prot_Ecto-sp13_S_contig8054.19389.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8054.19389.1
Unique Nameprot_Ecto-sp13_S_contig8054.19389.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length473
Homology
BLAST of mRNA_Ecto-sp13_S_contig8054.19389.1 vs. uniprot
Match: A0A6H5JW70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW70_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 3.940e-68
Identity = 412/481 (85.65%), Postives = 420/481 (87.32%), Query Frame = 0
Query:    1 MVKECCQKGCVKRPSYGRYGSTKAEYCAQHAEDNMIDVRSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGSAVPVFXXXXXXXXXXXTRLAKFRSTRAPALHPPRPSPXXXXXXXXXXXXXXXXXXXXSAFRPSAFPAXXXXXXXXXXXXXX---------GAVGVKGQPARLDGSGGDVGGSVGGAWRPGGVGSAAAGVTEGISAAGGVGVEVGAAAAIGXXXXXXXXXXSPAAADADGAGDLLLALSGKTTGSWSRTPEPSAISRPSEPPAKRQKPEGDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEHDDRGEGEEEHAETRPQSINST 472
            MVKECC+KGCVKRPSYG+YGSTKAEYCAQHAEDNMIDVRSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKP+LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGSAVPVFXXXXXXXXXXXTRLAKFRSTRAPAL PPR   XXXXXXXXXXXXXXX     SAFRPSAFPA   XXXXXXXXXXX         GAVGVKGQPARLDGSGGDVGG VGGAWRPGG+ +AA G TEGISAAGGVGV         XXXXXXXXXXSPAAADADGA DLLLALSGKT GSW RTPEPS ISRPSEPPAKRQKPE DD+     XXXXXXXXXXXXXXX             P+HD  GE EEE AETRPQSI+ST
Sbjct:    1 MVKECCRKGCVKRPSYGKYGSTKAEYCAQHAEDNMIDVRSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKPELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGSAVPVFXXXXXXXXXXXTRLAKFRSTRAPALPPPRXX-XXXXXXXXXXXXXXXLPIVASAFRPSAFPAPAAXXXXXXXXXXXXXXXXXXXXGAVGVKGQPARLDGSGGDVGGGVGGAWRPGGIAAAAVGGTEGISAAGGVGVXXXXXXXXXXXXXXXXXXXSPAAADADGAEDLLLALSGKTAGSW-RTPEPSTISRPSEPPAKRQKPEEDDNDRDSGXXXXXXXXXXXXXXXDDQ----------PKHDVWGE-EEEQAETRPQSIDST 468          
BLAST of mRNA_Ecto-sp13_S_contig8054.19389.1 vs. uniprot
Match: D8LG50_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG50_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 8.620e-30
Identity = 317/473 (67.02%), Postives = 322/473 (68.08%), Query Frame = 0
Query:    1 MVKECCQKGCVKRPSYGRYGSTKAEYCAQHAEDNMIDVRSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGSAVPVFXXXXXXXXXXXTRLAKFRSTRAPALHPPRPSPXXXXXXXXXXXXXXXXXXXXSAFRPSAFPAXXXXXXXXXXXXXXGAVGVKGQPARLDGSGGDVGGSVGGAWRPGGVGSAAAGVTEGISAAGGVGVEVGAAAAIGXXXXXXXXXXSPAA-ADADGAGDLLLALSGKTTGSWSRTPEPSAISRPSEPPAKRQKPEGDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEHDDRGEGEEEHAETRPQSINST 472
            MVKECC+KGCVKRPSYG+YGSTKAEYCAQHAEDNMIDVRSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKP+LXXXXXXXXXXXX                                         + +S                                                         GAVGVKGQPARLDGSGG VGG    AWRPG                  VGVEVGAA    XXXXXXXXXX     ADADGAGDLLLALSGKTTGSWSRTPEP AISRPSEPPAKRQKPEGDD            XXXXXXXXXXXXXXXXXXXXX PEH   GE E E AETRPQSINST
Sbjct:    1 MVKECCRKGCVKRPSYGKYGSTKAEYCAQHAEDNMIDVRSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAKPELXXXXXXXXXXXX-----------------------------------------RIKSNGG------------------------------------------------------GAVGVKGQPARLDGSGGGVGG----AWRPGXXXXXXXXXXXXXXXXXXVGVEVGAAXXXXXXXXXXXXXXXXXXXADADGAGDLLLALSGKTTGSWSRTPEPPAISRPSEPPAKRQKPEGDD------------XXXXXXXXXXXXXXXXXXXXXQPEHGVGGEEEGEQAETRPQSINST 362          
BLAST of mRNA_Ecto-sp13_S_contig8054.19389.1 vs. uniprot
Match: A0A6H5JZ54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ54_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 9.700e-5
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    3 KECCQKGCVKRPSYGRYGSTKAEYCAQHAEDNMIDVRSKR 42
            + C + GC  RPSYGR  S KAE+C+QH E  MIDVRSK+
Sbjct:   27 RSCREHGCTTRPSYGRAHSKKAEFCSQHRERGMIDVRSKK 66          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8054.19389.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JW70_9PHAE3.940e-6885.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG50_ECTSI8.620e-3067.02EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JZ54_9PHAE9.700e-560.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8054contigEcto-sp13_S_contig8054:3763..6291 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8054.19389.1mRNA_Ecto-sp13_S_contig8054.19389.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8054 3763..6291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8054.19389.1 ID=prot_Ecto-sp13_S_contig8054.19389.1|Name=mRNA_Ecto-sp13_S_contig8054.19389.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=473bp
MVKECCQKGCVKRPSYGRYGSTKAEYCAQHAEDNMIDVRSKRCGHAGCTT
RPSYGINGTTKAQFCATHAADGMVNVRSKRCSHQGCTTRPSYGVDGTKKA
EYCTRHALANMVDVRSKRCGRQGCNTWPSYGVEGSNRAVFCARHADPHMV
DVCNKRCGTRGCTIRPSHGFEGSSAKPQLCQRHAEPGMIDVRIKRCGHRG
CEHPPTYGAPGSAVPVFCQRHSQVGMVRTRLAKFRSTRAPALHPPRPSPP
PSTTTPPLQQRQQKPPIVASAFRPSAFPAPAAAAAAAAFSAGGGAVGVKG
QPARLDGSGGDVGGSVGGAWRPGGVGSAAAGVTEGISAAGGVGVEVGAAA
AIGGGGSGGEDGGSPAAADADGAGDLLLALSGKTTGSWSRTPEPSAISRP
SEPPAKRQKPEGDDDDRDSGDNNGENNGDGDGDGDGGGGGDWNGDDDQPE
HDDRGEGEEEHAETRPQSINST*
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