prot_Ecto-sp13_S_contig80964.19440.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80964.19440.1
Unique Nameprot_Ecto-sp13_S_contig80964.19440.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length44
Homology
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BLAST of mRNA_Ecto-sp13_S_contig80964.19440.1 vs. uniprot
Match: A0A6H5KIT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIT0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.090e-15
Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 0 
Query:    1 MDAHTAQRVLSTQIKELADFILLCRELIVEYQAATGEGGEPSS 43
            MDAHTAQ VLSTQ KELADFILLCRELI+EYQ ATGEGG PSS
Sbjct:   66 MDAHTAQCVLSTQSKELADFILLCRELIIEYQPATGEGG-PSS 107
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BLAST of mRNA_Ecto-sp13_S_contig80964.19440.1 vs. uniprot
Match: D8LC45_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC45_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 3.870e-15
Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0 
Query:    1 MDAHTAQRVLSTQIKELADFILLCRELIVEYQAATGEGG 39
            MDAHTAQ VLSTQ KELADFILLCRELIVEYQAATGEGG
Sbjct:   39 MDAHTAQCVLSTQRKELADFILLCRELIVEYQAATGEGG 77
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80964.19440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIT0_9PHAE1.090e-1588.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LC45_ECTSI3.870e-1594.87Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80964contigEcto-sp13_S_contig80964:254..385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80964.19440.1mRNA_Ecto-sp13_S_contig80964.19440.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80964 204..589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80964.19440.1 ID=prot_Ecto-sp13_S_contig80964.19440.1|Name=mRNA_Ecto-sp13_S_contig80964.19440.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=44bp
MDAHTAQRVLSTQIKELADFILLCRELIVEYQAATGEGGEPSS*
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