prot_Ecto-sp13_S_contig8082.19422.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8082.19422.1
Unique Nameprot_Ecto-sp13_S_contig8082.19422.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length192
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8082.19422.1 vs. uniprot
Match: A0A6H5KQR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 2.440e-96
Identity = 167/194 (86.08%), Postives = 170/194 (87.63%), Query Frame = 0 
Query:    1 SKKVELKTLPAVVGSAHCPFCSSSIPRAKLSAHLLRCKKLRRSQTCPKPKTGPSPRISGTDAFNTTTIHEDDKASTASFNGGGIANNNSS---NTSHKVRCPHCLHGFSPAVAPTHISICARVENRPKGSGIAKAAAASKDDAQKKVALGVDYTDASPPGGRKGLAASHGSSGAXXXXXXXXXPEKARVMPPFY 191
            SKKV LKTLPAV G AHCPFCSSSIPRAKLSAHLLRCKKLRRSQTCP+PKTGPSPRISGTDA N T IHEDDKA TA++NGG           N S KVRCPHCL GFSPAVAPTHISICARVENRPKGSG AKAAAA KDDAQKKVALGV YTDASPPGGRKGLAASHGSSGAXXXXXXXXXPEKARVMPPFY
Sbjct:  402 SKKVALKTLPAVEGRAHCPFCSSSIPRAKLSAHLLRCKKLRRSQTCPRPKTGPSPRISGTDASNATVIHEDDKARTATYNGGXXXXXXXXXXXNASRKVRCPHCLRGFSPAVAPTHISICARVENRPKGSGTAKAAAARKDDAQKKVALGVGYTDASPPGGRKGLAASHGSSGAXXXXXXXXXPEKARVMPPFY 595
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BLAST of mRNA_Ecto-sp13_S_contig8082.19422.1 vs. uniprot
Match: D8LFQ9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 1.250e-37
Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0 
Query:    1 SKKVELKTLPAVVGSAHCPFCSSSIPRAKLSAHLLRCKKLRRSQTCPKPKTGPSPRISGTDAFNTTTIHEDDKASTASFNGGGIA 85
            SKKV LKTLPAV GSAHCPFCS+SIPRAKLSAHLLRCKKLRRSQTCP+P+ GPSPRI GTDA NTTTI EDDKA TA+FNGGGIA
Sbjct: 1201 SKKVALKTLPAVEGSAHCPFCSTSIPRAKLSAHLLRCKKLRRSQTCPRPEAGPSPRIGGTDASNTTTIDEDDKARTATFNGGGIA 1285
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BLAST of mRNA_Ecto-sp13_S_contig8082.19422.1 vs. uniprot
Match: A0A835Z7V0_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7V0_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.800e-5
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   95 KVRCPHCLHGFSPAVAPTHISICARVENRPKG 126
            +VRCPHCL GFS A AP HI+IC RV +RP+G
Sbjct: 1101 RVRCPHCLRGFSAAAAPHHIAICERVVSRPRG 1132
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8082.19422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KQR3_9PHAE2.440e-9686.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ9_ECTSI1.250e-3787.06WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A835Z7V0_9STRA1.800e-568.75WW domain-containing protein n=1 Tax=Tribonema min... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8082contigEcto-sp13_S_contig8082:1306..4491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8082.19422.1mRNA_Ecto-sp13_S_contig8082.19422.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8082 522..4491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8082.19422.1 ID=prot_Ecto-sp13_S_contig8082.19422.1|Name=mRNA_Ecto-sp13_S_contig8082.19422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp
SKKVELKTLPAVVGSAHCPFCSSSIPRAKLSAHLLRCKKLRRSQTCPKPK
TGPSPRISGTDAFNTTTIHEDDKASTASFNGGGIANNNSSNTSHKVRCPH
CLHGFSPAVAPTHISICARVENRPKGSGIAKAAAASKDDAQKKVALGVDY
TDASPPGGRKGLAASHGSSGARRLQQQQQQPEKARVMPPFY*
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