prot_Ecto-sp13_S_contig8064.19404.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8064.19404.1
Unique Nameprot_Ecto-sp13_S_contig8064.19404.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length276
Homology
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: D7FN41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN41_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 7.570e-138
Identity = 223/275 (81.09%), Postives = 225/275 (81.82%), Query Frame = 0
Query:    1 MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGGMQGGAMQGGAGGMMXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGASGRKNQNYGGPQAGQHWGMMGQQQQYPAQGQGSGQWGIGGGDGXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAYQGQTTQAXXXXXXXGGQQGY 275
            MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLP RAGGGMQGGAMQGGAGGMMXX VGGSGED+SARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGAS RKNQNYGGPQAGQHWGMMGQQQQYPAQGQGSGQWG+GGGD XXX   G X                                  GGAYQGQ TQA       GGQQGY
Sbjct:  196 MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPARAGGGMQGGAMQGGAGGMMXXAVGGSGEDVSARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGASNRKNQNYGGPQAGQHWGMMGQQQQYPAQGQGSGQWGVGGGDXXXXGFGGQXQWGQQQQFGAPQGVQQAYGNGAYAGGAAAYGTNGGGAYQGQATQAAGGAGAWGGQQGY 470          
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: A0A6H5KMW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW4_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 5.960e-133
Identity = 239/275 (86.91%), Postives = 241/275 (87.64%), Query Frame = 0
Query:    1 MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGGMQGGAMQGGAGGMMXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGASGRKNQNYGGPQAGQHWGMMGQQQQYPAQGQGSGQWGIGGGDGXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAYQGQTTQAXXXXXXXGGQQGY 275
            MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGGMQGG MQGGAG   XXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFR+A NAAAAVAEPEKQLDGRLTHCNIAAEGASGRKNQNYGGPQAGQHWGMMGQQQQYPAQGQGSGQWG+GG   XXXXXX  XXXXXXXXXXXX             XXXXXX    GGAYQGQTTQA       GGQQGY
Sbjct:   96 MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGGMQGGVMQGGAGXXXXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRYAVNAAAAVAEPEKQLDGRLTHCNIAAEGASGRKNQNYGGPQAGQHWGMMGQQQQYPAQGQGSGQWGVGGDXXXXXXXX--XXXXXXXXXXXXPQGVQQAYGNGAYXXXXXXYGTNGGAYQGQTTQAAGGAGAWGGQQGY 368          
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: A0A388KX58_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KX58_CHABU)

HSP 1 Score: 140 bits (353), Expect = 1.150e-35
Identity = 72/163 (44.17%), Postives = 100/163 (61.35%), Query Frame = 0
Query:    2 DKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGGMQGGAMQGGAGGMMXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEG 164
            DK T KS+G+GF+TFK MD A  AL  P K IDGR+++CNLAA                         G +    GG G D S RK+++ GLS++T+TE+L  +F QFGE+E+  V  D+A+GKS+G+GFVT++    A  A++EP + +DGR  HC +AAEG
Sbjct:  108 DKATGKSRGFGFITFKHMDSAQRALREPSKKIDGRITVCNLAAA------------------------GTLGGSQGGGGGDQSQRKLYIGGLSYETSTETLLNIFGQFGEIEEGSVAYDKATGKSRGFGFVTYKTVEGANRALSEPTRTIDGRTVHCKLAAEG 246          
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: A0A2D4CE34_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CE34_PYTIN)

HSP 1 Score: 127 bits (318), Expect = 2.210e-30
Identity = 82/185 (44.32%), Postives = 106/185 (57.30%), Query Frame = 0
Query:    2 DKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALR----------SSQPLPQR-AGGGMQGGAMQGGAGGMMXXXVGGS---------GEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGAS 166
            DK + KS+GYGFVTF  M GA  A+E     IDGRV+ CNLAA+R          S Q  P R +   +Q   M        XX    S         G D S RK+FVRGL+WDT+ E+LR +F  FGEL +  V  +R +GKSKG+GFVT+R  A+A  A+ +P K +DGR  +CN+A+ G S
Sbjct:  126 DKASGKSRGYGFVTFIDMHGAEQAVEKQTLEIDGRVTTCNLAAVRTQQSDEHASHSQQQTPSRNSQPQLQPSVMMXXXXXXXXXMASVSTPPGQGFRGGNDESERKLFVRGLAWDTSDETLRAVFQVFGELVEASVVRERKTGKSKGFGFVTYRHRASAELALQQPAKMIDGRQVNCNLASLGRS 310          
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: A0A7S3PM17_9STRA (Hypothetical protein n=3 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PM17_9STRA)

HSP 1 Score: 125 bits (315), Expect = 8.450e-30
Identity = 70/167 (41.92%), Postives = 98/167 (58.68%), Query Frame = 0
Query:    2 DKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGGMQGGAMQGGAGGMMXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGASGR 168
            DK T KSKGYGF+T++S   A  ALENPEK + GR    NLA   S+ P         QGG+ +G               +++ RK+FVRGL++DTT E  +++F Q+GE EDC +  D+++G SKGYGFVT+    +A   +  P K+LDG+   CN+A +G   R
Sbjct:  213 DKTTGKSKGYGFITYRSKIDAMKALENPEKQLGGRTIKLNLA---SNDP--------KQGGSFEG---------------NVALRKVFVRGLNYDTTQEEFQSLFQQYGETEDCNIAFDKSTGASKGYGFVTYTSPVSAMKCLEIPNKELDGKTIICNLAEKGKRSR 353          
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: A0A1W0A0X4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0X4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.060e-29
Identity = 72/166 (43.37%), Postives = 99/166 (59.64%), Query Frame = 0
Query:    1 MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAAL-RSSQPLPQRAGGGMQGGAMQGGAGGMMXXX--VGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAE 163
            +DK T KSKG+GF+ F  M+ A   L+     I+GR   C LAA   + +P PQ +   ++  A    A  ++     VG  G++   RK+FVRGL WDT  ESL   F ++G++ED  VT DR +GKSKGYGF+ FR    A  A+A+P K +DGR THCN+A +
Sbjct:  110 VDKSTGKSKGFGFLVFPDMETADIVLKAQPHEIEGRKCPCKLAATPHTEEPTPQPSNR-IKNSANTSSAANILQPQQDVGPPGDEAD-RKLFVRGLHWDTHAESLNAEFKKYGDIEDVTVTKDRQTGKSKGYGFIVFRHQMGARRALAQPTKVIDGRSTHCNLAIQ 273          
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: A0A1Y1I415_KLENI (RNA binding domain protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I415_KLENI)

HSP 1 Score: 123 bits (308), Expect = 1.080e-28
Identity = 72/169 (42.60%), Postives = 97/169 (57.40%), Query Frame = 0
Query:    1 MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGGMQGGAMQGGAGGMMXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGASGRK 169
            +DK++ KSKG+GFVTF+ +D A  AL NP+K I  R    NLAAL SS    QR                           D+S RK++V GL++DTT E+L  +F +FGE+E+  + T+R +GKS+G+ FVTFR A  A AA AEP K +D R     +AAEG   R+
Sbjct:  102 VDKISGKSKGFGFVTFRHIDSAQKALRNPKKQIRDRTVHANLAALGSSAT--QR------------------------DNNDVSQRKVYVGGLNYDTTNETLLEVFGKFGEIEEGSIATERTTGKSRGFAFVTFRTAEGAQAACAEPVKHIDTRNVQVKLAAEGRQQRQ 244          
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: D8QPR6_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QPR6_SELML)

HSP 1 Score: 121 bits (304), Expect = 1.120e-28
Identity = 68/181 (37.57%), Postives = 101/181 (55.80%), Query Frame = 0
Query:    2 DKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGGMQGGAMQGGAGGMMXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEG-----ASGRKNQNYGGPQ 177
            DK T KS+G+GF+TFK MD A  AL+ P K IDGR+++CNLA++ SS                            G    D + RK+++ GLS++T+ E+L  +FSQ+GE+E+  V  D+ + KS+G+ F+T++    A  A+ +P K ++GR     +AAEG      S    QN GGPQ
Sbjct:  105 DKATGKSRGFGFITFKHMDSAQRALKEPSKTIDGRITVCNLASVGSS---------------------------AGAGSADQAQRKLYIGGLSYETSNETLLNIFSQYGEIEEGAVAYDKNTNKSRGFAFITYKSVEAARKAIDDPNKTIEGRHVIVKLAAEGQKEKAVSQSSAQNQGGPQ 258          
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: A0A067CRS6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRS6_SAPPC)

HSP 1 Score: 119 bits (299), Expect = 6.490e-28
Identity = 76/185 (41.08%), Postives = 97/185 (52.43%), Query Frame = 0
Query:    1 MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQPLPQRAGGGMQGGAMQGGA------------------GGMMXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGASG 167
            MDK T KSKG+GFVTF  M+ A  ALE     IDGR   CNLAA   S    QRA            A                          G  G++   RK+FVRGL WDT  E++ T F+++GE+ED  V  DR +GKSKGYGF+ +R    A  A+A+P K ++GR THCN+A++   G
Sbjct:  100 MDKATGKSKGFGFVTFADMEAADHALEAQPHDIDGRKCPCNLAATHESSSSRQRADVAASYQKAPPAAYTPXXXXXXXXXXXXXXXSSSTSGDAGPPGDETD-RKLFVRGLHWDTQVETVTTEFAKYGEIEDISVMKDRQTGKSKGYGFIVYRHQNAAKRALAQPMKLIEGRNTHCNLASQPTRG 283          
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Match: A0A3R6YYB0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YYB0_9STRA)

HSP 1 Score: 121 bits (303), Expect = 6.690e-28
Identity = 76/192 (39.58%), Postives = 108/192 (56.25%), Query Frame = 0
Query:    1 MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQP--------LPQRAGGGMQ----------GGAMQGGAGGMMXXXVGGSGEDISARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQLDGRLTHCNIAAEGASGRKNQNYG 174
            MD+ T KSKG+GFVT++ M+ A   L      IDGR   CNLAA+  + P         P  A    Q          G A    A  ++   +G  G++ S RK+F+RGL ++TTTES+   F ++G+LE+  +  DRA+GKSKGY F+ +R    A  A+A+P+K +DGR THCN+A++     KN N G
Sbjct:  179 MDRNTGKSKGFGFVTYEDMESAERVLSVQPLEIDGRKCACNLAAVPENNPNAGPVKHNKPAHAPSYSQQYQQHQAPTYGYAQPPMASKVLYADLGPPGDE-SDRKLFLRGLDYNTTTESVTVEFQKYGDLEEVTIAKDRATGKSKGYAFIVYRHMGGAKRALAQPQKFIDGRATHCNLASQ-----KNSNAG 364          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8064.19404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN41_ECTSI7.570e-13881.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMW4_9PHAE5.960e-13386.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A388KX58_CHABU1.150e-3544.17Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A2D4CE34_PYTIN2.210e-3044.32Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A7S3PM17_9STRA8.450e-3041.92Hypothetical protein n=3 Tax=Aplanochytrium stocch... [more]
A0A1W0A0X4_9STRA2.060e-2943.37Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1Y1I415_KLENI1.080e-2842.60RNA binding domain protein n=1 Tax=Klebsormidium n... [more]
D8QPR6_SELML1.120e-2837.57Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A0A067CRS6_SAPPC6.490e-2841.08Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A3R6YYB0_9STRA6.690e-2839.58Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 87..159
e-value: 4.4E-22
score: 89.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 4..36
e-value: 2.1E-5
score: 24.2
coord: 88..154
e-value: 6.6E-16
score: 57.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 86..169
score: 16.057
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 79..222
e-value: 1.5E-23
score: 85.3
coord: 1..71
e-value: 1.8E-9
score: 39.8
IPR037366BOULE/DAZ familyPANTHERPTHR11176BOULE-RELATEDcoord: 71..257
coord: 2..50
NoneNo IPR availablePANTHERPTHR11176:SF22coord: 71..257
coord: 2..50
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 81..180
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8064contigEcto-sp13_S_contig8064:974..2779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8064.19404.1mRNA_Ecto-sp13_S_contig8064.19404.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8064 2..3463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8064.19404.1 ID=prot_Ecto-sp13_S_contig8064.19404.1|Name=mRNA_Ecto-sp13_S_contig8064.19404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=276bp
MDKMTQKSKGYGFVTFKSMDGAHAALENPEKMIDGRVSLCNLAALRSSQP
LPQRAGGGMQGGAMQGGAGGMMGGAVGGSGEDISARKIFVRGLSWDTTTE
SLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQ
LDGRLTHCNIAAEGASGRKNQNYGGPQAGQHWGMMGQQQQYPAQGQGSGQ
WGIGGGDGQAQGFGGQGQWGQQQQFGAPQGVQQAYGNGAYAGGAAAYGTN
GGGAYQGQTTQAAGGAGAWGGQQGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR037366BOULE/DAZ
IPR035979RBD_domain_sf