prot_Ecto-sp13_S_contig8035.19362.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8035.19362.1
Unique Nameprot_Ecto-sp13_S_contig8035.19362.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length140
Homology
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: A0A6H5L4N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N3_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 9.400e-34
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:   22 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTLSK 81
            EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTLSK
Sbjct:  395 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTLSK 454          
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: D7FZH6_ECTSI (WD repeat domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH6_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 9.830e-34
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:   22 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTLSK 81
            EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTLSK
Sbjct: 3384 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTLSK 3443          
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: A0A427Y3J7_9TREE (Uncharacterized protein n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427Y3J7_9TREE)

HSP 1 Score: 73.9 bits (180), Expect = 1.280e-12
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 0
Query:   22 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKST 78
            EV+C+CR+++  G M+EC  C DWFH  CVGL E + +R  KY CP C +  G+KST
Sbjct:  110 EVWCICRSSEADGPMIECGECNDWFHFSCVGLEEDEAERIHKYICPNCEETTGEKST 166          
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: A0A834REV4_SARSC (CXXC-type zinc finger protein 1 n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834REV4_SARSC)

HSP 1 Score: 65.5 bits (158), Expect = 1.060e-9
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0
Query:   24 YCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKN 72
            YCVCR + VTG M++CDFC +WFH  C+ +T+Q   +  ++ CPLCT +
Sbjct:   26 YCVCRKSHVTGFMIQCDFCFEWFHGPCIKVTKQSAAKIEQFLCPLCTSD 74          
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: A0A177UBE9_9BASI (Transcription factor BYE1 n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UBE9_9BASI)

HSP 1 Score: 65.5 bits (158), Expect = 1.160e-9
Identity = 27/59 (45.76%), Postives = 37/59 (62.71%), Query Frame = 0
Query:   23 VYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTLSK 81
            +YCVC+  D    M+EC  C+DWFH+RCVGL+++  DR   Y CP C++      T SK
Sbjct:  212 LYCVCKKKDDGSPMVECALCEDWFHLRCVGLSKRAVDRLESYTCPPCSEKIALAKTNSK 270          
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: UPI0003F09002 (nucleosome-remodeling factor subunit BPTF-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F09002)

HSP 1 Score: 63.2 bits (152), Expect = 1.770e-9
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:   22 EVYCVCRTA-DVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKS 77
            E+YC+CR   D +   + CD CQDWFH RCVG+++ + D   KY CP C  +K +KS
Sbjct:   29 ELYCICRQPYDESQFYIGCDRCQDWFHGRCVGISQTEADNIEKYLCPNCQSSKVQKS 85          
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: A0A177VBA2_9BASI (Transcription factor BYE1 n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VBA2_9BASI)

HSP 1 Score: 63.9 bits (154), Expect = 4.010e-9
Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   23 VYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTK 71
            +YC+C+  D    M+EC  C+DWFH+RCVGL+++  DR   Y CP C++
Sbjct:  207 LYCICKKKDDGSPMVECAACEDWFHLRCVGLSKRAVDRLESYTCPACSE 255          
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: A0A4Q9N8L8_9APHY (PHD-type domain-containing protein n=1 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9N8L8_9APHY)

HSP 1 Score: 60.8 bits (146), Expect = 6.570e-9
Identity = 22/59 (37.29%), Postives = 35/59 (59.32%), Query Frame = 0
Query:   22 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTKNKGKKSTLS 80
            ++YC+C+  D    M+ C  C+DW+H RCV L+E D +    Y CP C +  G ++ +S
Sbjct:   50 KIYCLCKKPDDGSPMIHCSSCKDWYHFRCVELSETDAEEIQHYVCPSCHEKTGARTIIS 108          
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: H2ZQ20_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZQ20_CIOSA)

HSP 1 Score: 61.2 bits (147), Expect = 1.050e-8
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   22 EVYCVCRTA-DVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLC 69
            E+YC+CRT  D T   + CD CQDW+H RCVG+TE++      Y CP C
Sbjct:   37 ELYCLCRTPYDDTQFYIGCDACQDWYHGRCVGITEEESSNIDSYTCPRC 85          
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Match: A0A8J4YB64_CHIOP (CXXC-type zinc finger protein 1 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4YB64_CHIOP)

HSP 1 Score: 62.0 bits (149), Expect = 1.720e-8
Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   22 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLC 69
            +VYCVCRTADVT  M+ CD C++W+H  C+ +TE + ++  K+ C  C
Sbjct:   11 QVYCVCRTADVTRFMIGCDKCEEWYHGDCINVTESEANKIRKFFCQKC 58          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8035.19362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N3_9PHAE9.400e-34100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZH6_ECTSI9.830e-34100.00WD repeat domain-containing protein, putative n=1 ... [more]
A0A427Y3J7_9TREE1.280e-1250.88Uncharacterized protein n=1 Tax=Saitozyma podzolic... [more]
A0A834REV4_SARSC1.060e-948.98CXXC-type zinc finger protein 1 n=1 Tax=Sarcoptes ... [more]
A0A177UBE9_9BASI1.160e-945.76Transcription factor BYE1 n=2 Tax=Tilletia TaxID=1... [more]
UPI0003F090021.770e-947.37nucleosome-remodeling factor subunit BPTF-like n=1... [more]
A0A177VBA2_9BASI4.010e-946.94Transcription factor BYE1 n=2 Tax=Tilletia TaxID=1... [more]
A0A4Q9N8L8_9APHY6.570e-937.29PHD-type domain-containing protein n=1 Tax=Dichomi... [more]
H2ZQ20_CIOSA1.050e-851.02Uncharacterized protein n=1 Tax=Ciona savignyi Tax... [more]
A0A8J4YB64_CHIOP1.720e-847.92CXXC-type zinc finger protein 1 n=1 Tax=Chionoecet... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 24..70
e-value: 7.5E-9
score: 45.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 17..88
e-value: 4.1E-20
score: 72.9
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 24..71
e-value: 8.4E-9
score: 35.2
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 22..72
score: 9.187
IPR037869Spp1/CFP1PANTHERPTHR46174FAMILY NOT NAMEDcoord: 22..88
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 25..69
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 20..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8035contigEcto-sp13_S_contig8035:2867..3286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8035.19362.1mRNA_Ecto-sp13_S_contig8035.19362.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8035 2867..3286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8035.19362.1 ID=prot_Ecto-sp13_S_contig8035.19362.1|Name=mRNA_Ecto-sp13_S_contig8035.19362.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp
APVAGGGAAAAAGGGGGGGGGEVYCVCRTADVTGTMLECDFCQDWFHVRC
VGLTEQDCDRFSKYACPLCTKNKGKKSTLSKKKRKVPPNNDPAAAVPPSS
LRAAGSGGDGAGARAAAGGEHGYAALPAQKNKPRAPGGDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR037869Spp1/CFP1
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD