mRNA_Ecto-sp13_S_contig1231.1939.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1231.1939.1
Unique NamemRNA_Ecto-sp13_S_contig1231.1939.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: D7FH17_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH17_ECTSI)

HSP 1 Score: 529 bits (1362), Expect = 9.850e-186
Identity = 270/283 (95.41%), Postives = 275/283 (97.17%), Query Frame = 1
Query:    1 MSTATAAAGVPKSDWSLPTRPGLHIEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTEE 849
            MSTAT AAGVPKSDWSLPTRPGL IEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGV+VHELLAIEAWKEFVLPRLLET+RARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPR     NAREVAK+IEERL+KLSPAEE+RGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRR EE
Sbjct:    1 MSTATVAAGVPKSDWSLPTRPGLQIEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVVVHELLAIEAWKEFVLPRLLETERARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPR-----NAREVAKDIEERLAKLSPAEEVRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRAEE 278          
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A835ZG21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG21_9STRA)

HSP 1 Score: 319 bits (818), Expect = 2.950e-104
Identity = 163/274 (59.49%), Postives = 206/274 (75.18%), Query Frame = 1
Query:   28 VPKSDWSLPTRPG-LHIEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTE 846
             PK DWSLP + G L IEDENEYA AA  APVL V EAE + E+L  F + ++G+S+W +Q++RL KLNLQAHQSAMAR+DEYVLEAL TF K+ ++V ELL +EAWKEF LP LL++ R RSG+C MRLYFTLYHEAT+ANLL+ AL+  H C +AG D L++L DYC RK+ +L S R  SKP+ P   +A+ +A  +EER     P +E+    ++ EFR CVTAV +LRF+CEH+  LPLGV TR+LDTHDVLLG+V L+ENPPWTRR +
Sbjct:    7 APKHDWSLPDKRGRLDIEDENEYASAAAGAPVLDVAEAERYAEALSAFDVTDVGSSAWLDQHQRLVKLNLQAHQSAMARADEYVLEALQTFGKVPLLVRELLLVEAWKEFALPDLLKSPRLRSGRCNMRLYFTLYHEATVANLLEAALYRRHACAEAG-DALVDLVDYCVRKIVLLNSTRRFSKPK-PEAADAKALAAELEER----DPVKELLAQADDVEFRCCVTAVTMLRFICEHIAALPLGVATRLLDTHDVLLGIVPLIENPPWTRRLD 274          
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A482SG05_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SG05_9ARCH)

HSP 1 Score: 233 bits (595), Expect = 9.100e-71
Identity = 121/262 (46.18%), Postives = 179/262 (68.32%), Query Frame = 1
Query:   70 HIEDENEYAGAANAAPVLY-VEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRS---PVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRT 843
            H++ E+E +   +  PV+    EAE ++ESL+ F + E+G+ +W EQ+R++ KLNLQAH +A++ SDEYV+EA+LTF+K+ V++H+LL IEAWKE V P L E     SG+  MRLYF LYHEAT+ N+L++ L++ H  E AGG++++E+ DY ARK+  L +G +  + R     V  +  + AK +   L   +PAEE+  + ++ EFR+C++AVAL RFL EH   LPL   +R+ DTHD L+ L+ L+E PPWTRRT
Sbjct:   15 HMKIEDEVSAPLSGLPVVIDANEAERYIESLKCFELSEVGSRAWMEQHRKMEKLNLQAHHNALSNSDEYVMEAILTFNKIPVLIHDLLLIEAWKESVYPLLKEE---LSGRNNMRLYFILYHEATVVNMLEIFLYYKHFVE-AGGEVMIEVIDYVARKLIRLNNGSSEFRLRDLAQEVSASEPDAAKKLASALEARTPAEELDHHLQDIEFRICISAVALARFLSEHAEVLPLSCQSRMTDTHDYLVLLIPLIEQPPWTRRT 272          
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A7S1CRR6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CRR6_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.910e-65
Identity = 121/257 (47.08%), Postives = 167/257 (64.98%), Query Frame = 1
Query:   97 GAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRA--RSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRAS----SKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTEE 849
            GA     +L   +AE   ES+R FS+ E+G+S+W  Q+  L K NLQAH +A    D +V+EA+LTFDK+ V++HEL+A+EAW+EFV P LL +  A  R+G   +RLY+T YHEATL NLL+V L+H + CE A GD L++L DYC RK++ L+   A+     K R  +    R          +K   A ++     + E+R  VTAV+LLR++ EH+ +LPLGVM RVLDTHDV++ +V L+ENPPWTRRT E
Sbjct:   17 GADLGVGILLPGDAERIAESIRGFSVREVGSSAWMRQHEALEKANLQAHANARGNRDPFVMEAMLTFDKMTVLIHELMAVEAWREFVFP-LLRSGGAVERNG---LRLYYTFYHEATLVNLLEVFLYHDYACE-AAGDALIDLVDYCCRKVSWLVMRGATPAEAKKSREEIVAEMRGDXXXXXXXGAKSVAARDMEARLNDIEYRCAVTAVSLLRYITEHIAKLPLGVMGRVLDTHDVMIMMVPLIENPPWTRRTPE 268          
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A7S2RNA9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNA9_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.490e-61
Identity = 122/280 (43.57%), Postives = 165/280 (58.93%), Query Frame = 1
Query:   16 AAAGVPKSDWSLPTRPGLHIEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMT-MLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPA-EEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTEE 849
            AA   P+  WSL  RP + I +E        AAP+    EAE  +E+L EF + ++G+S W +Q+  + +LNLQAHQSA  + DE+VLEALLTFDKL  +VHELL  EAW+  V PR+ +      GK TMR YF LYHEATL NLL V + H H  E  G +  ++L DY +R++  M    R  SK       +A    K +      +  A  ++    E+  F++ V    L R+LCEHL+ LPL V+TR  DTHD+L  +V L+ENPPWTRRT++
Sbjct:    5 AAGARPEHAWSLKDRPTMAIGEETSTPDGVPAAPLFSPWEAEQRIETLAEFDVADVGSSLWMKQHEAIEQLNLQAHQSAQQQGDEFVLEALLTFDKLRTLVHELLVTEAWRVNVFPRIKKA--LVDGKATMRGYFCLYHEATLVNLLCVCMHHVHATESLG-ETAVDLVDYVSRRLVEMNAKARVWSKRAEGGSKSAEASVKAVAAATEPVGDALADLENQAEDILFQLSVATTTLARYLCEHLNTLPLSVLTRATDTHDLLCCIVPLIENPPWTRRTKD 281          
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: W2KZ45_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KZ45_PHYPR)

HSP 1 Score: 205 bits (521), Expect = 4.510e-58
Identity = 112/238 (47.06%), Postives = 151/238 (63.45%), Query Frame = 1
Query:  133 EAEHFVESLREFSIEEIGNSS-WFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRT 843
            EAE  VE L   S+E+IG S+ W E ++ + KLNLQAHQSA  + D +V+E+LLTFDKL  ++  LL++E WK  VLP L   D+      ++RLYF +YHEA L NLL+VA FH HI E    DLL+EL DYC RK++ L+      + R     +  +    + + +   SP EE++  + E EFRV V  V +LR++ E LH LPL V++R+LD HD LL LV LVENPPWT +T
Sbjct:   15 EAEQIVERLVGQSLEQIGRSTQWLEHHQAVEKLNLQAHQSAQRKQDNFVVESLLTFDKLPTVISNLLSLELWKANVLPLLRCQDK---DAASLRLYFVIYHEAALTNLLEVAFFHEHIVESLTDDLLVELVDYCVRKLSWLVG---LPRERIAEATSFHKTGPELVQMMKAQSPREELQRQRMEIEFRVAVQTVTILRYIAERLHVLPLSVVSRLLDKHDALLTLVALVENPPWTHKT 246          
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A7S1UIN4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIN4_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.160e-57
Identity = 116/277 (41.88%), Postives = 163/277 (58.84%), Query Frame = 1
Query:   31 PKSDWSLPTRPGLHIEDENEYAGAANAAPV--LYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKP------RSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTR 837
            P   W+LP +  L I DE ++A   +  P+  L  EEAE  VE LR F   ++G  +W  Q++ + +LN+QAH SA A +DE+V+EA+LTF+KL  +V ELL IEAWKE  LP+++   +   G  +MR YF LYHE  L N L+  L+H +    A GD  +EL DYCARK+T L S     +P       +   G+ RE A    E+ +  +   E+    +ETE  VC+ A+ + RFL EHL +LPL    R+ +THDVL+  V L++NPPW R
Sbjct:    7 PAHSWTLPQQ-HLDIVDEVDHANDVDGIPITLLQAEEAERLVEGLRAFGPNDVGGPAWMAQHQNIQRLNMQAHASAKANADEFVVEAVLTFEKLPTLVRELLLIEAWKEQALPKII--SKVDKGPASMRAYFVLYHEVVLCNFLETLLYHDYGVA-ACGDHALELVDYCARKLTRLNSRHGLDQPLAAGMEEADEKGSLREQA----EKRASATAESELTAQLQETELAVCLAALRIARFLAEHLEKLPLAAFGRMCETHDVLMLTVPLLDNPPWAR 275          
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A329T1X1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1X1_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.230e-57
Identity = 109/237 (45.99%), Postives = 150/237 (63.29%), Query Frame = 1
Query:  133 EAEHFVESLREFSIEEIGNSS-WFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRR 840
            EAE  VE L + ++E+IG S+ W E +  + KLNLQAHQSA  + D +V+E+LLTFDK   ++  LL++E WK  VLP L   D+      ++RLYF +YHEATL NLL+VA FH H+ E    DLL+EL DYC RK++ L+      + R     +  +    + + +   SP EE++  + E EFRV V  V +LR++ E LH LPL V++R+LD HD LL LV LVENPPWT +
Sbjct:   15 EAEQIVERLEDQTLEQIGRSTQWLEHHHAMEKLNLQAHQSAQRKQDNFVVESLLTFDKFPTVIGNLLSLELWKANVLPLLQCQDK---DAASLRLYFAVYHEATLTNLLEVAFFHEHVVESLTDDLLLELVDYCMRKLSWLVG---LPRERIAEATSFHKTGSELVQMMKAQSPREELQRQRMEIEFRVAVQTVTILRYVAERLHVLPLSVVSRLLDKHDALLTLVALVENPPWTHK 245          
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A8J2WZ86_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ86_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.380e-57
Identity = 114/281 (40.57%), Postives = 170/281 (60.50%), Query Frame = 1
Query:   31 PKSDWSLPTRP--GLHI-EDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLET-----DRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTEE 849
            PKS WS+P     G+ I +D +E  G A+    L V+EAE  VE+L EF ++++GN  W EQ+ ++ KLN QAH SA  +SDE+VLEA LTFDKLG ++++L+ IE W+E V P L+E      +   +    MR YF LYHEAT+ NLL+   +H H    A  D  ++L DYCAR++  L S   + +  +P   N  E   +  ++L   +  EE+     + EF V V+ VAL+R +CEH+  L +  ++R++D HD LL ++ L+E+PPWTR  ++
Sbjct:    8 PKSQWSVPEERLGGIEIAQDRDESFGGAHC---LSVDEAERIVENLTEFDLQDVGNKQWLEQHGQIEKLNQQAHASARDKSDEFVLEAFLTFDKLGTLIYDLILIETWRERVYPLLVEHLVGGGENEATRSRAMRAYFVLYHEATVVNLLECLCYHAHAVG-AVKDASLDLTDYCARRLAALHSRAKAFRELNPAR-NPDEKPADFADKLKNRTAREELEEQALQIEFTVSVSCVALVRMVCEHVGELTVAAVSRIVDKHDFLLSVIPLIEHPPWTRARQD 283          
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: G4YIR3_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIR3_PHYSP)

HSP 1 Score: 202 bits (514), Expect = 4.920e-57
Identity = 110/237 (46.41%), Postives = 148/237 (62.45%), Query Frame = 1
Query:  133 EAEHFVESLREFSIEEIGNSS-WFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRR 840
            EAE  VE L+E + E+IG S+ W E +  + KLNLQAHQSA  + D +V+E+LLTFDK   ++  LL++E WK  VLP L   D+      ++RLYF +YHEATL NLL+VA FH H+ E    DLL+EL DYC RK++ L+      + R   G    +    + + +   SP EE+   + E EFRV V  V +LR++ E L  LPL V++R+LD HD LL LV LVENPPWT +
Sbjct:   14 EAEQIVERLQEQTPEQIGRSTQWLEHHHAMEKLNLQAHQSAQRKQDNFVVESLLTFDKFPTVISNLLSLELWKANVLPLLRCQDK---DAASLRLYFVVYHEATLTNLLEVAFFHEHVVESLSDDLLLELVDYCMRKLSWLVG---LPRERITEGTIFHKTGSELVQMVQAQSPREELERQRMEIEFRVAVQTVTILRYVAERLQALPLSVVSRLLDKHDALLTLVALVENPPWTHK 244          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH17_ECTSI9.850e-18695.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZG21_9STRA2.950e-10459.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SG05_9ARCH9.100e-7146.18Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1CRR6_9STRA2.910e-6547.08Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2RNA9_9STRA2.490e-6143.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W2KZ45_PHYPR4.510e-5847.06Uncharacterized protein n=7 Tax=Phytophthora paras... [more]
A0A7S1UIN4_9STRA1.160e-5741.88Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A329T1X1_9STRA1.230e-5745.99Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A8J2WZ86_9STRA1.380e-5740.57Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
G4YIR3_PHYSP4.920e-5746.41Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1231contigEcto-sp13_S_contig1231:13670..18156 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score530.0
Seed ortholog evalue6.7e-148
Seed eggNOG ortholog2880.D7FH17
Preferred nameZMYND10
Model size849
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001578,GO:0003008,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0005886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007600,GO:0007605,GO:0008150,GO:0008270,GO:0009987,GO:0010638,GO:0015630,GO:0016020,GO:0016043,GO:0016324,GO:0019230,GO:0022607,GO:0030030,GO:0030031,GO:0030317,GO:0031344,GO:0031346,GO:0032501,GO:0033043,GO:0034451,GO:0034622,GO:0035082,GO:0036158,GO:0036159,GO:0036477,GO:0040011,GO:0043025,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044458,GO:0044459,GO:0044464,GO:0044782,GO:0045177,GO:0045724,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048870,GO:0050789,GO:0050794,GO:0050877,GO:0050884,GO:0050905,GO:0050954,GO:0051128,GO:0051130,GO:0051179,GO:0051674,GO:0060271,GO:0060491,GO:0065003,GO:0065007,GO:0070286,GO:0070925,GO:0071840,GO:0071944,GO:0097458,GO:0097722,GO:0098590,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:1902017,GO:1902115,GO:1902117,GO:1905503,GO:1905505
Exons6
EggNOG free text desc.positive regulation of motile cilium assembly
EggNOG OGs28JQ5@1,2QS3F@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_003150.1
Cds size849
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1231.1939.1prot_Ecto-sp13_S_contig1231.1939.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1231 13670..18156 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462655.617921-CDS-Ecto-sp13_S_contig1231:13669..137501681462655.617921-CDS-Ecto-sp13_S_contig1231:13669..13750Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1231 13670..13750 +
1681462655.6297946-CDS-Ecto-sp13_S_contig1231:14566..146791681462655.6297946-CDS-Ecto-sp13_S_contig1231:14566..14679Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1231 14567..14679 +
1681462655.640607-CDS-Ecto-sp13_S_contig1231:15463..156201681462655.640607-CDS-Ecto-sp13_S_contig1231:15463..15620Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1231 15464..15620 +
1681462655.649836-CDS-Ecto-sp13_S_contig1231:16320..165291681462655.649836-CDS-Ecto-sp13_S_contig1231:16320..16529Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1231 16321..16529 +
1681462655.6586165-CDS-Ecto-sp13_S_contig1231:16971..170711681462655.6586165-CDS-Ecto-sp13_S_contig1231:16971..17071Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1231 16972..17071 +
1681462655.6668296-CDS-Ecto-sp13_S_contig1231:17967..181561681462655.6668296-CDS-Ecto-sp13_S_contig1231:17967..18156Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1231 17968..18156 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1231.1939.1

>prot_Ecto-sp13_S_contig1231.1939.1 ID=prot_Ecto-sp13_S_contig1231.1939.1|Name=mRNA_Ecto-sp13_S_contig1231.1939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp
MSTATAAAGVPKSDWSLPTRPGLHIEDENEYAGAANAAPVLYVEEAEHFV
ESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFD
KLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLAN
LLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGN
AREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRL
PLGVMTRVLDTHDVLLGLVILVENPPWTRRTEE
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mRNA from alignment at Ecto-sp13_S_contig1231:13670..18156+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1231.1939.1 ID=mRNA_Ecto-sp13_S_contig1231.1939.1|Name=mRNA_Ecto-sp13_S_contig1231.1939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4487bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1231:13670..18156+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCACAGCGACGGCGGCGGCAGGAGTGCCCAAGAGTGATTGGTCTCT GCCTACCCGACCGGGTCTGCATATCGAAGATGTGAGTCTCGCGAGCCGAC GATGTTCATCTCTTTCCCCTTTCAGCATCAGTTGTACAAGGAGGCGTCCG TTGTGAGACCCAGAGTGCAGGTGGTGTACAATTTACAGCAGTTGTACACA TAGATACGGTCATCGTCCCCGTTCTGTCCTCCCTTTCCACCACCCTTGAC TGTGGTAGACGGCAACGTTGAACATCGCAGTCGTTGCTCCGTCCAGCTGC ATTGGAATCCACCGGTGAGAATCACATACTGCTGTAGCGTGCACAGAGAG ACGTGCATCCCGGACATGTGTCCTCAAGTGTATCTTCGTCAGATCGTTCT AGTGGATCCAAAGATAAAACAGCAGTACCGCCGGTACCTCGAGGCCTAAA AGCCACATGTTCACAAGTATAGTAGTGGTAGATATGCTTCGGTCGTTTGG TTCCTGCCCAACACGGCAGACGTTTTGTGCTGAAAAAAATGCGGCATCCA GCATCACTGCTTTCTTTTTGAAACTTGTATGGACCGGTGCTTTCGCCGCT CGCTCCATGTTATCCGCTGCCACTGGCTGCTGCGCTGCTGCGTGTGATAC AGCCGTGCCGGCCGGCTAGAAAGAAGTATGTTCGCAAGGAGCCGAGGCTC AGATTTTAGACAAAATTACGCAAAATGCCCTGCGAAAGTGAGCATAGAGG CCGGCGGTATGTTAATTCTACTGCTGTAGTCTACGAAGCCTTCTTTGTAG TCTAGTGGGGACGAAGACAAAATATTGAATGGTTTTGAGCCTCGCTCGAA GTTGGTGTTTCTTTGTGAACGAGCCGGCACTGTACGCACCGATCCAGGAA AACGAGTACGCGGGGGCAGCGAACGCAGCGCCGGTTCTGTATGTGGAGGA GGCAGAGCACTTTGTGGAGAGCTTGCGAGAGTTCTCTATTGAAGAGATTG GGAACAGCAGGTGCGAAAGTAAGGATTACTTTCTTGTGACTGCTCTCTCT GCTGTGCGTGCACAATAATTGCTATACTGGTGTAGCCCCCATCCATGAAA CTTCATACACCGCGTGGTACATCTGAAGCGATCTCTGCCGTCCAAGCTCC CGAGTTGGGGTGAGGTGTGCGTGACAGCAGTGCAAGTGCGAGGGGTGTAC TAATCTCGCAAGCAACCTAAAACAAAGCCTGCAGCAGCATGTAGCCTATG TGAACCACAACAGCAGCAGTGCGATGCAGCGAAGCCCGTCTTCCTGGTTT CTCACAGGCACGTACGTGCGCGTTCAATTGGTAGGTTCAAACGTTCCAGG TTTACGTGCGCATTGTTTTTAGCATGCACTGCTCCCTTCGTGACTCTGCC GTCTGACGGCATGCACTCAAGTGCGGGGACGATTTCGCCTATCTTTCCAC GGCTGTCACGGACAGTTCAAATTTATTTCTGCATAGACTCAACCAGCTCA CGGTAAGTTGGATGGCGCCCTGCCCATCCCTCTCCCCTGTTCTACTCTCC CAACACAGTAGGGGGGCCGATGTATGGCCCCATAAATAAGGTCACGTGCC CTTTGTAGGGCCGGTGAAATTGCTTGGCACAGCCTGAGTAACCAAATTGT CCTCTACCCTGAAAAATACTGGGTGCCCTGTCTAAGGCCTGTGTTTGCCT GCCCTTTGAACCTTACATCGGGCACTGTGCTTCGCCACCGATTCCTCCCC CAACCACGCGCCCCACCCGACATCTCGTGCGACTTACTTTGCAGCTGGTT CGAGCAAAACCGCCGACTGGCAAAGCTCAACCTTCAGGCTCACCAGAGTG CGATGGCGAGATCCGACGAGTACGTCCTCGAGGCCCTGTTGACGTTTGAC AAGCTTGGCGTCATCGTGCACGAGCTGCTGGCCATCGAGGCGTGGAAGGA GGTTGGTGACAACAAGCCGCACTGGCGGAGTGTGTACGCCCTCGCGTTTG GCTGCTGGTTCACGCTCCGTCTTGGCTGGTGATATGAAATAAGCTACTAT TTCCTGCCACTATTTAGTGGCAGACCCTTCATACCAAGGGGTCTGCAGAC GGGCTGCTCTGAACTGCTGCTCTTGCGTTTGCGTGTCCGATGCTCGTCGC GAGGGCAGCGGGCGCGATAGATTATTTGCGTGGTTGTGGACGAACGTACG TGTAAAAATGTCGTTGAGCTCCATGAGCACACGGCTGCCCTCGTAGATCC ATGAAGTTTTTTTTTTTTTGTCGCAAAGTCCGAAGCGCGAACAAGAAGGC TGCCTCCAAGACCAGACAGGCTATACCACGACAGCACCGCAGGTGGCATG GAAAACAAGCACACGGAAACATTGACGTTTTTCGTCGTGAAGCAGGTTCA TGCTCCATGCCGCGATACCAGCCGTTGCTGGTGGTTCTTCCGAGACAAGC AGGACTGGGACTGACAGCAGCATACCCACACCGTCCGTACTCTTGTATCT GCCACATACCCACACCCAATCCCGCCGCGGAAGCACAACAACAATGTCTA CCGCCCTTCCTGCCCAACTGACCCACAGCCGTGCAAACGATTGAGAAACC CTCCCTTCCAACACACCCCACCCACGGTTTTTTGTGATGACGTCATTGCA GTTCGTTCTCCCCCGGCTGTTGGAGACGGACCGTGCAAGGTCGGGCAAGT GCACGATGCGGCTCTACTTCACCCTCTACCACGAGGCCACCCTCGCGAAC CTCCTGCAGGTCGCCTTGTTCCACGGGCACATCTGCGAGCAGGCGGGAGG AGACCTTCTCATGGAACTTGCCGACTACTGCGCTCGCAAGATGACCATGC TTATCTCCGGGTGGGTGTATTGTACGCCTCTTTTTGGCGTTTGTTCTGTC GGTTCGTGGGAACGCCTTGTCTTGCGTGTTTGTCTGTGTGTGTTTTTTTT TTTGCTCTGTTGGAGGGGTGCATGTTTCTCTTTTTGTTGTGCTCTGCTCG TGCGCGGCGCAGTCATTTTTGTACGGAAATGCGGAGTGTGGCTGATGGTC GCTTGGCAATTACCAGCTGTGATAGTAGGCTTTCCTAGCAAGCCAGAGCT CGAAACGGTAGCGTCGGCCGTTCCACTACGTGGCGGGATACTAACTGCCC ATTAGGCGTTCACGCCCGGCTTATCCTGCTTAGATTTGTGGCAGCACGCG GTCGATTGTATGTAGGTGTGCTACAACAATACACTCCAAGAGTACTCTGT GCGTTCCTGCGGCGAAACTTCGCGCGTGCTTCGCTGATCCCTGCCCTTTC AGGCGGGCCTCGAGCAAACCGCGGAGCCCCGTCGGCGGGAACGCCCGGGA GGTGGCGAAAAACATAGAGGAAAGGCTCTCTAAACTCTCTCCGGCGGAAG AGGTGAGTGCGTTGTGTCTCATCGTGTGCTTTTCAATCATTGGCATCGAC CGCGCTAACCGGCTAACCAATGAAAAACGTCAGCCTCCGAGTGTTGTGTG TGACTTTGTGTATGTTTTTTTTATTTTTTATTGGTGGGATAGGATCGACC GCGATAAGCGGCTGACCAATGAAAAGACGTCAGTCTCAGCGTAATGTGAG TGTTTCGTTGTTAGCATCGTACAGCACACTGTGTGTGTCTGTTTTTTTCG TTTCATCTGTTCCGGGTGTCAATGTAAACCTTTCGAGACACGTTTGAAGC ATCAGCCGGGGTCACGCCGGAGGAAGGCAAACGCAGCACTCATGTTCTTT TCTTCTCCACCTGTCCTTCTGCGACGCCATTGTTTTTCGATTATTTGGTT GCGGTTTCGGTTTCGATTGTCCAGCCGACCGCGTCGTTTCGTCGTGCTGC AAGAAAAGGGACGGCCCGCTCACGTTGTCGACGATCCATGCCATGCGTGC AGACTACCATGCGGGATTTTCGTATTTGTCGTGGAAGGGCAAAACTTGTT GATTCCCCATACTCCATAGAAGCTCTACATGGCTCTATGGGCAAACACTT TTGCCCTGATAAAGTGCGTAGGGGGTCATCTACACGCTTCTTTTGTTTAT CACCATTCCAGTGCTCATTCGTTTGTTTTTCTCTGCAAGACTACCGTCCC GCCGCAGTGCCTCCGTTTTGCCTCTTGTCGAAGCACAACGGCTCCATCCA TCCACCCATCCATCCGCGCGCATGCTTTCGTGCTTCTTTTCGACGCCAGT CTTGGCACCAACCAACCAGTAAACGGCCTCTCTCTAACCCCGTTGTGTCA TTGTTTTGGTCATATCGAATGGGGCTGGCTGGGCGGCCGGGCCTACAGAT CCGGGGCTACCAGGAGGAGACGGAGTTCCGGGTGTGCGTGACGGCAGTGG CCCTCCTCCGCTTCCTGTGCGAGCACCTGCACCGCCTTCCCCTCGGGGTG ATGACGAGAGTGCTGGACACCCACGACGTGCTTCTCGGCCTGGTTATCCT GGTGGAGAACCCGCCTTGGACCAGGCGGACAGAAGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1231:13670..18156+

>mRNA_Ecto-sp13_S_contig1231.1939.1 ID=mRNA_Ecto-sp13_S_contig1231.1939.1|Name=mRNA_Ecto-sp13_S_contig1231.1939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1231:13670..18156+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCACAGCGACGGCGGCGGCAGGAGTGCCCAAGAGTGATTGGTCTCT
GCCTACCCGACCGGGTCTGCATATCGAAGATGAAAACGAGTACGCGGGGG
CAGCGAACGCAGCGCCGGTTCTGTATGTGGAGGAGGCAGAGCACTTTGTG
GAGAGCTTGCGAGAGTTCTCTATTGAAGAGATTGGGAACAGCAGCTGGTT
CGAGCAAAACCGCCGACTGGCAAAGCTCAACCTTCAGGCTCACCAGAGTG
CGATGGCGAGATCCGACGAGTACGTCCTCGAGGCCCTGTTGACGTTTGAC
AAGCTTGGCGTCATCGTGCACGAGCTGCTGGCCATCGAGGCGTGGAAGGA
GTTCGTTCTCCCCCGGCTGTTGGAGACGGACCGTGCAAGGTCGGGCAAGT
GCACGATGCGGCTCTACTTCACCCTCTACCACGAGGCCACCCTCGCGAAC
CTCCTGCAGGTCGCCTTGTTCCACGGGCACATCTGCGAGCAGGCGGGAGG
AGACCTTCTCATGGAACTTGCCGACTACTGCGCTCGCAAGATGACCATGC
TTATCTCCGGGCGGGCCTCGAGCAAACCGCGGAGCCCCGTCGGCGGGAAC
GCCCGGGAGGTGGCGAAAAACATAGAGGAAAGGCTCTCTAAACTCTCTCC
GGCGGAAGAGATCCGGGGCTACCAGGAGGAGACGGAGTTCCGGGTGTGCG
TGACGGCAGTGGCCCTCCTCCGCTTCCTGTGCGAGCACCTGCACCGCCTT
CCCCTCGGGGTGATGACGAGAGTGCTGGACACCCACGACGTGCTTCTCGG
CCTGGTTATCCTGGTGGAGAACCCGCCTTGGACCAGGCGGACAGAAGAG
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