prot_Ecto-sp13_S_contig8115.19459.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8115.19459.1
Unique Nameprot_Ecto-sp13_S_contig8115.19459.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length469
Homology
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)

HSP 1 Score: 797 bits (2058), Expect = 1.760e-283
Identity = 428/461 (92.84%), Postives = 437/461 (94.79%), Query Frame = 0
Query:    1 DRIEQVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGEANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE 461
            DRIEQ++RAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRG+IAN+VAGVTAEAGLSKVQT+AIRQAL SRLTLIQGPPGTGKTKTACNL+LSAVRLRQSKGGAR DGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDV+AAKGWVKEVSQS ESSA SEARRPSTTRG     XXXXXXXX             LEAAQL AARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGE++A VGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE
Sbjct:  187 DRIEQMERAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGNIANVVAGVTAEAGLSKVQTRAIRQALESRLTLIQGPPGTGKTKTACNLILSAVRLRQSKGGARRDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVVAAKGWVKEVSQSTESSAASEARRPSTTRGSAGSKXXXXXXXXTPSQSASRRAYAVLEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGESHAGVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE 647          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A6H5L473_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L473_9PHAE)

HSP 1 Score: 702 bits (1812), Expect = 5.160e-249
Identity = 396/494 (80.16%), Postives = 404/494 (81.78%), Query Frame = 0
Query:    1 DRIEQVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQ---------------------LPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGE-----ANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVEVRFSSKG 468
            DRIEQVK+AGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFP PECSRGDIANIVAGVTAEAGLSK  T+AIRQALGSRLTLIQGPPGTGKTKTACNL+LSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDV+AAKGWVKEVSQSAESSA SEARRPST+RG                          LEAAQL AARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQ                     LPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNR                                PAGFPWPAASGPVAFVRVSESGGE     +NA VGGA+RGQLESRGGTEAAVQGGSFASAALGTSYCN+REAEAVAFALELLLREGDVEVRFSSKG
Sbjct:  174 DRIEQVKKAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPRPECSRGDIANIVAGVTAEAGLSK--TRAIRQALGSRLTLIQGPPGTGKTKTACNLILSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVVAAKGWVKEVSQSAESSAESEARRPSTSRGSAGSKPRNSSATTPSQSASRRAYAV-LEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQNSTRPPLFPPLRPRFIGDGPQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRLI------------------------------PAGFPWPAASGPVAFVRVSESGGEREKRESNAGVGGAKRGQLESRGGTEAAVQGGSFASAALGTSYCNLREAEAVAFALELLLREGDVEVRFSSKG 634          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: W7TMD0_9STRA (Regulator of nonsense n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMD0_9STRA)

HSP 1 Score: 261 bits (667), Expect = 3.370e-74
Identity = 172/390 (44.10%), Postives = 219/390 (56.15%), Query Frame = 0
Query:   27 APDAEWARIALGLSRFPGPECSRGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRA------IGG--------DQEGGFSS------IRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGI-RASDRPTPAGFPWPAASGPVAFVRV 395
            A  + W  +A   S  P    +R     IV+   A   L++ Q +A+R AL  +L+LIQGPPGTGKT+TAC+L+  AV+L Q +      GKV+A AFSNVAADNLLEG L LGL A+R+GR AT+RP L + TLDAL+  H  V   K       +  E+  GS AR     +                           LE A+L AA  I+  ADVVV +C+GA N+  + A      +GG        ++   FSS      ++F TV+IDEA+QATE A LVP+ +GC+QLVLVGD  QLPPT+    A   GLG SLF+RL  AGI+P LL  QYRMHP I+ FPS  FY G + +    A  RP P GFPWP  + PVAFV V
Sbjct:  478 ATKSSWEALA---SAVPKTSFARKAADQIVSQEVARFKLNESQERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKLGQRRDA----GKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFK-------KKLEAVRGSTARDVQAAK-------------------------RDLEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGXXXXXXXWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAV 828          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A0U9HIU8_KLENI (RNA helicase nonsense mRNA reducing factor n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HIU8_KLENI)

HSP 1 Score: 246 bits (629), Expect = 1.540e-69
Identity = 159/396 (40.15%), Postives = 214/396 (54.04%), Query Frame = 0
Query:    5 QVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECS--RGDIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVI-AAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSE 397
            QV + GG     G+T  P+ + A    WA          G E    +G +   +A +    G++K Q KAI  A+  RLTL QGPPGTGKT+T  + LL + RL      AR    ++A A SN+A DNLLEG LELGL+ +RIG+P  ++ TL HATL+AL+ +HP +  AA    + V+ SAE+       +    RG                           E A+  A ++++  ADV+V +CIGAG+                   F   VIDEATQAT+ ++LVP++ G   +VLVGDQ QLPPTVI  EA   GL  SLF  L  +G+K  LL+ QYRMHPA++ FPS HFYDG++T+     DRP P  F WP AS P+AF+  S+
Sbjct:  345 QVLQTGGAVDSAGET--PEKMAAKAPPWAS---------GKELGSLKGGVRKQLAKLEERGGVNKSQAKAIEAAMTRRLTLWQGPPGTGKTRTLLHFLLLSTRLL-----AREHKPILACADSNIAVDNLLEGLLELGLKVVRIGQPVKVKATLRHATLEALIADHPQMARAASLRGQSVTASAEARGSRSWSKERQQRGDAAMKAWRAS-----------------EDAEAIAIKEVLDDADVIVATCIGAGDPVL------------EGRTFRVCVIDEATQATQPSSLVPLVGGADNVVLVGDQKQLPPTVISLEAAKAGLEVSLFEELQRSGVKTFLLDTQYRMHPALAAFPSQHFYDGRLTSFPTPEDRPAPKRFAWPDASRPIAFLDCSD 695          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A075FWN5_9EURY (Regulator of nonsense transcripts 1 (UPF1, RENT1) n=8 Tax=root TaxID=1 RepID=A0A075FWN5_9EURY)

HSP 1 Score: 237 bits (605), Expect = 1.180e-67
Identity = 147/332 (44.28%), Postives = 191/332 (57.53%), Query Frame = 0
Query:   65 LSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRV 395
            L++VQ +A R A+ SRLTLIQGPPGTGKT TA  +L         +  A+ D G V+A A SNVA DNLLEG L LG+RA+R+G+P  +R  L  AT+DA +E HP       W++        S    +RR    RG                          +   +      I+  A V+ C+CIG+G++                 RFS V+IDEATQATE AALVP++RG +Q+VLVGD  QLPPTVI   A++GGLG SLF R++  GI+P LL  QYRMHPAIS+FP+  FY+G++  GI ASDR TPAG  WP    P+AF+ +
Sbjct:  200 LNEVQREAARAAMDSRLTLIQGPPGTGKTYTAVRIL---------ENWAKQDIGTVLAVADSNVAVDNLLEGLLSLGVRAVRLGQPVKVRENLREATMDARMEEHPLRRDLDHWLE--------SNEKLSRRVKGMRGKEKGLAHRDLSRGWKE----------VRKIESQMRDDILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQVVLVGDHRQLPPTVISQRAQNGGLGRSLFERMVEIGIEPHLLRVQYRMHPAISEFPNERFYEGRLEDGIAASDRQTPAGLLWPDWECPMAFLPI 492          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A2V3I143_9EURY (Helicase ATP-binding domain-containing protein n=8 Tax=root TaxID=1 RepID=A0A2V3I143_9EURY)

HSP 1 Score: 236 bits (602), Expect = 3.210e-67
Identity = 146/352 (41.48%), Postives = 194/352 (55.11%), Query Frame = 0
Query:   65 LSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGEANASVGGARRGQLE 415
            L+K Q +A   AL  RLTLIQGPPGTGKT T   +L         +  A+ D G ++A A SNVA DNLLEG L LG+RA+R+G+P  +R +L  AT+DA +E HP       W++   +      G + +    T                            +   +      I+  + V+ C+CIG+G++                 RFS V+IDEATQATE AALVP++RG +Q+VL+GD  QLPPTVI   AE+GGL  SLF RL+  GI+P+LL  QYRMHPAIS FP+ HFYD  +  G+ + DRPTPAG  WP    P+AF+ V+  GGE  A  G ++    E
Sbjct:  200 LNKAQREAALAALERRLTLIQGPPGTGKTHTGVRIL---------EAWAKQDPGTILAVADSNVAVDNLLEGLLSLGIRAVRLGQPVKVRESLREATMDARMEEHPLRRDLDHWLESNEKLGRRVKGMKGKEKGLT------------------YRELSRGWKEVRRIESQMRDDILNRSQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQIVLIGDHRQLPPTVISQRAENGGLNRSLFERLVEMGIEPLLLRTQYRMHPAISAFPNGHFYDDLLEDGVTSEDRPTPAGLLWPDWDMPIAFLPVT--GGEVKAPDGASKENPTE 510          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A2E0PQ68_9EURY (AAA domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0PQ68_9EURY)

HSP 1 Score: 232 bits (592), Expect = 9.200e-66
Identity = 139/333 (41.74%), Postives = 192/333 (57.66%), Query Frame = 0
Query:   64 GLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRV 395
            G+++ Q  A + AL  RLTLI GPPGTGKT TA  +L S          A+ D G V+A A SNVA DNLLEG L+ G+RA+R+G+P  +R  L  AT+DA +E+H      +  V+E+ ++ + S   +  R    +G                          +   +     +I+  A V+ C+CIG+G++                 RFS V+IDEATQATE A LVP++RG +Q+V+VGD  QLPPTV+   AE+GGL  SLF RL+  G+  ILL+ QYRMHP+IS+FP+ HFYDG++  GI AS+RPTP+G  WP    PV F+ +
Sbjct:  199 GMNEAQRLATQSALSCRLTLIHGPPGTGKTHTAVRILES---------WAKQDLGSVLAVADSNVAVDNLLEGLLDRGVRAVRLGQPVKVRENLRQATIDARMESHE---LNRDLVEEIERNEKLSRKIKGMRGGKEKGLAHRDLSRGWKE--------------VRRIERQIRDEILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPATLVPLVRGARQVVMVGDHKQLPPTVVSRRAENGGLTRSLFERLVDMGVSTILLDTQYRMHPSISEFPNSHFYDGELMDGIEASERPTPSGLLWPDWDIPVCFIPI 493          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A520UNT6_9ARCH (AAA domain-containing protein (Fragment) n=1 Tax=Candidatus Poseidoniales archaeon TaxID=2163009 RepID=A0A520UNT6_9ARCH)

HSP 1 Score: 232 bits (591), Expect = 9.990e-66
Identity = 141/338 (41.72%), Postives = 188/338 (55.62%), Query Frame = 0
Query:   59 VTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWD-GKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRV 395
            V+  + L++ Q +A + A+ SRLTLIQGPPGTGKT TA  +L         +  A+ D G V+A A SNVA DNLLEG L LG+RA+R+G+P  +R +L  AT+DA +E HP       W++   + +    G + +                                 +   +      I+  A V+ C+CIG+G++                 RFS V+IDEATQATE AALVP++RG +Q+VLVGD  QLPPTVI   A  GGLG SLF R++  GI P LL  QYRMHPAIS FP+ HFY+G++  G+  SDR  PAG  WP    P+AF+ V
Sbjct:  283 VSLASDLNEAQREAAKAAVDSRLTLIQGPPGTGKTHTAVRIL---------EAWAKQDIGTVLAVADSNVAVDNLLEGLLSLGVRAVRLGQPVKVRESLREATMDARMEEHPLRRDLDHWLESNEKLSRRVKGMKGKEKGLAH------------------RDLSRGWKEVRKIESQMRDDILDRAQVLCCTCIGSGHELL------------DGRRFSRVLIDEATQATEPAALVPLVRGARQIVLVGDHRQLPPTVISRRAGSGGLGRSLFERMVEIGISPHLLRIQYRMHPAISAFPNEHFYEGKLEDGVEVSDRVAPAGLLWPDWECPIAFLPV 581          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A0G4FCG3_VITBC (SAP domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FCG3_VITBC)

HSP 1 Score: 239 bits (611), Expect = 1.050e-65
Identity = 152/367 (41.42%), Postives = 205/367 (55.86%), Query Frame = 0
Query:   69 QTKAIRQALGSRLTLIQGPPGTGKTKTACNLLLSAVRLRQSKGGARWDG---------------------KVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQ-------------SAESSAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAQLAAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQ-EGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGG 400
            Q +A+R++L  R+TLIQGPPGTGKT+T+C LL S V L ++   AR  G                     KV+A AFSNVAADNLLEG +++G++A+R GR   + P L + T+DA+V+ HP+  AA    +E  Q             S E  A S+A+     R                           ++ A+  A   I+  ADVVV S I AG           + +     ++FSTV+IDEA+Q TE AA VP+++GC+QL+LVGDQNQLP TV+  +A+  GL  SLFSRL+ AG+ P++L  QYRMHPAI+ FPS  FYD ++ +  +  +RPTP GFPWP    PVAFV V E  G
Sbjct:  653 QEEAVRRSLTQRVTLIQGPPGTGKTRTSCLLLGSIVALMKA---ARAQGIQPCGDLPAALSATGPPPRIEKVLAAAFSNVAADNLLEGLIKMGVKAVRSGRALVVNPALKNYTVDAMVDQHPEYRAALAHEREARQRRQQLYRAHQDDTSDEDKAASQAKLDEANR-------------------LLRLAEEDVKVAEQRAIYDIVTKADVVVTSAISAGQPGLTSTTQVPEWDTQRVPVKFSTVLIDEASQVTEPAASVPMVKGCEQLILVGDQNQLPATVVSDKAKAEGLNLSLFSRLVLAGVVPVMLAAQYRMHPAIAMFPSFEFYDDRLISIPKPEERPTPGGFPWPDDVKPVAFVSVMEPAG 997          
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Match: A0A0G4HN17_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HN17_9ALVE)

HSP 1 Score: 239 bits (611), Expect = 1.140e-65
Identity = 170/441 (38.55%), Postives = 228/441 (51.70%), Query Frame = 0
Query:   65 LSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLL------LSAVRLRQSKGGARWDG------------------------KVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAES----SAGSEARRPSTTRGXXXXXXXXXXXXXXXXXXXXXXXXXXLE-------AAQLAAARQIIKGADVVVCSCIGAGNDAFVRAI---GGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGEANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVE 461
            L   Q  A+R AL  RLTLIQGPPGTGKT+T+C +L      +   RLR  +   R++                         K++A AFSNVAADN+LEG L++G++A+R+GR   + P L++ T DALV  HP+V AA   ++EVS  A          + + P   +G                          +         A+  A  +I+  ADVVV SC+GAG   FV A+   G D E   S I FSTV++DEA+Q TE AALVP++ G +Q++LVGDQNQLPPTV     ++  L  SLF RL+ AG+KP +L RQYRMHP I+ FPS  FY G++ +  +A DRP P G  WP  + PV    V++                LESR    A  +GG        TSY N REA  +   L  LL EG+++
Sbjct: 1488 LDPSQDVAVRAALSRRLTLIQGPPGTGKTRTSCLILGTLAQMMRTARLRGHEPVNRFEKLFTIESKEKEQALRSIPPQPPKLEKILAAAFSNVAADNILEGLLKMGVKAVRVGRSNVVNPLLYNYTADALVRQHPEVKAAVRHLREVSDRARELRLFGMKPDEKGPLLPQGVARNETEELLTFKEKEFARKKKMQEHVRLAEEDVRVAEKRALWRIMASADVVVSSCMGAGKVDFVNALECPGWDPER--SPISFSTVLLDEASQVTEPAALVPLVTGAEQVILVGDQNQLPPTVTTESVKEKCLDVSLFVRLVLAGVKPFMLGRQYRMHPVIAAFPSAQFYGGKLESVPKAEDRPAPRGVLWPDRNAPVMMAAVTDE------------TLHLESR----ADWKGGGDT-----TSYQNKREATVILQLLRSLLAEGEIK 1905          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8115.19459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK70_ECTSI1.760e-28392.84tRNA-splicing endonuclease positive effector n=1 T... [more]
A0A6H5L473_9PHAE5.160e-24980.16AAA_11 domain-containing protein n=1 Tax=Ectocarpu... [more]
W7TMD0_9STRA3.370e-7444.10Regulator of nonsense n=2 Tax=Monodopsidaceae TaxI... [more]
A0A0U9HIU8_KLENI1.540e-6940.15RNA helicase nonsense mRNA reducing factor n=1 Tax... [more]
A0A075FWN5_9EURY1.180e-6744.28Regulator of nonsense transcripts 1 (UPF1, RENT1) ... [more]
A0A2V3I143_9EURY3.210e-6741.48Helicase ATP-binding domain-containing protein n=8... [more]
A0A2E0PQ68_9EURY9.200e-6641.74AAA domain-containing protein n=1 Tax=Euryarchaeot... [more]
A0A520UNT6_9ARCH9.990e-6641.72AAA domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A0G4FCG3_VITBC1.050e-6541.42SAP domain-containing protein n=4 Tax=Vitrella bra... [more]
A0A0G4HN17_9ALVE1.140e-6538.55Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 347..465
e-value: 6.4E-13
score: 50.4
NoneNo IPR availableGENE3D3.40.50.300coord: 44..342
e-value: 7.5E-63
score: 214.6
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 57..456
NoneNo IPR availablePANTHERPTHR10887:SF463coord: 57..456
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 65..316
e-value: 2.3E-44
score: 152.2
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 326..461
e-value: 5.1E-17
score: 62.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 64..404

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8115contigEcto-sp13_S_contig8115:14..7066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8115.19459.1mRNA_Ecto-sp13_S_contig8115.19459.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8115 14..7066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8115.19459.1 ID=prot_Ecto-sp13_S_contig8115.19459.1|Name=mRNA_Ecto-sp13_S_contig8115.19459.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=469bp
DRIEQVKRAGGVQPGVGDTALPQGVVAPDAEWARIALGLSRFPGPECSRG
DIANIVAGVTAEAGLSKVQTKAIRQALGSRLTLIQGPPGTGKTKTACNLL
LSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPA
TIRPTLWHATLDALVENHPDVIAAKGWVKEVSQSAESSAGSEARRPSTTR
GSAGSKPRNSSATTTPSQSASRRAYAVLEAAQLAAARQIIKGADVVVCSC
IGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQ
QLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMH
PAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGG
EANASVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFA
LELLLREGDVEVRFSSKG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041677DNA2/NAM7_AAA_11
IPR041679DNA2/NAM7-like_AAA
IPR027417P-loop_NTPase