prot_Ecto-sp13_S_contig8043.19377.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8043.19377.1
Unique Nameprot_Ecto-sp13_S_contig8043.19377.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length206
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8043.19377.1 vs. uniprot
Match: D7FTQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ4_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 4.650e-125
Identity = 183/206 (88.83%), Postives = 196/206 (95.15%), Query Frame = 0 
Query:    1 LDTGGFNTGLNFGYCTLLVMEELEVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEANELVTAYILTGNAGQGSDRIRWILGLIFVCLTLAMIRHDTRKWCRAKRTKARRNKCHCCCGFTFFTLIILNVLMWLGWASLGQDIAFDVVLQNTG-EEGSVLDALTGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQ 205
            ++TGGFN GLNFGYCTLLVME+L+VIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEA+ELVTAYILTGNAGQG+DRIRWILGLIFVC+TLAMIRHDT+KW RA+  KARRNKCHCCCGFTFFTLIILNVLMWLGWASLG+ IAFDVVLQ T  EE SV+ ALTGQ+LALQEAALFSW+LHIIFLLTTLAGLYRWIFQ
Sbjct:  320 IETGGFNIGLNFGYCTLLVMEDLDVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEAHELVTAYILTGNAGQGNDRIRWILGLIFVCMTLAMIRHDTKKWYRARHAKARRNKCHCCCGFTFFTLIILNVLMWLGWASLGKVIAFDVVLQGTSSEEDSVMAALTGQILALQEAALFSWSLHIIFLLTTLAGLYRWIFQ 525
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BLAST of mRNA_Ecto-sp13_S_contig8043.19377.1 vs. uniprot
Match: A0A6H5JEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ3_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.350e-23
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0 
Query:   10 LNFGYCTLLVMEELEVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDH 60
            LNFGYCTLLVME+L+VIPR EVRSVNVQLVTYNGNQGSAFGSIN+GFTFDH
Sbjct:   59 LNFGYCTLLVMEDLDVIPRHEVRSVNVQLVTYNGNQGSAFGSINLGFTFDH 109
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BLAST of mRNA_Ecto-sp13_S_contig8043.19377.1 vs. uniprot
Match: A0A6H5JIW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW8_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 7.000e-15
Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 0 
Query:  151 IAFDVVLQNTGEEG-SVLDALTGQVLALQEAALFSWALHIIFLLTTLAGLYRWIFQ 205
            +AFDVVLQ+T  E  SVL ALTG +LALQEA LFSW+L+IIFLLTTLAGLY WIFQ
Sbjct:    1 MAFDVVLQDTSSEADSVLGALTGPILALQEAELFSWSLYIIFLLTTLAGLYPWIFQ 56
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8043.19377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTQ4_ECTSI4.650e-12588.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEJ3_9PHAE1.350e-2392.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIW8_9PHAE7.000e-1576.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..144
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 204..206
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..121
NoneNo IPR availableTMHMMTMhelixcoord: 85..102
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 182..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8043contigEcto-sp13_S_contig8043:2400..7112 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8043.19377.1mRNA_Ecto-sp13_S_contig8043.19377.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8043 2399..7112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8043.19377.1 ID=prot_Ecto-sp13_S_contig8043.19377.1|Name=mRNA_Ecto-sp13_S_contig8043.19377.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp
LDTGGFNTGLNFGYCTLLVMEELEVIPRDEVRSVNVQLVTYNGNQGSAFG
SINIGFTFDHGGEVEANELVTAYILTGNAGQGSDRIRWILGLIFVCLTLA
MIRHDTRKWCRAKRTKARRNKCHCCCGFTFFTLIILNVLMWLGWASLGQD
IAFDVVLQNTGEEGSVLDALTGQVLALQEAALFSWALHIIFLLTTLAGLY
RWIFQA
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