prot_Ecto-sp13_S_contig8100.19446.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8100.19446.1
Unique Nameprot_Ecto-sp13_S_contig8100.19446.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length123
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8100.19446.1 vs. uniprot
Match: D7G491_ECTSI (Similar to Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3), partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G491_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 3.590e-67
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0 
Query:    1 LLQVAGDLCKGVLQRVTSTLNKLTSGVTKQARSAILRLGKRPRSTEEMVEAIECLRTMRAEEQIKLRQEQIWMGQLLDFVFEHGGLHHDVIIAVTGVHRVMGELSTATDKAEKAIAEGKAQL 122
            LLQVAGDLCKGVLQRVTSTLNKLTSGVTKQARSAILRLGKRPRSTEEMVEAIECLRTMRAEEQIKLRQEQIWMGQLLDFVFEHGGLHHDVIIAVTGVHRVM ELSTATDKAEKAIAEGKAQL
Sbjct: 1376 LLQVAGDLCKGVLQRVTSTLNKLTSGVTKQARSAILRLGKRPRSTEEMVEAIECLRTMRAEEQIKLRQEQIWMGQLLDFVFEHGGLHHDVIIAVTGVHRVMSELSTATDKAEKAIAEGKAQL 1497
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BLAST of mRNA_Ecto-sp13_S_contig8100.19446.1 vs. uniprot
Match: A0A6H5L524_9PHAE (DHC_N2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L524_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 2.500e-43
Identity = 96/123 (78.05%), Postives = 96/123 (78.05%), Query Frame = 0 
Query:    1 LLQVAGDLCKGVLQRVTSTLNKLTSGVTKQARSAILRLGKRPRSTEEMVEAIECLRTMRAEEQIKLRQEQIWMGQLLDFVFEHGGLHHDVIIAVTGVHRVMGELSTATDKAEKAIAEGKAQLQ 123
            LLQVAGDLCKGVLQRVTSTLNKLTSGVTKQARSAILRLGKRPRSTEEMVEAIECLRTMR EEQ                          VIIAVTGVHRVMGELSTATDKAEKAIAEGKAQLQ
Sbjct: 1589 LLQVAGDLCKGVLQRVTSTLNKLTSGVTKQARSAILRLGKRPRSTEEMVEAIECLRTMRTEEQ--------------------------VIIAVTGVHRVMGELSTATDKAEKAIAEGKAQLQ 1685
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8100.19446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G491_ECTSI3.590e-6799.18Similar to Dynein heavy chain 3, axonemal (Axonema... [more]
A0A6H5L524_9PHAE2.500e-4378.05DHC_N2 domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8100contigEcto-sp13_S_contig8100:5368..7076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8100.19446.1mRNA_Ecto-sp13_S_contig8100.19446.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8100 5368..7076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8100.19446.1 ID=prot_Ecto-sp13_S_contig8100.19446.1|Name=mRNA_Ecto-sp13_S_contig8100.19446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
LLQVAGDLCKGVLQRVTSTLNKLTSGVTKQARSAILRLGKRPRSTEEMVE
AIECLRTMRAEEQIKLRQEQIWMGQLLDFVFEHGGLHHDVIIAVTGVHRV
MGELSTATDKAEKAIAEGKAQLQ
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