mRNA_Ecto-sp13_S_contig1231.1939.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: D7FH17_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH17_ECTSI) HSP 1 Score: 529 bits (1362), Expect = 9.850e-186 Identity = 270/283 (95.41%), Postives = 275/283 (97.17%), Query Frame = 1
Query: 1 MSTATAAAGVPKSDWSLPTRPGLHIEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTEE 849
MSTAT AAGVPKSDWSLPTRPGL IEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGV+VHELLAIEAWKEFVLPRLLET+RARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPR NAREVAK+IEERL+KLSPAEE+RGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRR EE
Sbjct: 1 MSTATVAAGVPKSDWSLPTRPGLQIEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVVVHELLAIEAWKEFVLPRLLETERARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPR-----NAREVAKDIEERLAKLSPAEEVRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRAEE 278
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A835ZG21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG21_9STRA) HSP 1 Score: 319 bits (818), Expect = 2.950e-104 Identity = 163/274 (59.49%), Postives = 206/274 (75.18%), Query Frame = 1
Query: 28 VPKSDWSLPTRPG-LHIEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTE 846
PK DWSLP + G L IEDENEYA AA APVL V EAE + E+L F + ++G+S+W +Q++RL KLNLQAHQSAMAR+DEYVLEAL TF K+ ++V ELL +EAWKEF LP LL++ R RSG+C MRLYFTLYHEAT+ANLL+ AL+ H C +AG D L++L DYC RK+ +L S R SKP+ P +A+ +A +EER P +E+ ++ EFR CVTAV +LRF+CEH+ LPLGV TR+LDTHDVLLG+V L+ENPPWTRR +
Sbjct: 7 APKHDWSLPDKRGRLDIEDENEYASAAAGAPVLDVAEAERYAEALSAFDVTDVGSSAWLDQHQRLVKLNLQAHQSAMARADEYVLEALQTFGKVPLLVRELLLVEAWKEFALPDLLKSPRLRSGRCNMRLYFTLYHEATVANLLEAALYRRHACAEAG-DALVDLVDYCVRKIVLLNSTRRFSKPK-PEAADAKALAAELEER----DPVKELLAQADDVEFRCCVTAVTMLRFICEHIAALPLGVATRLLDTHDVLLGIVPLIENPPWTRRLD 274
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A482SG05_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SG05_9ARCH) HSP 1 Score: 233 bits (595), Expect = 9.100e-71 Identity = 121/262 (46.18%), Postives = 179/262 (68.32%), Query Frame = 1
Query: 70 HIEDENEYAGAANAAPVLY-VEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRS---PVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRT 843
H++ E+E + + PV+ EAE ++ESL+ F + E+G+ +W EQ+R++ KLNLQAH +A++ SDEYV+EA+LTF+K+ V++H+LL IEAWKE V P L E SG+ MRLYF LYHEAT+ N+L++ L++ H E AGG++++E+ DY ARK+ L +G + + R V + + AK + L +PAEE+ + ++ EFR+C++AVAL RFL EH LPL +R+ DTHD L+ L+ L+E PPWTRRT
Sbjct: 15 HMKIEDEVSAPLSGLPVVIDANEAERYIESLKCFELSEVGSRAWMEQHRKMEKLNLQAHHNALSNSDEYVMEAILTFNKIPVLIHDLLLIEAWKESVYPLLKEE---LSGRNNMRLYFILYHEATVVNMLEIFLYYKHFVE-AGGEVMIEVIDYVARKLIRLNNGSSEFRLRDLAQEVSASEPDAAKKLASALEARTPAEELDHHLQDIEFRICISAVALARFLSEHAEVLPLSCQSRMTDTHDYLVLLIPLIEQPPWTRRT 272
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A7S1CRR6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CRR6_9STRA) HSP 1 Score: 221 bits (562), Expect = 2.910e-65 Identity = 121/257 (47.08%), Postives = 167/257 (64.98%), Query Frame = 1
Query: 97 GAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRA--RSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRAS----SKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTEE 849
GA +L +AE ES+R FS+ E+G+S+W Q+ L K NLQAH +A D +V+EA+LTFDK+ V++HEL+A+EAW+EFV P LL + A R+G +RLY+T YHEATL NLL+V L+H + CE A GD L++L DYC RK++ L+ A+ K R + R +K A ++ + E+R VTAV+LLR++ EH+ +LPLGVM RVLDTHDV++ +V L+ENPPWTRRT E
Sbjct: 17 GADLGVGILLPGDAERIAESIRGFSVREVGSSAWMRQHEALEKANLQAHANARGNRDPFVMEAMLTFDKMTVLIHELMAVEAWREFVFP-LLRSGGAVERNG---LRLYYTFYHEATLVNLLEVFLYHDYACE-AAGDALIDLVDYCCRKVSWLVMRGATPAEAKKSREEIVAEMRGDXXXXXXXGAKSVAARDMEARLNDIEYRCAVTAVSLLRYITEHIAKLPLGVMGRVLDTHDVMIMMVPLIENPPWTRRTPE 268
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A7S2RNA9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNA9_9STRA) HSP 1 Score: 213 bits (543), Expect = 2.490e-61 Identity = 122/280 (43.57%), Postives = 165/280 (58.93%), Query Frame = 1
Query: 16 AAAGVPKSDWSLPTRPGLHIEDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMT-MLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPA-EEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTEE 849
AA P+ WSL RP + I +E AAP+ EAE +E+L EF + ++G+S W +Q+ + +LNLQAHQSA + DE+VLEALLTFDKL +VHELL EAW+ V PR+ + GK TMR YF LYHEATL NLL V + H H E G + ++L DY +R++ M R SK +A K + + A ++ E+ F++ V L R+LCEHL+ LPL V+TR DTHD+L +V L+ENPPWTRRT++
Sbjct: 5 AAGARPEHAWSLKDRPTMAIGEETSTPDGVPAAPLFSPWEAEQRIETLAEFDVADVGSSLWMKQHEAIEQLNLQAHQSAQQQGDEFVLEALLTFDKLRTLVHELLVTEAWRVNVFPRIKKA--LVDGKATMRGYFCLYHEATLVNLLCVCMHHVHATESLG-ETAVDLVDYVSRRLVEMNAKARVWSKRAEGGSKSAEASVKAVAAATEPVGDALADLENQAEDILFQLSVATTTLARYLCEHLNTLPLSVLTRATDTHDLLCCIVPLIENPPWTRRTKD 281
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: W2KZ45_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KZ45_PHYPR) HSP 1 Score: 205 bits (521), Expect = 4.510e-58 Identity = 112/238 (47.06%), Postives = 151/238 (63.45%), Query Frame = 1
Query: 133 EAEHFVESLREFSIEEIGNSS-WFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRT 843
EAE VE L S+E+IG S+ W E ++ + KLNLQAHQSA + D +V+E+LLTFDKL ++ LL++E WK VLP L D+ ++RLYF +YHEA L NLL+VA FH HI E DLL+EL DYC RK++ L+ + R + + + + + SP EE++ + E EFRV V V +LR++ E LH LPL V++R+LD HD LL LV LVENPPWT +T
Sbjct: 15 EAEQIVERLVGQSLEQIGRSTQWLEHHQAVEKLNLQAHQSAQRKQDNFVVESLLTFDKLPTVISNLLSLELWKANVLPLLRCQDK---DAASLRLYFVIYHEAALTNLLEVAFFHEHIVESLTDDLLVELVDYCVRKLSWLVG---LPRERIAEATSFHKTGPELVQMMKAQSPREELQRQRMEIEFRVAVQTVTILRYIAERLHVLPLSVVSRLLDKHDALLTLVALVENPPWTHKT 246
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A7S1UIN4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIN4_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.160e-57 Identity = 116/277 (41.88%), Postives = 163/277 (58.84%), Query Frame = 1
Query: 31 PKSDWSLPTRPGLHIEDENEYAGAANAAPV--LYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKP------RSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTR 837
P W+LP + L I DE ++A + P+ L EEAE VE LR F ++G +W Q++ + +LN+QAH SA A +DE+V+EA+LTF+KL +V ELL IEAWKE LP+++ + G +MR YF LYHE L N L+ L+H + A GD +EL DYCARK+T L S +P + G+ RE A E+ + + E+ +ETE VC+ A+ + RFL EHL +LPL R+ +THDVL+ V L++NPPW R
Sbjct: 7 PAHSWTLPQQ-HLDIVDEVDHANDVDGIPITLLQAEEAERLVEGLRAFGPNDVGGPAWMAQHQNIQRLNMQAHASAKANADEFVVEAVLTFEKLPTLVRELLLIEAWKEQALPKII--SKVDKGPASMRAYFVLYHEVVLCNFLETLLYHDYGVA-ACGDHALELVDYCARKLTRLNSRHGLDQPLAAGMEEADEKGSLREQA----EKRASATAESELTAQLQETELAVCLAALRIARFLAEHLEKLPLAAFGRMCETHDVLMLTVPLLDNPPWAR 275
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A329T1X1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1X1_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.230e-57 Identity = 109/237 (45.99%), Postives = 150/237 (63.29%), Query Frame = 1
Query: 133 EAEHFVESLREFSIEEIGNSS-WFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRR 840
EAE VE L + ++E+IG S+ W E + + KLNLQAHQSA + D +V+E+LLTFDK ++ LL++E WK VLP L D+ ++RLYF +YHEATL NLL+VA FH H+ E DLL+EL DYC RK++ L+ + R + + + + + SP EE++ + E EFRV V V +LR++ E LH LPL V++R+LD HD LL LV LVENPPWT +
Sbjct: 15 EAEQIVERLEDQTLEQIGRSTQWLEHHHAMEKLNLQAHQSAQRKQDNFVVESLLTFDKFPTVIGNLLSLELWKANVLPLLQCQDK---DAASLRLYFAVYHEATLTNLLEVAFFHEHVVESLTDDLLLELVDYCMRKLSWLVG---LPRERIAEATSFHKTGSELVQMMKAQSPREELQRQRMEIEFRVAVQTVTILRYVAERLHVLPLSVVSRLLDKHDALLTLVALVENPPWTHK 245
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: A0A8J2WZ86_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ86_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.380e-57 Identity = 114/281 (40.57%), Postives = 170/281 (60.50%), Query Frame = 1
Query: 31 PKSDWSLPTRP--GLHI-EDENEYAGAANAAPVLYVEEAEHFVESLREFSIEEIGNSSWFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLET-----DRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRRTEE 849
PKS WS+P G+ I +D +E G A+ L V+EAE VE+L EF ++++GN W EQ+ ++ KLN QAH SA +SDE+VLEA LTFDKLG ++++L+ IE W+E V P L+E + + MR YF LYHEAT+ NLL+ +H H A D ++L DYCAR++ L S + + +P N E + ++L + EE+ + EF V V+ VAL+R +CEH+ L + ++R++D HD LL ++ L+E+PPWTR ++
Sbjct: 8 PKSQWSVPEERLGGIEIAQDRDESFGGAHC---LSVDEAERIVENLTEFDLQDVGNKQWLEQHGQIEKLNQQAHASARDKSDEFVLEAFLTFDKLGTLIYDLILIETWRERVYPLLVEHLVGGGENEATRSRAMRAYFVLYHEATVVNLLECLCYHAHAVG-AVKDASLDLTDYCARRLAALHSRAKAFRELNPAR-NPDEKPADFADKLKNRTAREELEEQALQIEFTVSVSCVALVRMVCEHVGELTVAAVSRIVDKHDFLLSVIPLIEHPPWTRARQD 283
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Match: G4YIR3_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIR3_PHYSP) HSP 1 Score: 202 bits (514), Expect = 4.920e-57 Identity = 110/237 (46.41%), Postives = 148/237 (62.45%), Query Frame = 1
Query: 133 EAEHFVESLREFSIEEIGNSS-WFEQNRRLAKLNLQAHQSAMARSDEYVLEALLTFDKLGVIVHELLAIEAWKEFVLPRLLETDRARSGKCTMRLYFTLYHEATLANLLQVALFHGHICEQAGGDLLMELADYCARKMTMLISGRASSKPRSPVGGNAREVAKNIEERLSKLSPAEEIRGYQEETEFRVCVTAVALLRFLCEHLHRLPLGVMTRVLDTHDVLLGLVILVENPPWTRR 840
EAE VE L+E + E+IG S+ W E + + KLNLQAHQSA + D +V+E+LLTFDK ++ LL++E WK VLP L D+ ++RLYF +YHEATL NLL+VA FH H+ E DLL+EL DYC RK++ L+ + R G + + + + SP EE+ + E EFRV V V +LR++ E L LPL V++R+LD HD LL LV LVENPPWT +
Sbjct: 14 EAEQIVERLQEQTPEQIGRSTQWLEHHHAMEKLNLQAHQSAQRKQDNFVVESLLTFDKFPTVISNLLSLELWKANVLPLLRCQDK---DAASLRLYFVVYHEATLTNLLEVAFFHEHVVESLSDDLLLELVDYCMRKLSWLVG---LPRERITEGTIFHKTGSELVQMVQAQSPREELERQRMEIEFRVAVQTVTILRYVAERLQALPLSVVSRLLDKHDALLTLVALVENPPWTHK 244 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1231.1939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1231.1939.1 >prot_Ecto-sp13_S_contig1231.1939.1 ID=prot_Ecto-sp13_S_contig1231.1939.1|Name=mRNA_Ecto-sp13_S_contig1231.1939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp MSTATAAAGVPKSDWSLPTRPGLHIEDENEYAGAANAAPVLYVEEAEHFVback to top mRNA from alignment at Ecto-sp13_S_contig1231:13670..18156+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1231.1939.1 ID=mRNA_Ecto-sp13_S_contig1231.1939.1|Name=mRNA_Ecto-sp13_S_contig1231.1939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4487bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1231:13670..18156+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1231:13670..18156+ >mRNA_Ecto-sp13_S_contig1231.1939.1 ID=mRNA_Ecto-sp13_S_contig1231.1939.1|Name=mRNA_Ecto-sp13_S_contig1231.1939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1231:13670..18156+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |