prot_Ecto-sp13_S_contig8055.19390.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8055.19390.1
Unique Nameprot_Ecto-sp13_S_contig8055.19390.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: A0A6H5KRX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX0_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 5.260e-15
Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 PSKLRRVGKKDMTLHFVCPVDMTK-------VAVVTAKVALNVTTGLSVDIWDFLKD 51
            PS LR + KKDMTLHF+CPVDMTK       VAVVTAKVAL  TTGL VDI DFLKD
Sbjct:  164 PSNLRGLAKKDMTLHFLCPVDMTKRCRAAMVVAVVTAKVALKATTGLKVDISDFLKD 220          
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: A0A6H5L1D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D3_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 7.780e-14
Identity = 43/76 (56.58%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    3 SKLRRVGKKDMTLHFVCPVDMTKV---------------------------AVVTAKVALNVTTGLSVDIWDFLKD 51
            SKLRR+GKKDMTLHF+CPVDMTKV                           AVVTAKVALN TTGL VDI +FLKD
Sbjct:  118 SKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKD 193          
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.420e-13
Identity = 43/76 (56.58%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    3 SKLRRVGKKDMTLHFVCPVDMTKV---------------------------AVVTAKVALNVTTGLSVDIWDFLKD 51
            SKLRR+GKKDMTLHF+CPVDMTKV                           AVVTAKVALN TTGL VDI +FLKD
Sbjct:  786 SKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKD 861          
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: A0A6H5KSY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY4_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.600e-13
Identity = 42/77 (54.55%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    2 PSKLRRVGKKDMTLHFVCPVDMTKV---------------------------AVVTAKVALNVTTGLSVDIWDFLKD 51
            P+K R VGKKDM LHF+CPVDMTKV                           AVVTAKVALN TTGL+VDI DFLKD
Sbjct:  341 PNKFRGVGKKDMALHFLCPVDMTKVPCGYGGEGYRFQETRDWVKKISPVLQVAVVTAKVALNATTGLNVDISDFLKD 417          
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: A0A6H5JYD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD1_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.260e-12
Identity = 42/76 (55.26%), Postives = 45/76 (59.21%), Query Frame = 0
Query:    3 SKLRRVGKKDMTLHFVCPVDMTKV---------------------------AVVTAKVALNVTTGLSVDIWDFLKD 51
            SKLR +GKKDMTLHF+CPVDMTKV                           AVVTAKVALN TTGL VDI +FLKD
Sbjct:  562 SKLRLLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTAKVALNATTGLDVDISNFLKD 637          
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 6.010e-12
Identity = 40/76 (52.63%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    3 SKLRRVGKKDMTLHFVCPVDMTKV---------------------------AVVTAKVALNVTTGLSVDIWDFLKD 51
            SKLRR+GKKDMTLHF+CPVDMTKV                           AVVTA+VALN TTGL V+I +FL+D
Sbjct:  618 SKLRRLGKKDMTLHFLCPVDMTKVPCGYGGEGYRFQETRGWVKKISPVLQVAVVTARVALNATTGLDVNISNFLQD 693          
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 7.320e-11
Identity = 39/76 (51.32%), Postives = 44/76 (57.89%), Query Frame = 0
Query:    3 SKLRRVGKKDMTLHFVCPVDMTKV---------------------------AVVTAKVALNVTTGLSVDIWDFLKD 51
            +KLR + KKDMTLHF+CPVDMT+V                           AVVTAKVALN TTGL+VD  DFLKD
Sbjct:  914 TKLRGLAKKDMTLHFLCPVDMTRVPCGYGGEGHRFKQTRGWVRKISPVLQVAVVTAKVALNATTGLNVDPSDFLKD 989          
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 7.330e-11
Identity = 41/76 (53.95%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    3 SKLRRVGKKDMTLHFVCPVDMTKV---------------------------AVVTAKVALNVTTGLSVDIWDFLKD 51
            SKL  VGKKDMTL F+CPVDMT+V                           AVVTAKVALN TTGL VDI DFLKD
Sbjct: 1133 SKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNATTGLHVDISDFLKD 1208          
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.000e-10
Identity = 39/76 (51.32%), Postives = 44/76 (57.89%), Query Frame = 0
Query:    3 SKLRRVGKKDMTLHFVCPVDMTKV---------------------------AVVTAKVALNVTTGLSVDIWDFLKD 51
            SKLR VGKK+M LHF+CPVDMTKV                           AVVTAKVALN T GL+V+I +FLKD
Sbjct: 1066 SKLRGVGKKEMVLHFLCPVDMTKVPCGYGGEGYRFRETRGWVKKISPVLQVAVVTAKVALNATAGLNVNISEFLKD 1141          
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 4.780e-10
Identity = 37/76 (48.68%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    3 SKLRRVGKKDMTLHFVCPVDMTKV---------------------------AVVTAKVALNVTTGLSVDIWDFLKD 51
            SKLR VG K+MTLHF+CPVDMTKV                           A+VTAKVA+  T+GL VD+ DFLKD
Sbjct: 1059 SKLRGVGTKEMTLHFLCPVDMTKVPCGYDGDGYRFRETRRWVKKLSPVLQVAMVTAKVAIKATSGLDVDLSDFLKD 1134          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8055.19390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KRX0_9PHAE5.260e-1571.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1D3_9PHAE7.780e-1456.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1K4_9PHAE1.420e-1356.58Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSY4_9PHAE3.600e-1354.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYD1_9PHAE1.260e-1255.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K516_9PHAE6.010e-1252.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G431_ECTSI7.320e-1151.32LRR-GTPase of the ROCO family, incomplete sequence... [more]
D8LJS7_ECTSI7.330e-1153.95LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC3_ECTSI1.000e-1051.32LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUD0_ECTSI4.780e-1048.68LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8055contigEcto-sp13_S_contig8055:3509..4021 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8055.19390.1mRNA_Ecto-sp13_S_contig8055.19390.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8055 3509..4023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8055.19390.1 ID=prot_Ecto-sp13_S_contig8055.19390.1|Name=mRNA_Ecto-sp13_S_contig8055.19390.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
RPSKLRRVGKKDMTLHFVCPVDMTKVAVVTAKVALNVTTGLSVDIWDFLK
D
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