prot_Ecto-sp13_S_contig80383.19368.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80383.19368.1
Unique Nameprot_Ecto-sp13_S_contig80383.19368.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig80383.19368.1 vs. uniprot
Match: D8LHR8_ECTSI (CTLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR8_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 3.140e-24
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 
Query:    5 RFFPTILVSGSHPVRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASN 53
            RFFPTILVSGSHPVRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASN
Sbjct:  706 RFFPTILVSGSHPVRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASN 754
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80383.19368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHR8_ECTSI3.140e-24100.00CTLH domain-containing protein n=2 Tax=Ectocarpus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 7..53
e-value: 2.6E-6
score: 28.6
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 14..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80383contigEcto-sp13_S_contig80383:456..614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80383.19368.1mRNA_Ecto-sp13_S_contig80383.19368.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80383 456..614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80383.19368.1 ID=prot_Ecto-sp13_S_contig80383.19368.1|Name=mRNA_Ecto-sp13_S_contig80383.19368.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
PPPRRFFPTILVSGSHPVRSVGFSADGGLFAVGCNDRTLRVCKTPSEAEL
ASN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam