prot_Ecto-sp13_S_contig80320.19359.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig80320.19359.1
Unique Name	prot_Ecto-sp13_S_contig80320.19359.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	180

Homology

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BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE)

HSP 1 Score: 333 bits (855), Expect = 1.470e-112
Identity = 161/180 (89.44%), Postives = 168/180 (93.33%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            YACKITDDYTKMKEVYL R+KSDTTEAVHTYNMCVAAAGGY+IETIRC  GGENTGS+FR+Y  NSAIKLEYAA NTPQQIG  ERDGQTLAGVTRCLLKD D PPSMW E+MLTAA LLNRSPHSALGGATPY+K+HNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD
Sbjct:   80 YACKITDDYTKMKEVYLPRKKSDTTEAVHTYNMCVAAAGGYQIETIRCDKGGENTGSDFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 259

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BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 1.790e-111
Identity = 166/180 (92.22%), Postives = 170/180 (94.44%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            YACKITDDYTKMKEVYLLR+KSDTTEAVHTYNMCVAAAGGYRIETIRC  GGENTGSEFR+Y  NSAIKLEYAA NTPQQIGA ERDGQTLAGVTRCLLKD D PPSMW ELMLTAA LLNRSPHSALGGATPY+K+HNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD
Sbjct:  502 YACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 681

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BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 3.910e-110
Identity = 163/180 (90.56%), Postives = 168/180 (93.33%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            YACK+TDDYTKMKEVYLLR+KSDTTEAVHTYNMCVAAAGGYRIETIRC  GGENTGSEFR+Y  NSAIKLEYAA NTPQQIG  ERDGQTLAGVTRCLLKD D PPSMW ELMLTAA LLNRSPHSALGGATPY+K+ NKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD
Sbjct:  450 YACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 629

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BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 6.610e-110
Identity = 165/180 (91.67%), Postives = 169/180 (93.89%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            YACKITDDYTKMKEVYLLR+KSDTTEAVHTYNMCVAAAGGYRIETIRC  GGENTGSEFR+Y  NSAIKLEYAA NTPQQIG  ERDGQTLAGVTRCLLKD D PPSMW ELMLTAA LLNRSPHSALGGATPY+K+HNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD
Sbjct:  126 YACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 305

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BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5KLG0_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG0_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 1.480e-109
Identity = 163/180 (90.56%), Postives = 167/180 (92.78%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            YACKITDDYTKMKEVYLLR+KSDTTEAVHTYNMCVAAAGGYRIETIRC  GGENTGSEFR+Y  NSA KLEYAA NT QQIG  ERDGQTLAGVTRCLLKD D PPSMW ELMLTAA LLNRSPHSALGGATPY+K+HNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD
Sbjct:   17 YACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSATKLEYAATNTTQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 196

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BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 2.020e-109
Identity = 162/180 (90.00%), Postives = 167/180 (92.78%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            YACKITDDYTKMKEVYLLR+KSDTTEAVHTYNMCVAAAGGYRIETIRC  GGENTGSEFR+   NSAIKLEYAA NTPQQ+G  ERDGQTLAGVTRCLLKD D PPSMW ELMLTAA LLNRSPHSALGGATPY+K+HNKSPDLSGLRVIGARAFVHHER RKKLDDRAFEGKLCGFGLD
Sbjct:  126 YACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERCRKKLDDRAFEGKLCGFGLD 305

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BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 2.640e-109
Identity = 165/180 (91.67%), Postives = 169/180 (93.89%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            YACKITDDYTKMKEVYLLR+KSDTTEAVHTYNMCVAAAGGYRIETIRC  GGENTGSEFR+Y  NSAIKLEYAA NTPQQIG  ERDGQTLAGVTRCLLKD D PPSMW ELMLTAA LLNRSPHSALGGATPY+K+HNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD
Sbjct:  126 YACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 305

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BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5KHY1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY1_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.310e-107
Identity = 155/180 (86.11%), Postives = 161/180 (89.44%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            Y CKITDDYTKMKEVYLLR+KSDTTEAVHTYNMCVAAAGGY IETIRC  GGE TGSEFR+Y  NSAIKLEYAA NTPQQ    ERDGQ+LAGVTRCLLKD   PPSMW ELMLTAA LLNRSPHSALGGATPY+K+H KSPDLSGLRVIGAR FVHH+RYRKKLDDRAFEGKLCGFGLD
Sbjct:   74 YECKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYLIETIRCDKGGEKTGSEFRDYCKNSAIKLEYAATNTPQQSAVLERDGQSLAGVTRCLLKDGVFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHKKSPDLSGLRVIGARTFVHHDRYRKKLDDRAFEGKLCGFGLD 253

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BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 2.280e-107
Identity = 165/180 (91.67%), Postives = 169/180 (93.89%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            YACKITDDYTKMKEVYLLR+KSDTTEAVHTYNMCVAAAGGYRIETIRC  GGENTGSEFR+Y  NSAIKLEYAA NTPQQIG  ERDGQTLAGVTRCLLKD D PPSMW ELMLTAA LLNRSPHSALGGATPY+K+HNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD
Sbjct:  126 YACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 305

[Close]

BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 6.580e-107
Identity = 165/180 (91.67%), Postives = 169/180 (93.89%), Query Frame = 0

Query:    1 YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGIGGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLKDEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 180
            YACKITDDYTKMKEVYLLR+KSDTTEAVHTYNMCVAAAGGYRIETIRC  GGENTGSEFR+Y  NSAIKLEYAA NTPQQIG  ERDGQTLAGVTRCLLKD D PPSMW ELMLTAA LLNRSPHSALGGATPY+K+HNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD
Sbjct:  126 YACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLD 305

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig80320.19359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KF63_9PHAE	1.470e-112	89.44	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KT84_9PHAE	1.790e-111	92.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVF6_9PHAE	3.910e-110	90.56	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K500_9PHAE	6.610e-110	91.67	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KLG0_9PHAE	1.480e-109	90.56	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KCM0_9PHAE	2.020e-109	90.00	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5K1R7_9PHAE	2.640e-109	91.67	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KHY1_9PHAE	1.310e-107	86.11	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JJR8_9PHAE	2.280e-107	91.67	Integrase catalytic domain-containing protein n=11...	[more]
A0A6H5KCT3_9PHAE	6.580e-107	91.67	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..166 e-value: 1.8E-15 score: 58.7
None	No IPR available	PANTHER	PTHR11439:SF265		coord: 51..170
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 51..170
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..141 score: 11.457
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..148

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig80320	contig	Ecto-sp13_S_contig80320:6..545 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig80320.19359.1	mRNA_Ecto-sp13_S_contig80320.19359.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig80320 6..545 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig80320.19359.1 ID=prot_Ecto-sp13_S_contig80320.19359.1|Name=mRNA_Ecto-sp13_S_contig80320.19359.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp
YACKITDDYTKMKEVYLLREKSDTTEAVHTYNMCVAAAGGYRIETIRCGI
GGENTGSEFRNYGNNSAIKLEYAAINTPQQIGAPERDGQTLAGVTRCLLK
DEDCPPSMWVELMLTAANLLNRSPHSALGGATPYAKMHNKSPDLSGLRVI
GARAFVHHERYRKKLDDRAFEGKLCGFGLD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf