mRNA_Ecto-sp13_S_contig8037.19366.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8037.19366.1
Unique NamemRNA_Ecto-sp13_S_contig8037.19366.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: A0A6H5JIJ9_9PHAE (PHS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIJ9_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 2.080e-128
Identity = 187/191 (97.91%), Postives = 189/191 (98.95%), Query Frame = 1
Query:  208 MVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFLGLSGALRWVFVYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVDWAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAILYAAGMQTLIN 780
            MVTLGFFVILPL+WQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFLGLSGALRWVFVY SI ALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVDWAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCP+NFPRAILYAAGMQTLIN
Sbjct:    1 MVTLGFFVILPLVWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFLGLSGALRWVFVYGSITALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVDWAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPRNFPRAILYAAGMQTLIN 191          
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: A0A0D2M1A6_9CHLO (Arginine/agmatine antiporter n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M1A6_9CHLO)

HSP 1 Score: 163 bits (413), Expect = 3.350e-44
Identity = 96/243 (39.51%), Postives = 135/243 (55.56%), Query Frame = 1
Query:   58 DEDEENGYTPSVPAASAKHSLSFGALVFLIYYNI-GVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIAD-----FLGLSGALRWV-FVYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVD---WAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAILYA 756
            D ++ +   P V A  A+  LS   L+ LI++ + G PFG E+AV AAGP +V LGF ++ PL+W +P   +TAEL T F ++ G +AWV+ AFG  WGF +  WS+ +   DN++YP+++AD     F  LSG  + V FV     ALT+  YRG  VV +A      F + P VL+      RVD   W  V  P     V W  F+ IMFW   YW  V+ +  +V    K FPRA+++A
Sbjct:   17 DVEQGDAAEPGVAAPHARRPLSLLPLIALIFFEVSGGPFGTEDAVAAAGPLLVILGF-IVFPLIWSVPEALITAELATAFPENSGYVAWVSAAFGPFWGFQEGWWSWLSGVTDNSIYPVMLADNLRLFFPALSGGWQRVAFVVCLSVALTYMNYRGLQVVGNAALTTTLFIIAPFVLLCAFAAPRVDPSNWLKVDLP----SVQWGTFLNIMFWNLNYWDSVSCLAGEVDKPHKTFPRALMWA 254          
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: A0A6I9QCD6_ELAGV (polyamine transporter RMV1 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9QCD6_ELAGV)

HSP 1 Score: 152 bits (385), Expect = 3.110e-39
Identity = 90/260 (34.62%), Postives = 139/260 (53.46%), Query Frame = 1
Query:   22 NGGSLKAPLIGWDE-DEENGYTPSVPAASAKHSLSFGALVFLIYYNI-GVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFL-----GLSGALRWVF-VYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVD------WAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAILYAA 759
            NG +   P+    + +++N    + P  +  H +S   LVFLI+Y + G PFG E+ V+AAGP +  LGF VI P +W +P   +TAE+ T F ++ G + WV+ AFG  WGF      + +  +DNALYP++  D+L        G L   F V+   A LT+  YRG AVV      +  F++LP ++M   GL          W  V       +V+WRL++  +FW   YW  ++++  +V D  K+ P+++LYAA
Sbjct:   70 NGQASSVPMDDHGQLNQQNTVDTAAPTVNNIHKVSIVPLVFLIFYEVSGGPFGMEDTVQAAGPLLAILGF-VIFPFLWSIPEALITAEMGTMFPENGGYVVWVSSAFGPYWGFQLGWMKWLSGVIDNALYPVLFLDYLKSVIPAFQGGLPRTFAVFGLTAVLTYMNYRGLAVVGWVAVFLGVFSILPFIIM---GLMATPKLRPERWLVVDL----HNVNWRLYLNTLFWNLNYWDSISTLAGEVDDPKKSLPKSLLYAA 321          
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: A0A8J9WRS2_9CHLO (Polyamine transporter PUT1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRS2_9CHLO)

HSP 1 Score: 150 bits (380), Expect = 1.270e-38
Identity = 83/221 (37.56%), Postives = 128/221 (57.92%), Query Frame = 1
Query:  133 LVFLIYYNI-GVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFLG------LSGALRWVFVYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRV---DWAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAILYAAGM 765
            LV L++Y + G PFG E+AV +AGP +  LGF +ILP +W +P   VTAEL T F +  G +AWVT AFG  WGF +  WS+ +   DN++YP++   +L       L G  R   ++++   L++  YRG  +V  A   +  F +L  ++++GL + R+   +W  V      D ++WR FI +MFW   YW  V+++  +V +  K FPRA+L A G+
Sbjct:   53 LVALVFYEVSGGPFGTEDAVTSAGPLVALLGF-LILPFVWSVPEALVTAELATAFPEDSGYVAWVTAAFGPFWGFQEGWWSWLSGVTDNSVYPVLFLSYLDAVVPGLLQGWARSACLFATSILLSYLNYRGLTIVGRAAIGMTLFIVLTFLVLIGLSIPRLHPSNWLIVDW----DTIEWRPFINVMFWNLNYWDSVSTLAGEVANPGKTFPRALLMAVGL 268          
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: A0A175YI16_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YI16_DAUCS)

HSP 1 Score: 150 bits (379), Expect = 2.040e-38
Identity = 85/239 (35.56%), Postives = 133/239 (55.65%), Query Frame = 1
Query:   88 SVPAASAKHSLSFGALVFLIYYNI-GVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFL--GL----SGALRWVFVYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVD---WAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAILYAAGMQTL 774
            ++P     + +S   L+FLI+Y + G PFG E++V AAGPF+  LGF V+ PL+W +P   +TAE++T F ++ G + WV+ A G  WGF      + +  +DNALYP++  D+L  G+    SG  R   V      LT+  YRG  +V     L+  F++LP ++M  + + ++    W  V       DVDW L++  +FW   YW  V+++  +V +  KN P+A+LYA  M  L
Sbjct:   90 TLPRLDRTNKVSLIPLIFLIFYEVSGGPFGVEDSVGAAGPFLALLGF-VVFPLIWSVPEALITAEMSTMFPENAGYVVWVSTALGPYWGFQQGWMKWLSGVIDNALYPILFLDYLKSGIPAVASGIPRVAAVLVLTVVLTYMNYRGMTIVGWVAILLGVFSILPFIVMGFISIPKIQPSRWLVVDL----HDVDWSLYLNTLFWNLNYWDSVSTLAGEVHNPKKNLPKALLYALIMVVL 323          
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: A0A7I8KCM6_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KCM6_SPIIN)

HSP 1 Score: 149 bits (375), Expect = 3.130e-38
Identity = 79/218 (36.24%), Postives = 126/218 (57.80%), Query Frame = 1
Query:  133 LVFLIYYNI-GVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFLGLS-------GALRWVFVYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVDWAAVATPPA--ADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAILYA 756
            LVFLI+Y + G PFG E++V+AAGPF+  LGF ++ PL+W +P   +TAE+ T F ++ G + WV+ A G  WGF      + +  +DNALYP++  D+L  S       GA R + V +  AALT+  YRG  +V      +  F++LP  +M  L + R++ +    PP      VDW L++  +FW   YW  ++++  +V++  +  PRA+ +A
Sbjct:   28 LVFLIFYEVSGGPFGVEDSVQAAGPFLALLGF-LLFPLIWSVPEALITAEMGTMFPENGGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSSIPAVAGGGAARSISVLALTAALTYLNYRGLTIVGGVAVFLGVFSILPFAVMGLLSIPRLEPSRWLAPPPDLRSGVDWNLYLNTLFWNLNYWDSISTLAGEVQEPKRTLPRALFFA 244          
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: M0ZV34_SOLTU (Neutral amino acid transport protein n=5 Tax=Solanum TaxID=4107 RepID=M0ZV34_SOLTU)

HSP 1 Score: 148 bits (374), Expect = 3.300e-38
Identity = 85/243 (34.98%), Postives = 139/243 (57.20%), Query Frame = 1
Query:   61 EDEENGYTPSVPAASAKHS-LSFGALVFLIYYNI-GVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFLGLS------GALRWVFVYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVD---WAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAILYA 756
            E E+N    S+    A  S +SF  L FLI+Y + G PFG E+ V+AAGPF+  +G+ +I P++W +P   +TAEL+T F ++ G + WV+++FG  WGF      + +  +DNALYP++  D++  S      G  R + + + + ALT+  YRG  +VA    ++  FT+LP V+M  + L ++    W  V      ++V W L++  +FW   YW  V+++  +V+D  K  P+A+ YA
Sbjct:    2 EAEDNVEYSSLHRGGANFSKVSFVPLTFLIFYGVSGGPFGVEDTVRAAGPFLALVGY-LIFPIIWSIPESLITAELSTMFPENGGYVVWVSKSFGPYWGFQLGWVKWMSGVVDNALYPVLFLDYIKSSVPALANGLPRTIAILALVIALTYLNYRGLTIVAWVATVLAIFTLLPFVIMGFIALPKLKPSRWFVVDL----ENVQWGLYLNTLFWNLNYWDSVSTMSGEVEDPGKTIPKALFYA 239          
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: G7K6T4_MEDTR (Neutral amino acid transporter n=6 Tax=Trifolieae TaxID=163742 RepID=G7K6T4_MEDTR)

HSP 1 Score: 147 bits (370), Expect = 1.840e-37
Identity = 84/234 (35.90%), Postives = 125/234 (53.42%), Query Frame = 1
Query:   76 GYTPSVPAASAKHSLSFGALVFLIYYNI-GVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFL-----GLSGALRWVFV-YSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVDWAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAILYA 756
            G  PS P A+    LS   LVFLI+Y + G PFG E+ VKAAGP +  LGFFV  P +W +P   +TAE+ T F ++ G + WV+ A G  WGF      + +  +DNALYP++  D+L      + G L  VF  +     LT+  YRG  +V      +  F++LP V M  L +  +           +DVDW L++  +FW   YW  ++++  +V++  KN P+ + YA
Sbjct:   33 GEVPS-PRANHMRKLSVLPLVFLIFYEVSGGPFGVEDTVKAAGPLLALLGFFVF-PFIWSVPEALITAEMGTMFPENSGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAVPAVGGGLPRVFATWGLTIVLTYLNYRGLTIVGLVAVCLGIFSLLPFVFMGFLSIPDMKPERWFVETNLNDVDWNLYLNTLFWNLNYWDSISTLAGEVENPKKNLPKGLFYA 264          
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: A0A835YRE6_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE6_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.120e-37
Identity = 89/229 (38.86%), Postives = 125/229 (54.59%), Query Frame = 1
Query:  109 KHSLSFGALVFLIYYNI-GVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFLG---------LSGALRWVFVYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGL----FRVDWAAVATPPAA--DDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAI 747
            K SLSF ALV LI+Y + G PFG EEAV A GP +  LG  V+LPL W +P   VTAEL+T F +  G +AWV+ AFG  WGF++  WS+ +   DN+LY ++I D++          + G  R  F+ ++ A LT    RG   V     LV  F++LP ++M   GL    +  +W  +   PA     V+W   + +MFW   YW   AS   +V +  + FPRA+
Sbjct:   90 KKSLSFPALVVLIFYGVSGGPFGMEEAVAAGGPLLTLLGL-VLLPLAWSIPEALVTAELSTAFPEASGFVAWVSAAFGPYWGFMEGYWSWLSGVADNSLYAVLILDYVLRLLDPDSPLMEGLPRAAFLLATCALLTMLNLRGLQFVGRTAILVCVFSLLPFIIMSCWGLKGYQYPSNWLDL---PAGGLQAVEWGTLLNVMFWNLNYWDSAASFAGEVDNPGRAFPRAM 314          
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Match: A0A251L1Y9_MANES (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A251L1Y9_MANES)

HSP 1 Score: 145 bits (367), Expect = 3.590e-37
Identity = 81/233 (34.76%), Postives = 128/233 (54.94%), Query Frame = 1
Query:   88 SVPAASAKHSLSFGALVFLIYYNI-GVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQDHRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFLGL------SGALRWVFVYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVD---WAAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAILYA 756
            S P       +S   L+FLI+Y + G PFG E++VKAAGP +  LGFF + P +W +P   +TAE++T F ++ G + WV+ A G  WGF      + +  +DNALYP++  D+L        SG  R V V +   ALT+  YRG  +V     L+  F++LP V M  + + ++    W  +      D+VDW L++  +FW   YW  ++++  +V++  K  P+A+ YA
Sbjct:   16 SSPRLDEIQKVSIVPLIFLIFYEVSGGPFGVEDSVKAAGPLLALLGFF-LFPFIWSIPEALITAEMSTMFPENGGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAIPALESGFPRIVAVLALTIALTYMNYRGLTIVGRVAILLGVFSLLPFVFMGLVAIPKLKPSRWLVMDL----DNVDWGLYLNTLFWNLNYWDSISTLAGEVENPSKTLPKALFYA 243          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8037.19366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIJ9_9PHAE2.080e-12897.91PHS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A0D2M1A6_9CHLO3.350e-4439.51Arginine/agmatine antiporter n=1 Tax=Monoraphidium... [more]
A0A6I9QCD6_ELAGV3.110e-3934.62polyamine transporter RMV1 n=1 Tax=Elaeis guineens... [more]
A0A8J9WRS2_9CHLO1.270e-3837.56Polyamine transporter PUT1 n=1 Tax=Coccomyxa sp. O... [more]
A0A175YI16_DAUCS2.040e-3835.56Uncharacterized protein n=2 Tax=Daucus carota subs... [more]
A0A7I8KCM6_SPIIN3.130e-3836.24Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
M0ZV34_SOLTU3.300e-3834.98Neutral amino acid transport protein n=5 Tax=Solan... [more]
G7K6T4_MEDTR1.840e-3735.90Neutral amino acid transporter n=6 Tax=Trifolieae ... [more]
A0A835YRE6_9STRA2.120e-3738.86Amino acid permease-domain-containing protein n=1 ... [more]
A0A251L1Y9_MANES3.590e-3734.76Uncharacterized protein n=1 Tax=Manihot esculenta ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8037contigEcto-sp13_S_contig8037:4253..7114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score520.0
Seed ortholog evalue6.3e-145
Seed eggNOG ortholog2880.D8LTH5
Preferred nameAAT11
Model size780
KEGG koko:K16262
KEGG TC2.A.3.12
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.L-alpha-amino acid transmembrane transport
EggNOG OGsCOG0531@1,KOG1287@2759
Cds size780
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464076.8444028-CDS-Ecto-sp13_S_contig8037:4252..44351681464076.8444028-CDS-Ecto-sp13_S_contig8037:4252..4435Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8037 4253..4435 +
1681464076.8575196-CDS-Ecto-sp13_S_contig8037:5045..51591681464076.8575196-CDS-Ecto-sp13_S_contig8037:5045..5159Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8037 5046..5159 +
1681464076.872599-CDS-Ecto-sp13_S_contig8037:5585..57981681464076.872599-CDS-Ecto-sp13_S_contig8037:5585..5798Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8037 5586..5798 +
1681464076.8888826-CDS-Ecto-sp13_S_contig8037:6108..62881681464076.8888826-CDS-Ecto-sp13_S_contig8037:6108..6288Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8037 6109..6288 +
1681464076.8999183-CDS-Ecto-sp13_S_contig8037:7024..71141681464076.8999183-CDS-Ecto-sp13_S_contig8037:7024..7114Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8037 7025..7114 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8037.19366.1prot_Ecto-sp13_S_contig8037.19366.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8037 4253..7114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8037.19366.1

>prot_Ecto-sp13_S_contig8037.19366.1 ID=prot_Ecto-sp13_S_contig8037.19366.1|Name=mRNA_Ecto-sp13_S_contig8037.19366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp
MENVLSVNGGSLKAPLIGWDEDEENGYTPSVPAASAKHSLSFGALVFLIY
YNIGVPFGDEEAVKAAGPFMVTLGFFVILPLMWQLPICFVTAELTTTFQD
HRGSIAWVTEAFGSEWGFIDAVWSFATSFLDNALYPLIIADFLGLSGALR
WVFVYSSIAALTWAVYRGSAVVASAEELVFAFTMLPLVLMVGLGLFRVDW
AAVATPPAADDVDWRLFIQIMFWTSTYWQKVASVGPDVKDCPKNFPRAIL
YAAGMQTLIN
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mRNA from alignment at Ecto-sp13_S_contig8037:4253..7114+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8037.19366.1 ID=mRNA_Ecto-sp13_S_contig8037.19366.1|Name=mRNA_Ecto-sp13_S_contig8037.19366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2862bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8037:4253..7114+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGAATGTGCTGTCTGTTAACGGGGGCAGCTTGAAGGCCCCGCTTAT CGGGTGGGATGAGGACGAGGAGAATGGTTACACGCCGAGCGTGCCAGCAG CTTCCGCGAAGCACTCGCTGTCGTTTGGTGCTCTGGTCTTCTTAATTTAC TACAACATCGGAGTACCCTTCGGAGACGAGGAGGTGAGAGTAGAGTAGGC CAGCGCAGGGATGGATGTCCTGACCTCCGTCATGGCTTTGGTAATGCTCA GGTAGTAAAAGCGCAATCGAGCAAAGAAAAATCGGATAGATGTTTTCCCC ACTACAGGGTGCAGGTACTAGCACAGGAGCAGATAATGCGGCAGAGGATA TCCATACAGGTTTCGGTAATATAGTAAGAGAAGGAGCGCATACGGAACAA ATGCCAACCCAATCAAGCATAGAGAAGGCGGAAAGAGACACTACCCCGTA GCAGGAAATGGTGCGAAACATCACAGGAGCATAGGAATGCTGTAGCTTGG TGGTGTTGAGTCTTCTCGTTGCCCTTCGAATCCGGAGAATCAACCCCAAA CGTACGATCAGCGCAAAGAAGATACGTTGGGTTGATTTTTGCAACAGCAG GGTAGGAGGCGTACGCTACAGCTACGCCACCACAGCAGTCGCCATCTTGC TATTCTTCCTCGAGAAGTACGTGAAAGGTTGCTTGGATGCAAGAGCTTGA TATATTTACGATCCCCAAATACGTCACATTCCACCAACCATTGTAAATTC CCGGATGTTATCCCCTCCCCCGTCATCATGACGTTTCTGACAGGCGGTGA AAGCGGCGGGACCGTTCATGGTGACCCTTGGGTTCTTCGTGATCCTTCCC CTGATGTGGCAGCTCCCGATCTGCTTCGTTACCGCCGAGCTCACCACCAC TTTTCAGGTGCGCAACTGCGCCTCTCCGGGCGTGGTGGGCTCACGCGACT GCCGTAGGCGGAGTGCAGATCCCAGCCTCCGCGCAATGGAAAAGATCGTA GATGTGCCAGGTCGTGAACTTGTCGGCTGTCTACGGACGCGCGCACGCTG GGAATCAAGCACGTCGTTTGAACCTGTCGTTCGTAGGGTATCATCAGCGC ATCTTAGGTGCCGAGGTCTGAGAAAAGGAGGGCTCTTCTTGACACGAGGA TGCCACTGTAATCGGCTCGGCTAACGTTGAAAAATTGGTGCGAAGTCTCG CTGCTGCTGTGCGTGCATGTAATACAAAGTAGAACTGACCTTTTGAGATC TTGTATACGTATCTCATACAGCGGCAATTTATGTCTTGGCTGCTTCTGAC AACAACTGCTGTGTGCGATGTGGTTTTTGGCAGGACCACCGTGGGAGCAT AGCTTGGGTAACGGAGGCGTTCGGGTCGGAGTGGGGTTTCATCGACGCCG TGTGGTCGTTCGCGACGTCCTTCCTGGACAACGCCCTGTACCCCCTCATC ATCGCGGACTTCTTGGGCCTTTCCGGCGCACTGCGCTGGGTGTTCGTCTA CAGCTCCATCGCGGCACTCACCTGGGCCGTGTACCGAGGATCGGCGGTAA GGCAGGAAACGTATTTTATAATGACATATGGATCCGGAATACGGAAATGT GGGCATTATCATATATGGCGGTTTGAAAGATACAGCTGCTGAGACGGTGC AAACATGAGTCATCGCCTAGTTTCCATTGCGCGTCGGGTAGCGCATTGAT TTGCCAGCGTGCCACCATGTAACTGCACGTTCCTCCCCCCGTCAAACACT GGCTCCAAGGACCCTCTGCATTCACACGCTTGCAGTTTTAACCTGATGGT ATTGAACGCCGCCGTTTGTTTTTGCCGATCCCTCGTCCCCCCACCCGGTC GGCTAGGTGGTAGCCAGTGCGGAGGAGTTGGTCTTCGCGTTCACGATGCT TCCCCTCGTGCTTATGGTGGGGCTTGGCCTTTTCCGCGTGGACTGGGCGG CTGTGGCCACTCCCCCAGCGGCCGACGACGTTGACTGGAGGCTCTTCATC CAGATCATGTTCTGGACGAGCACGTACTGGCAGAAAGTGAGAGGGAAGGG GTGAGGAGGGGTGGTTTTGTGTTACGACGGGTCGGAAGGAGCAGGGGAAT TTCACGCTCAAGCGCCGTGCCCGAAAGTAACCGTCGAATGAGAGAGAGAA GAGTAGGGTGCACCCGCGCGGTGCTTGAGAAGCGAGATGGGCGTTTCACC TATTTTGCTCACTTTTCCGTGCGTCTTGAAGAAAAGTACTGCGTTTGGTC TCCCGGACCACCGCCGTCGGTGAAGCGCATTTCCAGCCGGCCGGCGAAGC GTACCTGCGAGGAAAACCCTCATCATCTTCAGACGTCGGGCAGCATCGCC TGCCTTGCTTGGGGCATCCGCGAAGCGCGCTTGAGAGTGTTGAGTGATTC AAAAAGAATCGGGGCGTACTTGCCGGAGATGTTCGCCGGTTGTTTTTTGG AGCTTTCTTTCGGACCTTCTTTGTCGAACGCAGCGTTCTGCGCCACGGAA TAGGCAGCGGCAGCACCAACCTCTCGGCGGTTCAAACTTCGGGCTTCTTG CCCTTCTTTGGCTGTGTTGCTGACCCCCCATTGTTCCTGAATCTCGATAA GGGCATCAGCTCCTATTTTACTACCCTATTTTCTGCGAGCTTGGCGTGAC GTGAGACAGACTCGAAATGCTCCCGCCGAAGCCAGTCGAAAAGTATTGGT TTCAATCGTCCTAGCCATGCCTTTTGACTGCTGCTTCTGCTGCTGCTGGG GTGTCGATGTGCGGCGGCGCAGGTGGCGTCGGTTGGCCCTGACGTGAAGG ACTGCCCCAAGAACTTTCCCCGGGCCATTCTTTACGCGGCCGGCATGCAG ACCCTGATCAAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8037:4253..7114+

>mRNA_Ecto-sp13_S_contig8037.19366.1 ID=mRNA_Ecto-sp13_S_contig8037.19366.1|Name=mRNA_Ecto-sp13_S_contig8037.19366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8037:4253..7114+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGAATGTGCTGTCTGTTAACGGGGGCAGCTTGAAGGCCCCGCTTAT
CGGGTGGGATGAGGACGAGGAGAATGGTTACACGCCGAGCGTGCCAGCAG
CTTCCGCGAAGCACTCGCTGTCGTTTGGTGCTCTGGTCTTCTTAATTTAC
TACAACATCGGAGTACCCTTCGGAGACGAGGAGGCGGTGAAAGCGGCGGG
ACCGTTCATGGTGACCCTTGGGTTCTTCGTGATCCTTCCCCTGATGTGGC
AGCTCCCGATCTGCTTCGTTACCGCCGAGCTCACCACCACTTTTCAGGAC
CACCGTGGGAGCATAGCTTGGGTAACGGAGGCGTTCGGGTCGGAGTGGGG
TTTCATCGACGCCGTGTGGTCGTTCGCGACGTCCTTCCTGGACAACGCCC
TGTACCCCCTCATCATCGCGGACTTCTTGGGCCTTTCCGGCGCACTGCGC
TGGGTGTTCGTCTACAGCTCCATCGCGGCACTCACCTGGGCCGTGTACCG
AGGATCGGCGGTGGTAGCCAGTGCGGAGGAGTTGGTCTTCGCGTTCACGA
TGCTTCCCCTCGTGCTTATGGTGGGGCTTGGCCTTTTCCGCGTGGACTGG
GCGGCTGTGGCCACTCCCCCAGCGGCCGACGACGTTGACTGGAGGCTCTT
CATCCAGATCATGTTCTGGACGAGCACGTACTGGCAGAAAGTGGCGTCGG
TTGGCCCTGACGTGAAGGACTGCCCCAAGAACTTTCCCCGGGCCATTCTT
TACGCGGCCGGCATGCAGACCCTGATCAAC
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