNA_Ecto-sp13_S_contig8119.19461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp
QGVVRSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQTL
PGEISRFENLTTIEADNNGLSALPGALARMAIYRLSLRRNSLSSSAAVEA
FLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYN
PLSDMSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNDISP
VPLELGLCTGLESLLLAGNPQRQISPSLLQRGTVTTLAYLRDRLPPDHRP
RTPITPPPAPKPFNDAPAAAAAAGTGSSTHGSLGGGAGGGGGSGGGGGEA
AKRIALLTAEVEALREETEAPGLSQAKAYALKKKLQMKRAALIREERALK
QTQQGGGR*
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mRNA from alignment at Ecto-sp13_S_contig8119:3600..6383-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8119.19461.1 ID=mRNA_Ecto-sp13_S_contig8119.19461.1|Name=mRNA_Ecto-sp13_S_contig8119.19461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2784bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8119:3600..6383- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGAGTAGTGAGGAGCGCGCTAGAGACGGGCACGCTAGACGTGGAGGG AAGAGGGATGACTTCGCTGCCTCCGGGGCTGTTCCAGGATGACCGCACGC TGTCGGCGGTGACCAGGGCCAAGCTTTCCGGCAACAAGCTGCAGGTTTGG AAGTCTCATGCTGTTGCTGCTGCTGCTGCTGCTGCTGTTGCATTTTTGTT GCCTGCATTGTTTTTTGGGAAGGGGATTTTCAGAAGTTGCTGACCAATGT CGGTTGGGAGTGCCTGCCGTGCTGATGATACCGCTGCAGCTGCTACGGCT GTCGTTATCGTTCCCGGCTCCTGCGTTTAGCTAGTATAATGGTATATGTC TGTCATTGCAAACAACTAATGGCGGTTGGGATTGTAGGTATCTCCTCCGC CGTTGGAATAACCTCGTTCCGCACATACGTTGGGGCGGGGCTATATGCTG CATGCACCATTTTGTCTTGTTTTGGTGTTGTTTTCTAGGATTCTTGCTGT GATACATGAAACCACAGGTGAACATTTCAGACATCTTCACGGTTTAGAAT AGAACTAGTGGCGGTGCGGTATTCGTGTGTTATCGCACGGGCATGGTGCA GTGCGGTGCGGCCGAAAACAATCGCACCGTGAACATCAGTGGAATGTGTG GCAGGGAAAGAGGCCCCCGTCCGTTGTGCAGCAGTAGAGTACAAGGTTAT TTAGTTTCTCGCAGAAACAGGTGTCACAATCTCTGTCCGCTTCAACCATG TGGGAACAATGCTCCGTCGTCTCGAGGACGGGTGGTCAATCGTCTAACCG CTAAGGCATGCAAAACGCCGCCCCCCCCCCCCCCCCCCCGCCCCCCCCCC CCCCATATTTTCCAGACCCTCCCCGGCGAAATCTCCCGATTCGAAAACCT CACGACCATCGAAGCGGACAACAACGGCCTCTCCGCCTTGCCCGGCGCGC TGGCCCGCATGGCCATCTACCGCCTCTCCCTCCGCCGGAACTCTCTCTCG TCGTCCGCGGCCGTGGAGGCGTTCTTAGCGCCGCCGGCGATAGCGCCTCC CGGGAGCCTGCCGCTGTCGATATCCATCAGGGAGTTGGACCTGTCGTCCA ACGATCTGGGCGAGGTGCCCCCGGCTATCTTTGCCTGCCGTGGCCTGCAG GTGTGCGTGTATGGGTGTATGGTGTAGGTGTTGTTTCAAGTGTTAATTGT GGTTGGGGTTGGTTTGGTTGTTGAAGGTCCCGACACAAAGAGCTTTTGAT TGTTGTAGTTCGGGTCCATACTGTACCATGTCTCGGGTCCTCGTGTATCG ACGACCAAAAATGTTTACTCTGTATGTTTTTCTTCTCCTTCCACGCTCTT GCTAGCGCTGCTGTCGCTGTCAACCCGCCGTCGCCCGTAAGCTCGGCTCC AACAAACACCGACCACCATCCGTTGCCGCTACCATTCCCCCCCGCTTTTA TTCTTTGGCCTGTACCCGATAGGCTTTTGCTTCGTATTTTTGTTGTCGAG TTGGGTTATTCTATTCTGAAAATTCATGTAGGTGGAAGAAAAGTAAGTGC ATACATCTAAACCGCAAAAAAAAAAATTACCTATCGAGAACAGGCCTATC TATTTTCCCATCGCGCCACAACACGACTCTCCCTCCCTCCCTCCCTCCCT TGCCCAGACGCTAGTCCTGGCCTACAACCCCCTGTCGGACATGTCTGGCC TGCCCTGGGCAGCTCTAGGGAGTCTCGAGACCCTTGACCTCTCGAACAAC CGCCTTCGCTCCCTGGGAGACGTTGTCCTCATGACCTGGTTGCGCCGCCT CAACCTCGAGAACAACGACATTTCTCCGGTGCCGCTGGAACTCGGCCTGT GTACGGGTGAGCGGAATGTGGGGAAGGTTTGGATGTGAGAAGGGAGGGCC GCCGTGTTATTTTTCTGTTTTCAGGTTTGTATGCGTGAGGACGACATTGA TATTTCATGTTTGTGTTCAGGTTTGGATGTGGGAGGGCGGCCGCGTTAAC TCTCTGTATTTAGATTTGCATGTGGGAGGACCACCGTGTTATTTGATGTG TGATTTAGGTTCATCTCTCTCTATCTGTAACACCGACAACACGCCAACCG GCTGACCAACGACAGCACACCAGGAGGCACGACAAAAAACAAGAGGTTCT TTCTACACAGCGTTTGCTCTCTAAAAGGATACCAGCTGCCGTTTGTGTAT CGTTCATGTCCGCGAGGGTAGCCGCGTATTTGCCCCTGAAAAATTGACAC CACGAAACGCCGCCGTCCCCGTATCCCCCGGGACCCCGCTCACCATCCTT GTCGCCCCCCCAACTTCACCCCACCGCGCCCCTAGGTTTGGAATCCCTTC TACTCGCCGGGAACCCTCAGCGGCAGATAAGCCCGTCCCTCCTCCAGCGT GGGACCGTCACCACGCTGGCCTACCTACGAGACCGCCTGCCCCCCGACCA CCGGCCCCGCACTCCGATAACGCCTCCACCTGCTCCAAAACCTTTCAATG ATGCCCCCGCCGCCGCCGCTGCCGCTGGGACGGGTAGTAGTACTCATGGT TCCCTAGGCGGCGGGGCGGGGGGTGGGGGTGGGAGTGGGGGCGGGGGGGG AGAGGCAGCGAAGAGGATTGCTTTGTTGACAGCCGAGGTTGAGGCGCTCA GGGAGGAGACGGAGGCGCCGGGCCTCAGTCAGGCCAAGGCCTACGCGTTG AAGAAGAAGCTGCAGATGAAGAGGGCCGCGTTGATTCGCGAGGAGCGGGC GCTTAAGCAGACTCAGCAGGGCGGTGGGAGATGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8119:3600..6383-

>mRNA_Ecto-sp13_S_contig8119.19461.1 ID=mRNA_Ecto-sp13_S_contig8119.19461.1|Name=mRNA_Ecto-sp13_S_contig8119.19461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8119:3600..6383- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGAGTAGTGAGGAGCGCGCTAGAGACGGGCACGCTAGACGTGGAGGG
AAGAGGGATGACTTCGCTGCCTCCGGGGCTGTTCCAGGATGACCGCACGC
TGTCGGCGGTGACCAGGGCCAAGCTTTCCGGCAACAAGCTGCAGACCCTC
CCCGGCGAAATCTCCCGATTCGAAAACCTCACGACCATCGAAGCGGACAA
CAACGGCCTCTCCGCCTTGCCCGGCGCGCTGGCCCGCATGGCCATCTACC
GCCTCTCCCTCCGCCGGAACTCTCTCTCGTCGTCCGCGGCCGTGGAGGCG
TTCTTAGCGCCGCCGGCGATAGCGCCTCCCGGGAGCCTGCCGCTGTCGAT
ATCCATCAGGGAGTTGGACCTGTCGTCCAACGATCTGGGCGAGGTGCCCC
CGGCTATCTTTGCCTGCCGTGGCCTGCAGACGCTAGTCCTGGCCTACAAC
CCCCTGTCGGACATGTCTGGCCTGCCCTGGGCAGCTCTAGGGAGTCTCGA
GACCCTTGACCTCTCGAACAACCGCCTTCGCTCCCTGGGAGACGTTGTCC
TCATGACCTGGTTGCGCCGCCTCAACCTCGAGAACAACGACATTTCTCCG
GTGCCGCTGGAACTCGGCCTGTGTACGGGTTTGGAATCCCTTCTACTCGC
CGGGAACCCTCAGCGGCAGATAAGCCCGTCCCTCCTCCAGCGTGGGACCG
TCACCACGCTGGCCTACCTACGAGACCGCCTGCCCCCCGACCACCGGCCC
CGCACTCCGATAACGCCTCCACCTGCTCCAAAACCTTTCAATGATGCCCC
CGCCGCCGCCGCTGCCGCTGGGACGGGTAGTAGTACTCATGGTTCCCTAG
GCGGCGGGGCGGGGGGTGGGGGTGGGAGTGGGGGCGGGGGGGGAGAGGCA
GCGAAGAGGATTGCTTTGTTGACAGCCGAGGTTGAGGCGCTCAGGGAGGA
GACGGAGGCGCCGGGCCTCAGTCAGGCCAAGGCCTACGCGTTGAAGAAGA
AGCTGCAGATGAAGAGGGCCGCGTTGATTCGCGAGGAGCGGGCGCTTAAG
CAGACTCAGCAGGGCGGTGGGAGATGA
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