prot_Ecto-sp13_S_contig8105.19450.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8105.19450.1
Unique Nameprot_Ecto-sp13_S_contig8105.19450.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8105.19450.1 vs. uniprot
Match: A0A6H5KRF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF4_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.760e-56
Identity = 106/117 (90.60%), Postives = 109/117 (93.16%), Query Frame = 0 
Query:    1 EIGPDCFWLQNPTIFAPFSYLCDNFTMRLQMSPEAMVGRSLLSIVDERDALSLRNAVCQVLNEAQHXXXXXXXXXXXXXAVVHVRIAHGQIFCEASMSIACGSHGLVVVTRLYSSGS 117
            E GPD F L N TI APFSYLCDNFTMRLQM PEAMVGRSLLSIVDER+ALSLRNA+ QVLNEAQHXXXXXXXXXXXXXAVVHVRIAHGQIFCEASMSIACGSHGL+VVTRLYSSGS
Sbjct:   62 EHGPDLFSLHNATIDAPFSYLCDNFTMRLQMPPEAMVGRSLLSIVDEREALSLRNAIFQVLNEAQHXXXXXXXXXXXXXAVVHVRIAHGQIFCEASMSIACGSHGLIVVTRLYSSGS 178
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BLAST of mRNA_Ecto-sp13_S_contig8105.19450.1 vs. uniprot
Match: D8LCA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA0_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 3.130e-6
Identity = 46/140 (32.86%), Postives = 63/140 (45.00%), Query Frame = 0 
Query:    1 EIGPDCFWLQNPTIFAPFSYLCDNFTMRLQMSPEAMVGRSLLSIVDERDALSLRNAVCQVLNE----------------------------AQHXXXXXXXXXXXXXAVVHVRIAHGQIFCEASMSIACGSHGLVVVTRL 112
            E GPD F L   T+ APFS++  +  ++ Q+  E ++G+ L ++VD  D   L  A+  VL                                 XXXXXXX       VV + +  G   C ASMSIA G  GL+VVTR+
Sbjct:   21 ENGPDLFSLHGTTLDAPFSFVSKSLNLKFQLPSEYLLGKPLKTVVDPDDWGVLTTALLAVLGPNPTSGGKSGNSRDGGXXXXXXXXXXXXXXXXXXXXXXXVAVGSGTVVELNVMCGGASCLASMSIALGCRGLIVVTRM 160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8105.19450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRF4_9PHAE1.760e-5690.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCA0_ECTSI3.130e-632.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8105contigEcto-sp13_S_contig8105:5307..7072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8105.19450.1mRNA_Ecto-sp13_S_contig8105.19450.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8105 5307..7072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8105.19450.1 ID=prot_Ecto-sp13_S_contig8105.19450.1|Name=mRNA_Ecto-sp13_S_contig8105.19450.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
EIGPDCFWLQNPTIFAPFSYLCDNFTMRLQMSPEAMVGRSLLSIVDERDA
LSLRNAVCQVLNEAQHHHHAGGGSDPPGGAVVHVRIAHGQIFCEASMSIA
CGSHGLVVVTRLYSSGS*
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