prot_Ecto-sp13_S_contig80976.19441.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80976.19441.1
Unique Nameprot_Ecto-sp13_S_contig80976.19441.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length46
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig80976.19441.1 vs. uniprot
Match: D8LS27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS27_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 4.700e-18
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0 
Query:    1 GSGGNTPLHLAALEGMDELVSSLLLRGADKDALSVLGKTPLMLASR 46
            GSGGNTPLHLAALEGMDEL SSLLLR AD+DALSVLGKTPLM ASR
Sbjct:   19 GSGGNTPLHLAALEGMDELASSLLLREADEDALSVLGKTPLMRASR 64
[Close]
BLAST of mRNA_Ecto-sp13_S_contig80976.19441.1 vs. uniprot
Match: A0A6H5K663_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K663_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.380e-13
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:    1 GSGGNTPLHLAALEGMDELVSSLLLRGADKDALSVLGK 38
            GSGGNTP HLAALEGMDELVSSLLLRGADKDALSVLGK
Sbjct:  114 GSGGNTPRHLAALEGMDELVSSLLLRGADKDALSVLGK 151
[Close]
BLAST of mRNA_Ecto-sp13_S_contig80976.19441.1 vs. uniprot
Match: A0A6H5KKF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF4_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 2.810e-5
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    6 TPLHLAALEGMDELVSSLLLRGADKDALSVLGKTPLMLAS 45
            TPLHLA +EG+D +VS L+ RG DKDA+   G++ L++AS
Sbjct:  153 TPLHLATMEGLDGIVSPLVFRGVDKDAVDKYGRSALIIAS 192
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80976.19441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LS27_ECTSI4.700e-1891.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K663_9PHAE1.380e-1397.37Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KKF4_9PHAE2.810e-555.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 3..32
e-value: 0.0016
score: 27.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 3..35
score: 12.529
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..46
e-value: 2.7E-11
score: 45.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..45
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 4..45
e-value: 3.4E-6
score: 27.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 3..46
score: 17.369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80976contigEcto-sp13_S_contig80976:472..609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80976.19441.1mRNA_Ecto-sp13_S_contig80976.19441.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80976 472..609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80976.19441.1 ID=prot_Ecto-sp13_S_contig80976.19441.1|Name=mRNA_Ecto-sp13_S_contig80976.19441.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=46bp
GSGGNTPLHLAALEGMDELVSSLLLRGADKDALSVLGKTPLMLASR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom