mRNA_Ecto-sp13_S_contig8111.19454.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8111.19454.1
Unique NamemRNA_Ecto-sp13_S_contig8111.19454.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: D7G7C0_ECTSI (Conserved oligomeric Golgi complex subunit 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C0_ECTSI)

HSP 1 Score: 626 bits (1614), Expect = 2.670e-217
Identity = 356/427 (83.37%), Postives = 361/427 (84.54%), Query Frame = 1
Query:    1 MIASATAAVGAREGDHAEQEQEPVELSEAYVHSLASLGLERLQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMERHLASLLAEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGETAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILSLEEKTEKKKQRQRALARQADADVKGSPLENSSG-----SKREVAAMGSAKIGGGGVSQRQLALVEMKLQVDFLEARDAWLADAASRAGGHGXXXXXXXXXXXXXLGAAANTASSGPYQALMDLIESCRSQWFEVATQFRAIFLSVEGSGGGSATAARQSAVSSPRVGEGLATGSGRD 1266
            M ASATAAV AREGDHAEQEQEPVELSEAYVHSLASLGLERLQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEME HLASLL EVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQ   LVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGG+TAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEIL+LEEKTEKKKQRQRALAR+AD D KGSPL+NS       SKREVAAMG+AKIGGGGVSQRQLALVEMKLQ                                                 ALMDLIESCRSQWFEVATQFRAIFLSVEGSGGGSATAARQSAVSSPRVGEGL TGSGRD
Sbjct:    1 MSASATAAVAAREGDHAEQEQEPVELSEAYVHSLASLGLERLQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMEGHLASLLTEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQ---LVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGDTAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILALEEKTEKKKQRQRALARKADVDAKGSPLKNSXXXXXXXSKREVAAMGAAKIGGGGVSQRQLALVEMKLQ-------------------------------------------------ALMDLIESCRSQWFEVATQFRAIFLSVEGSGGGSATAARQSAVSSPRVGEGLTTGSGRD 375          
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: A0A836CL87_9STRA (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL87_9STRA)

HSP 1 Score: 205 bits (521), Expect = 7.000e-57
Identity = 120/224 (53.57%), Postives = 146/224 (65.18%), Query Frame = 1
Query:   97 SLASLGLERLQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMERHLASLLAEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVR-----SDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGETAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILSL 753
            SLASLGL RLQ+EP RL  EA AVDEALH LSLD YRVFI NQ+CVRH++ +G +M +H+ +L   + GL   F+ FQ+EAAEL+ GH+RN+QTL HHMQ   LVELLE+PQLMD CVR     S   E+AL++A F   L  RH                 T    EP    +P VI +I EEV +S R L+ R++A LRG   L SCLQVVSCLRRLE+L L
Sbjct:    3 SLASLGLARLQDEPLRLEDEARAVDEALHDLSLDQYRVFIVNQDCVRHMKLKGADMAQHIRALEEGLEGLAGGFTTFQKEAAELLAGHRRNKQTLAHHMQ---LVELLEIPQLMDTCVRNSGADSAFAEDALALAGFTQGLLARHMRT--------------TDGSSEP---QVPAVIALIAEEVAKSLRSLRSRMLASLRGNASLASCLQVVSCLRRLELLQL 206          
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: W7TN52_9STRA (Conserved oligomeric Golgi complex subunit 8 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN52_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.470e-49
Identity = 142/367 (38.69%), Postives = 195/367 (53.13%), Query Frame = 1
Query:  124 LQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMERHLASLLAEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGETAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILSLEEKTEKKKQRQRALARQADADVKGSPLENSSGSKREVAAMGSAKIGGGGVSQRQLALVEMKLQVDFLEARDAWLAD-------AASRAGGHGXXXXXXXXXXXXXLGAAANTASSGPYQALMDLIESCRSQWFEVATQFRAIFLS--VEGSGGGSAT 1197
            L  EP  L  EA  V + L  L   HY   I+N EC+  ++ +G E +  L +L  EV GL      F   A  +VG  KRNRQT +HH+Q   LVELLEVPQ+MDAC+R+ L +EA+ +  FA+TLERRH   R +  A   S     +  DE   G    VI  +V+E+R   R L+ERLV +LR PIQL  CLQ++SCLR+L+ L+L+ +++  ++RQ +L+  A A V    +    G+  +V+                   +E +LQ +FL+ARDAWL          AS A GHG             +G A           LM +IE+ R+ WFE+ TQFRAIFL   +E SG  S+T
Sbjct:   10 LHKEPELLRQEATRVQQTLEALYRSHYTTIIENYECMTFIQERGTEFQADLTALQEEVGGLKEACGPFTAGAQAIVGDLKRNRQTFQHHLQ---LVELLEVPQVMDACLRNGLYDEAVEVVAFANTLERRHL--RSLEQADPYSNSKSRSMFDEGGRGKHTVVIAGLVQELRVLQRQLRERLVYQLRLPIQLPRCLQIISCLRKLDGLALDARSQGPRKRQLSLSA-APATVNRGRI----GAAHDVSGHDE---------------LEKELQTEFLDARDAWLQSELEQGRSGASGARGHG-------------VGVAD----------LMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSST 328          
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: A0A7S2V501_9STRA (Conserved oligomeric Golgi complex subunit 8 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V501_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.160e-42
Identity = 131/320 (40.94%), Postives = 163/320 (50.94%), Query Frame = 1
Query:  325 FQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGETA---------------AKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILSLEEKTEKKKQRQRALARQADADVKGSPLENSSGSKREVAAMGSAKIGGGGVSQRQLALVEMKLQVDFLEARDAWLADAASRAGGHGXXXXXXXXXXXXXL----------GAAANTASSG--PYQALMDLIESCRSQWFEVATQFRAIFLSVEGSGGGSATAA 1203
            F  EA  L+G HKRNRQT +HH+Q   LVELLEVPQLMDACVR+ L EEALSIA FASTLERRHR    +P A   S  G+                 + D+  E     VI +IV E+R S   L+E++V +L   IQL +CLQVVSCLRRL+ L L+      +Q   AL  Q              G     AA  S  +GG  + Q   A +E++LQV FLEARDAW+  +  +                  +          G  +  A  G  PYQ L D +E  R+  FE+ATQF+AIF     S   SATAA
Sbjct:    4 FSSEATVLLGRHKRNRQTGQHHLQ---LVELLEVPQLMDACVRNGLYEEALSIAQFASTLERRHR----LPIAGPASASGKPMXXXXXXXXXXXXXXXSADKGAEEKGQEVIGIIVREIRSSVVALREKMVQQLSSQIQLPTCLQVVSCLRRLDTLELD------RQHYHALITQG-------------GGSSGKAAPASGAVGG--IEQ---AALELRLQVQFLEARDAWVQASLDQLDAQAGFSSDRLRQHLRLVRMRKMHPDQGGGESAAAGLGFQPYQYLTDAVEKNRTLCFEIATQFKAIFCGSADSSTASATAA 292          
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: A0A2R5G6G5_9STRA (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6G5_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.490e-35
Identity = 121/396 (30.56%), Postives = 193/396 (48.74%), Query Frame = 1
Query:   25 VGAREGDHA---EQEQEPVELSEAYVHSLASLGLERLQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMERHLASLLAEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVG--------------SVGGETAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILSLEEKTEKKKQRQRALARQADADVKGSPLENSSGSKREVAAMGSAKIGGGGVSQRQLALVEMKLQVDFLEARDAWLADAASRAGGHGXXXXXXXXXXXXXLGAAANTASSGPYQALMDLIESCRSQWFEVATQFRAIF 1161
            V A EG  A   E E +  E +     ++  LG+  L  EP RL A   A+D  + +LS+ HY V IQ+ + V  V    K    + A +   +  L      F+     +   H RNRQTL  H+Q   L+ELL++PQLMD C R++L +EAL +A+FA+TL+ RHR+     + P                S     + ++ P  G    +I MI  +V  SA+ ++++++ +LR  I L +CL+++S L+RL+     ++  ++   Q  ++    A V G+   ++SGS    +A  +     G  +Q      E+ L+ +FL+ RDA++   A+                      AA T  S PYQ+ + LIE CR  WF+V TQ++AIF
Sbjct:    7 VRAEEGPEAAAAEAEAKDGEAAGFLASAIGRLGMGELNAEPRRLQASIEAIDAEMKSLSVKHYGVHIQSAKGVAAVANGCKRTAGNAARIQESLGQLSTSLEQFRSIGQRVADAHARNRQTLDKHVQ---LLELLQIPQLMDTCSRNNLFDEALDLASFANTLQWRHRALATTHAGPEADADPAAQRFSSGDVSASARQSKREAPFSGGT-AIIDMIAGDVNASAQHMRKQMLQQLRQQINLPTCLRIISLLKRLDA----QERVRRNAAQNQVSEGPAATVAGATAASTSGSSNGESAHTTRP---GASAQAD----EIHLRFEFLDCRDAYIRSLATED-------------------MAAYT--SRPYQSSLKLIERCRVNWFDVITQYKAIF 366          
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: A0A7R9U5L5_9STRA (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5L5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.100e-29
Identity = 101/314 (32.17%), Postives = 157/314 (50.00%), Query Frame = 1
Query:   97 SLASLGLERLQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMERHLASLLAEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRH------------RSRRVVPSAPV-GSVGGETAAKDEPIEGHLPG-----VIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILSLEEKTEKKKQRQRALARQADADVKGSPLENSSGSKREVAAMGSAKIGGGGVSQRQLALVEMKLQVDFLEARDAWLADA 984
            +  S+GL++L++EP RL  EA  +D  L  L+L++++VF+Q+++C   V ++ +++      L   + GL  + +VF   +  L+  ++ NR T+ HH+    L++LLE+PQLMDAC+R+++ + AL +   A  LE+RH                    AP  G  G +  A+  P            V++ + +EV   A  L+ RL+  LR    L   L+ V  LR L   SLE    K  QR   L R+ D    GS          EV A GS + G     + Q   +E ++Q+DFLEARDAWL  A
Sbjct:   28 AFGSMGLQKLKSEPSRLRNEANVMDSRLTQLALENHKVFVQHRDCTAFVSSRHEQLGEATKVLREALGGLSTDAAVFTASSKILLREYQTNRLTMHHHLS---LLDLLELPQLMDACIRANMFDAALQLMHKAHQLEQRHLYLHRTYGPTLSTQEEADSQAPKDGEEGAKAKAEATPERSATKRPTGIVVVRQVAQEVEALAEELRSRLLQVLRTSCPLNELLEAVGSLRTLMGYSLERA--KYLQRHEELMRKVDRARDGS----------EVTAEGSNEAGAEVTRKLQNVALEARIQIDFLEARDAWLKSA 326          
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: B5YMK7_THAPS (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMK7_THAPS)

HSP 1 Score: 130 bits (328), Expect = 2.740e-29
Identity = 98/275 (35.64%), Postives = 136/275 (49.45%), Query Frame = 1
Query:  340 AELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGETAAKDEPIEGHLPG-VIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILSLEEKTEKKKQRQRALARQADADVKGSPLENSSGSKREVAAMGSAKIGGGGVSQRQLALVEMKLQVDFLEARDAWLADAASRAGGHGXXXXXXXXXXXXXLGAAANTASSGPYQALMDLIESCRSQWFEVATQFRAIF 1161
            A+L   H+  R+TL  H     L+ELLE+P LMDACVRS L E+ALSIA FA+TLERRH       SA VG    +T  +++  E H  G V+  +V E+R     L+ +L+ +LRG + +  CL+VV+ LRRL  + LE + +             D D+                             +   A +EM+LQVDFLEARDAWL    ++ G                LG    + SS   + ++D IE  R++ FE+ TQF AIF
Sbjct:  108 ADLAEKHRLRRRTLMQHSS---LLELLELPSLMDACVRSSLYEDALSIAGFANTLERRHLMETSGASAAVGQPEAKTG-EEQAAEQHKKGDVVAGVVSEIRRREADLRRQLIHRLRGDVTMPQCLEVVTALRRLNGVELEHRGKTS----------TDHDL-----------------------------ESVHAAMEMRLQVDFLEARDAWLEGGIAKVGS---------AQAAISLGDKGGSGSSTQAEQILDGIERYRTRCFEIVTQFLAIF 330          
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: A0A7S2SW00_9STRA (Conserved oligomeric Golgi complex subunit 8 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW00_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.250e-28
Identity = 105/330 (31.82%), Postives = 149/330 (45.15%), Query Frame = 1
Query:  214 IQNQECVRHVRAQGKEMERHLASLLAEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGETAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILSLEEKTEKKKQRQRALARQADADVKGSPLENSSGSKREVAAMGSAKIGGGGVSQRQLALVEMKLQVDFLEARDAWL-ADAASRAGGHGXXXXXXXXXXXXXLGAAANTASSGP-------------YQALMDLIESCRSQWFEVATQFRAIF 1161
            I N +CVR +  +GK +      +  E+     +   F   A  ++  HK NRQTL+ HMQ   +++LLE+PQLMDACVR+ L E AL IA FA+ LERRH   R   ++      G               V++ ++ E+R S  GL+   + +LRG + L +CL +V+ LRRL+ L+LE++                                     GS ++     + R    +E+KLQ+D+LE R AWL A+  S                          ASS P             +Q LM L E  R+ WFEVATQFRAIF
Sbjct:    1 IANHDCVRALAREGKAVGEAHQLVNDELEAFKGDAESFMSAATTVMARHKLNRQTLQQHMQ---ILDLLELPQLMDACVRNGLSEAALDIAAFANILERRHARHRAGENSGTAMRQGTR-------------VVQSVIAEIRRSMAGLRSSFMKQLRGRLDLPTCLNIVAHLRRLDSLALEQRFPP----------------------------------GSQEL-----TPRIQEAMELKLQLDYLEGRTAWLHAELES------IELKSIPMIGLLPKETTDQAASSSPEEIASDSGGQNAVFQYLMALFERHRTIWFEVATQFRAIF 269          
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: A0A7S2RIQ2_9STRA (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RIQ2_9STRA)

HSP 1 Score: 128 bits (321), Expect = 2.290e-28
Identity = 101/370 (27.30%), Postives = 168/370 (45.41%), Query Frame = 1
Query:   79 SEAYVHSLASLGLERLQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMERHLASLLAEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGETA-------AKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILSLEEKTEKKKQRQRALARQADADVKGSPLENSSGSKREVAAMGSAKIGGGGVSQRQLALVEMKLQVDFLEARDAWLADAASRAGGHGXXXXXXXXXXXXXLGAAANTASSGPYQALMDLIESCRSQWFEVATQFRAIFLS 1167
            S+ ++ ++   G   L  EP RL      +D  ++TLS++HY V I N  C+  +    +   +    +   +  L  E   F+    ++   + RN QT+ H++Q   L+ELLE+PQLMD C R++L +EAL + ++ STL++RH +   + +  + S  GE         A+  P  G    +I +I EEV ESA  ++++L+ +LR  I   +CL+++S LRRL+                      +  V+ + L                       SQR     E   + +FL+ RDA++    +                        ++  S PYQ+ + LIE CR  WF++ TQ+RAIF S
Sbjct:   32 SDGFISAIGRRGFGDLDKEPKRLQETIEQIDHDINTLSIEHYDVHIHNARCLDAIEQGCETCVKDTVGVRDVLPELAGELKRFRNVGRKISEAYSRNLQTMDHYVQ---LLELLEIPQLMDTCARNNLYDEALHLFSYVSTLQKRHLA---ISNIDLESSKGELERPEDEEQAEKHPYSGGT-SIINVIAEEVYESAAHMRKQLLQQLRQQINYPTCLRIISFLRRLD---------------------REDRVRRNHLST---------------------SQRD----EYHFRFEFLDCRDAYIKSLTTED---------------------QSSYYSRPYQSSLKLIERCRVNWFDIITQYRAIFAS 327          
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Match: A0A6J8BXY1_MYTCO (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BXY1_MYTCO)

HSP 1 Score: 119 bits (297), Expect = 2.670e-27
Identity = 72/221 (32.58%), Postives = 112/221 (50.68%), Query Frame = 1
Query:   88 YVHSLASLGLERLQNEPGRLHAEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMERHLASLLAEVHGLGAEFSVFQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGETAAKDEPIEGHLPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILS 750
            Y+  L+S G+ +L  EP RL  E   + +    L+  HY+ FIQ  EC R +    + +E+H+ +LL  +  L  E  V  ++A E+    + N  TL+ H Q   L+E+LE+PQLMD CVR+   EEAL +A     LE++H S                             VI  IV EV+ S + +   L+ +LR  +QL +CL+V+  LRR+++ +
Sbjct:   31 YLSELSSYGVSKLSMEPDRLSDEKSQILQETQNLAFTHYKTFIQTAECSREIFEDFQIIEKHVDNLLQNLPSLSEECEVVTKQAQEINSSRRMNNLTLQRHTQ---LLEVLEIPQLMDTCVRNGYFEEALELAAHVKRLEKKHSSI---------------------------SVINNIVNEVKNSTQLMLNHLIQQLRTNVQLPACLRVIGYLRRMDVFT 221          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8111.19454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7C0_ECTSI2.670e-21783.37Conserved oligomeric Golgi complex subunit 8 n=2 T... [more]
A0A836CL87_9STRA7.000e-5753.57Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
W7TN52_9STRA1.470e-4938.69Conserved oligomeric Golgi complex subunit 8 n=5 T... [more]
A0A7S2V501_9STRA2.160e-4240.94Conserved oligomeric Golgi complex subunit 8 (Frag... [more]
A0A2R5G6G5_9STRA3.490e-3530.56Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
A0A7R9U5L5_9STRA1.100e-2932.17Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
B5YMK7_THAPS2.740e-2935.64Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
A0A7S2SW00_9STRA1.250e-2831.82Conserved oligomeric Golgi complex subunit 8 (Frag... [more]
A0A7S2RIQ2_9STRA2.290e-2827.30Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
A0A6J8BXY1_MYTCO2.670e-2732.58Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8111contigEcto-sp13_S_contig8111:464..6257 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score629.4
Seed ortholog evalue1.2e-177
Seed eggNOG ortholog2880.D7G7C0
Preferred nameCOG8
Model size1272
KEGG koko:K20295
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006891,GO:0007275,GO:0007548,GO:0008104,GO:0008150,GO:0008406,GO:0009653,GO:0009887,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0017119,GO:0022414,GO:0030334,GO:0031090,GO:0031984,GO:0032258,GO:0032501,GO:0032502,GO:0032588,GO:0032879,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035262,GO:0040012,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045137,GO:0045184,GO:0046907,GO:0048193,GO:0048513,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051270,GO:0051641,GO:0051649,GO:0061458,GO:0061919,GO:0065007,GO:0070727,GO:0071702,GO:0071705,GO:0072665,GO:0098588,GO:0098791,GO:0099023,GO:2000145
Exons8
EggNOG free text desc.intra-Golgi vesicle-mediated transport
EggNOG OGsKOG2069@1,KOG2069@2759
Cds size1272
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8111.19454.1prot_Ecto-sp13_S_contig8111.19454.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8111 464..6257 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464083.912778-CDS-Ecto-sp13_S_contig8111:463..6371681464083.912778-CDS-Ecto-sp13_S_contig8111:463..637Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8111 464..637 +
1681464083.9270265-CDS-Ecto-sp13_S_contig8111:1517..17481681464083.9270265-CDS-Ecto-sp13_S_contig8111:1517..1748Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8111 1518..1748 +
1681464083.9390016-CDS-Ecto-sp13_S_contig8111:2703..28521681464083.9390016-CDS-Ecto-sp13_S_contig8111:2703..2852Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8111 2704..2852 +
1681464083.9507651-CDS-Ecto-sp13_S_contig8111:3329..33821681464083.9507651-CDS-Ecto-sp13_S_contig8111:3329..3382Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8111 3330..3382 +
1681464083.9627614-CDS-Ecto-sp13_S_contig8111:3687..37941681464083.9627614-CDS-Ecto-sp13_S_contig8111:3687..3794Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8111 3688..3794 +
1681464083.9750533-CDS-Ecto-sp13_S_contig8111:4625..48531681464083.9750533-CDS-Ecto-sp13_S_contig8111:4625..4853Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8111 4626..4853 +
1681464083.9871328-CDS-Ecto-sp13_S_contig8111:5590..57371681464083.9871328-CDS-Ecto-sp13_S_contig8111:5590..5737Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8111 5591..5737 +
1681464084.000162-CDS-Ecto-sp13_S_contig8111:6074..62571681464084.000162-CDS-Ecto-sp13_S_contig8111:6074..6257Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8111 6075..6257 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8111.19454.1

>prot_Ecto-sp13_S_contig8111.19454.1 ID=prot_Ecto-sp13_S_contig8111.19454.1|Name=mRNA_Ecto-sp13_S_contig8111.19454.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=424bp
MIASATAAVGAREGDHAEQEQEPVELSEAYVHSLASLGLERLQNEPGRLH
AEAIAVDEALHTLSLDHYRVFIQNQECVRHVRAQGKEMERHLASLLAEVH
GLGAEFSVFQREAAELVGGHKRNRQTLKHHMQARLLVELLEVPQLMDACV
RSDLMEEALSIATFASTLERRHRSRRVVPSAPVGSVGGETAAKDEPIEGH
LPGVIKMIVEEVRESARGLQERLVAKLRGPIQLTSCLQVVSCLRRLEILS
LEEKTEKKKQRQRALARQADADVKGSPLENSSGSKREVAAMGSAKIGGGG
VSQRQLALVEMKLQVDFLEARDAWLADAASRAGGHGGGADLQQQQQQQAL
GAAANTASSGPYQALMDLIESCRSQWFEVATQFRAIFLSVEGSGGGSATA
ARQSAVSSPRVGEGLATGSGRDR*
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mRNA from alignment at Ecto-sp13_S_contig8111:464..6257+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8111.19454.1 ID=mRNA_Ecto-sp13_S_contig8111.19454.1|Name=mRNA_Ecto-sp13_S_contig8111.19454.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5794bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8111:464..6257+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATTGCTTCCGCTACTGCTGCTGTGGGAGCAAGGGAGGGCGACCATGC GGAACAGGAACAGGAACCGGTGGAGCTCTCCGAGGCGTACGTTCACTCGC TGGCTTCCCTTGGCCTGGAGCGTCTGCAAAACGAGCCCGGACGCTTGCAC GCCGAGGCGATAGCTGTCGACGAGGTTAGTCCTCCTGAAGGATCGGAGAT GTTCCATTTCAATCACTGACTGCTAATATTTAGCCCCGCCGACGCCACCG CCGCAGGAGCAGGAGCTTCCCTTGTTTCCGACGCACGCTCGTGCCCGTGC GTGGTGTGTGCAGTAAAAAAATCGGCAGATACTTCGCTGCCTCTTCGATG TCTATATTCTTCAAGCACAGGCCTGTGTGTGCTTGTACACTCCAACACTA CGGCATGTAGTCTAGGGATTCTGAAAATGCTTTTATGAGAAAGAAAGAAC GCTCTCCTCTCACGTCTTTACGTACGCCGTAGATATTGCCACTGGTGCTG TTGCTGTGTTTGTGGACATCCGCCTGTCCGTACGAAAATGCTTTTATGAG AAAGAAAGAACGCTCTCCTCTCACGTCTTTACGTACGCCGTAGATATTGC CACTGGTGCTGTTGCTGTGTTTGTGGACATCCGCCTGTCCGTACGGGTGC GTGCCGTGGGCACTTGTTTTACTCGGCACGTCATGCCAAACGTAGCAGCA GTATGTAGCAACAGCATGTGGGTAACCAACAAGGCCATGGAGGCCAAGAG GTCCTCTCTCCCTGGTTGGATCCTAAGCTCGTGGGCATGGTCCATGTCCT GCTGTAGTCACGCGGCAAATGCGGAGAAATTCAACCACACGCATGTTCTG CCTGCGTTTTCAGCAGGAGGAAGCGCCCGGGATACTGCCTGGTTTGTATC CTGACAGATATATAGCGATCGGTCCTGTGGGAACAATGCTCCGTCCTCTC GAGGACGCGTGGTCAATGGTCTACTGCAACAACCTTAGATGGCGTGCAAC ACATGATTACCCCAACCCCCTCCCCCATACCCGCTTCGCACCCCTATGCG GCAGGCTCTGCACACGCTCAGCCTCGACCACTACAGAGTTTTCATACAGA ACCAGGAGTGCGTTCGGCACGTGCGGGCGCAGGGGAAGGAGATGGAGCGG CACCTGGCGTCGCTGCTAGCGGAGGTCCACGGGCTGGGCGCGGAGTTCTC CGTTTTTCAGAGGGAAGCGGCGGAACTCGTGGGAGGGCACAAGAGGAACA GGCAGACCCTCAAGCACCACATGCAGGCACGTTTAGTGGCTGAGTACATG GATCAGCAGCGCCGGGCGGTTTTGCTCTCAACAAAATGCGGCTCTTTGTC ACCATTTTGTTTGTCATTCTGTTCCGTTGGCAACGGGTGTCTTTGCGTAG TGGTAGAGCTAGAGTTGACATGGTGAACCTCCCATGGGAGGTAGCTGTAT CTCGTTCCTACCGGAGTTGTTCAACCTGGCATATTTGACCTTTGAGTTTT ATCGTCTGTCATTTTACTACATCAACTTTACCAAATTACCGGTGCTCCTT TTCGTTCCAGGAGGCTCGCGCAATGCCGTGTACTACAAGCAACCCCCCCC CCGTGCCCCTAGGAAGTGGGGTACATATCAGCGAATGTTCCGAAGCGGCA AGGGCACTGTTTACACTTTCTCCTCTAGCATGAGCGTGTTGAGTCTGTTC GGACGGAGCGATTAGAAACTTGAACTTTTCTGAACCCTTCTGGCCACAAG AGTTGCGCGCATGTGGTCTATGGCACAGATAACTTGTTCTGCGGGACCCT CAGTGGAGAAGGCGAATTTGCACGGAATAGGTAGATACTGCCAGCCATGG CAACGTCATGAGCACGGTGTTGTCTGCGCAATTCGTTCCGGCCGGCCTTG CCTTGAAATCCGACGTGCGACTTCGCTGCGGTACATACGGTTCGAATGTC TCACCCCTCACTCCTCTCATGTTCCGAATCCCTAACACACGAGTAATAAA CAGGGGACGCACCACCTCACACGCGCAAAGAGACGGTAGAGGTTGTGTGC GACGCAACTGCTGCTGTTCTCGCCCGTGGCAGACGGCGACCATACTCATG GTTTGCAATTCGCACTGGTGCAAGAATCATCATCAGACGAAACGTCATTT GCAAGTGGCGCTCTTTCGCGTCGCCGCTCACATGATTTTGTGCATCCACG CGCATTGTTTGAAAACGCGTTTTGACGCTTCGCACGGCAGCTGGTCGAGC TGCTGGAGGTGCCGCAGCTGATGGACGCGTGCGTGCGCAGCGACCTGATG GAGGAAGCTCTCTCCATCGCCACCTTCGCCTCTACCCTGGAGAGGCGGCA CCGGAGTCGCCGAGTGGTGCCATCCGCGCCCGTCGGCAGGTGAGGCAGAG ACTACGCCGGAGTTGCACGATATTCCCGGCCGTTTGGTGTCGACATGCAT GATTGTTTTGGTTGTTGTTTGTCGGAGTGGGGCGTCTTTCCTATTGGAGT GTGAAGAAGTAGCGACATCGAGTTTGTTGGAGGAAGTACTCCCGTCAGTG GGGAATGGGCACGGGGGGGGTTGTATAGGCGCGCTGTTGTTATTTTTGGC GTCAGCGTTCTGAAGAAAAAGAGGCACACCGGAACATCCAACCGAGTGAC GCAAGGAACGCCCCACCCGTGTCAATAAACTCGTTTAGATCTATTCAAGG TGGTGGCTCCTTCGGAAGGGGCGAAGGGGAGGGATCGTTATAGCACCATG AGGTGTTGGTTAATGAGCACATCTTCTTTGTCTCACCCTGTTTCCCCCCT CTCTGTCTCTCTTCTCTCTTTCGTTCTCTCTTTTCCTGCCCCCCTCCCCT CCTCTTTCTGTGTTAGCGTCGGAGGGGAAACCGCAGCGAAAGACGAGCCC ATCGAGGGACACCTCCCAGGTACGTGAAGCGTAACATGTGAATTTAGGTC ATGACCTCAGACGTTTTTATGGGAAGAGTTTCGCGCAACCTACGGTGTAC AGCGACGGCCCTCACTGAGGGCACTGGTCCATCTGATGGCGCACTGAATC TTGCGGCGGCAAGAGTTGTACACCACCTGATGTACAGCGACGGCTGCAGC AAGCGTGGATATTTTTGGGTGGAAACGCTAATGTTTGTGGCCACGCCCCG TGAATGACGATTTCGTCCATCCTGCCGCCGTCCCCTCTACCGCTCTCGCG CCGTGTGCATCAACTCAACAAAAGGCGTGATCAAGATGATCGTGGAAGAG GTGCGAGAGAGCGCGAGGGGGTTGCAAGAGAGGCTGGTCGCCAAGCTACG GGGCCCCATCCAGCTAACCAGCTGTCTGCAGGTACGTCTGTGCCCGTGTT TTGGCGCACGGTGGTAGTACGTTAGTTGTTGTTGCAGCGCCTGCAACTGA GAAAGTTACTCTGGCGTGGGACGGCGTGGAATCTACGACGGCGTGAGATC TAATTCGGGTATCAGAACCCGAAAACCATGATCGCTGTACCGTAGGTGAC ATGATGTAAGATACCATACCCTTTGGGCCGTTTCTCAAAACACTCGATTA CTCTGCAGCTGCGGTGCCGAGAACCGCGGCATCGGATCCATCTCGTCGAG AGCTTTCAAAAAGATGCATCACACTGCTGTTGTGGCATCGTGTTTGTCAT GGAGTAATCGAGCTTTGAAAACCCACCCAAGGGGTGTGGTGCCTCACGTC ATGCAGCAACCCACGGCATGAAGACCACAAGAGTGCGTCCTGTGTGTGCT GTCGGAGCCGCTTCAGGGCCCGCACGTGTATCTCTGTCCCAGGCTCCGAA ACTGTGGTGGTTGCCCTCCAAGCCAGCTAGCCACACCACGTCGCGCTGCA TTGGCAATAGACTGCATCGTCTCGGCAGGGCAAACTGGCAGGACCTGGCG CGCATGCTCGCGAGTGATCCCGAGGCGTTTTGGGTCAGTCTTGGCTCCGA CACGGGAGGGTACCTTATAAGAGAGGGCCTCCAATTTAAGGAGTCCAAAT CGGTTGTCACGGATTCGACCCGCTATGTATGTACTTCGAAGTAGTTGGGT ACCCTATCATTCCGGTGTAAGAGGGTCAAGGGCCTTCGTCACACCACCCT CTCATGTCCGAGCCACGACCCTGCGGCAAAAAAAAATCGAAATAATATAT CAAACCAAACAGGTCGTGTCCTGCCTGCGGCGCCTGGAGATCCTTTCCCT CGAGGAGAAGACCGAGAAAAAGAAGCAGCGGCAGCGGGCACTAGCGCGTC AGGCAGACGCGGACGTCAAGGGCTCGCCGCTGGAGAACAGCAGCGGCAGC AAGCGAGAAGTGGCGGCGATGGGATCCGCCAAGATCGGAGGAGGTGGGGT CAGCCAGCGGCAGCTCGCGCTCGTGGAGATGAAGCTTCAGGTGTGTGCGT TGTGTTTGTGCCTGTGGTGTGTGCCTATTGGAGTTGGCATCGACCGCGCT ATCTGACTGGTGGAAGAAAAGAAGACGTCCGTTCCGTCTGNNNNNNNNNN NNNNNNNNNNNNGCGTTCCGTCTGTGAGGCGGGACCGTGAACGCTGCGTT CACCGCTTTCTTGCCTGCGGGCTCCCCCCCCTTGCGGACTCCCCCCCCCG GCACGGGGTCCCGCCGAGGAGATTGGACGTTAGAGAGTGTGTGTTTGTCT TTGTTGTCAGCACCAACCGCACTGCTGTATCCGGCTGACCAATGCTACGA GGCCAGTGTCAGTGCGGCTAAGAACGGGAAAACTCTTCTGAAGGCCGTGA GCCGGGGCCTCGTGATGGAGCGTCGCAAGCGTACGTGTGTGGCTGGGCGT TTTGTTTTTCATCGACCGCGCCAACGGGCTGACCAGTGGAAAGACGCCAG TCTCAGTTCGGCTGAACACAGAAAACGTGTGTGTGCGACAAAAAAAGTTG CGAGAAACAAACAATTTCGCGACCCCCAAACGACGAGAAGATATTGTGAA AAGCCACGAGCGGCGTTTGTCCTGGCGTGATATGACCCCAGACCGAAGCT TGAGTCTTTGTCGTCACAACTGCTGATGGTCTGTTCGATCTTGTTCTTAT ATCTCTTGCGAAAAAATCCGCTCCAACGTCCGGGCGCTGTATTGAAACTC GATCTTCCGATGGTGTTAATGTAATAGGTGGATTTCTTGGAGGCTAGAGA TGCTTGGTTAGCCGACGCTGCTAGCCGGGCAGGCGGCCACGGGGGCGGGG CCGACTTGCAGCAGCAACAGCAGCAGCAGGCGCTCGGCGCGGCAGCGAAC ACGGCTTCTTCGGGTCCTTACCAGGTTTGCTTGGGGGGGGGGCAGGGAAC GGTATATGTAGTGTACTTGGCCACCGAGCTGGATATCGTTCAAGTGGTTC GAGTGTTTTGCTTGTTGTTGTTTATGTCGTTCCGAAGGCGGGTGTACACC AGAATGCATGGCACATTTGCGGCATGAAGCGAACTCGTGGTTGGTAGGCC TCCAGACGAAGCAGCCGCAGCAGCAGCAGTGCCGCCATGGAAGGTGTGTC ATTCCAGGCGTGCTTACGACAATCTTATTGAGGTGGCAATGGCGTACAAC GCCTTCGCCTCTCTGCTATGTAACCAATATTACCTTCGGTTGTGCGTCCT TGACTTGACAGGCTCTCATGGACCTAATCGAGAGCTGTCGATCGCAGTGG TTCGAGGTGGCTACACAGTTCAGGGCCATTTTTCTGTCCGTGGAAGGGAG CGGCGGAGGGTCGGCAACAGCCGCGCGTCAGTCGGCGGTTTCCTCGCCCC GGGTGGGCGAAGGGTTGGCCACCGGTAGCGGACGGGACAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8111:464..6257+

>mRNA_Ecto-sp13_S_contig8111.19454.1 ID=mRNA_Ecto-sp13_S_contig8111.19454.1|Name=mRNA_Ecto-sp13_S_contig8111.19454.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1272bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8111:464..6257+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATTGCTTCCGCTACTGCTGCTGTGGGAGCAAGGGAGGGCGACCATGC
GGAACAGGAACAGGAACCGGTGGAGCTCTCCGAGGCGTACGTTCACTCGC
TGGCTTCCCTTGGCCTGGAGCGTCTGCAAAACGAGCCCGGACGCTTGCAC
GCCGAGGCGATAGCTGTCGACGAGGCTCTGCACACGCTCAGCCTCGACCA
CTACAGAGTTTTCATACAGAACCAGGAGTGCGTTCGGCACGTGCGGGCGC
AGGGGAAGGAGATGGAGCGGCACCTGGCGTCGCTGCTAGCGGAGGTCCAC
GGGCTGGGCGCGGAGTTCTCCGTTTTTCAGAGGGAAGCGGCGGAACTCGT
GGGAGGGCACAAGAGGAACAGGCAGACCCTCAAGCACCACATGCAGGCAC
GTTTACTGGTCGAGCTGCTGGAGGTGCCGCAGCTGATGGACGCGTGCGTG
CGCAGCGACCTGATGGAGGAAGCTCTCTCCATCGCCACCTTCGCCTCTAC
CCTGGAGAGGCGGCACCGGAGTCGCCGAGTGGTGCCATCCGCGCCCGTCG
GCAGCGTCGGAGGGGAAACCGCAGCGAAAGACGAGCCCATCGAGGGACAC
CTCCCAGGCGTGATCAAGATGATCGTGGAAGAGGTGCGAGAGAGCGCGAG
GGGGTTGCAAGAGAGGCTGGTCGCCAAGCTACGGGGCCCCATCCAGCTAA
CCAGCTGTCTGCAGGTCGTGTCCTGCCTGCGGCGCCTGGAGATCCTTTCC
CTCGAGGAGAAGACCGAGAAAAAGAAGCAGCGGCAGCGGGCACTAGCGCG
TCAGGCAGACGCGGACGTCAAGGGCTCGCCGCTGGAGAACAGCAGCGGCA
GCAAGCGAGAAGTGGCGGCGATGGGATCCGCCAAGATCGGAGGAGGTGGG
GTCAGCCAGCGGCAGCTCGCGCTCGTGGAGATGAAGCTTCAGGTGGATTT
CTTGGAGGCTAGAGATGCTTGGTTAGCCGACGCTGCTAGCCGGGCAGGCG
GCCACGGGGGCGGGGCCGACTTGCAGCAGCAACAGCAGCAGCAGGCGCTC
GGCGCGGCAGCGAACACGGCTTCTTCGGGTCCTTACCAGGCTCTCATGGA
CCTAATCGAGAGCTGTCGATCGCAGTGGTTCGAGGTGGCTACACAGTTCA
GGGCCATTTTTCTGTCCGTGGAAGGGAGCGGCGGAGGGTCGGCAACAGCC
GCGCGTCAGTCGGCGGTTTCCTCGCCCCGGGTGGGCGAAGGGTTGGCCAC
CGGTAGCGGACGGGACAGGTGA
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