prot_Ecto-sp13_S_contig8030.19358.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8030.19358.1
Unique Name	prot_Ecto-sp13_S_contig8030.19358.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	665

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8030.19358.1 vs. uniprot
Match: D8LMN8_ECTSI (WD repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN8_ECTSI)

HSP 1 Score: 503 bits (1294), Expect = 6.020e-158
Identity = 560/656 (85.37%), Postives = 566/656 (86.28%), Query Frame = 0

Query:    1 MASTLEAENLHHVVMAGDQISSGSHSEVAGSGSSSGGRAARSNRELEDRGTAATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSNDGPASYEGWSAAAGLANGVGSGGVRPSSAPRTMAHDTNGNPRDSSSGISRRRSRGKSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQKSITRTSSNHRLRLSIEGESXXXXXXXGLDASSPAGEVAELEDVAAGHQAAGELAALERAVVAASKITXXXXXXXXXXXXXXXDFTARMMGTGPASRSRRNSGGNSIGGSWEQQEVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDALSHGSPAAAMTSPERRRHTRDLAPAIHASPISRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRELQPPHSINMTEGDEGPPSRPRKNSGGGGPQFRGDGGGGRPSGERRERGSRXXXXXXXXXXXXXXXNGLPRGRAAGRNGRRGRRSVSMPQSGYRGPGAFGLAPVVEGDAEEXXXXXXXXXXXXXXXXXXXDQDMVFKVVNKDAEELVSDSRDPTEEEDVPFDVTPQNYRAGEAWHPERQ 656
            MASTLEAENLHHVVMAGD ISSGSH+E+AGS SSSGGRA RS+RELEDRGTA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      DSNDGPASYEGWSAAA LANGVGSGGV PSSAPRTMA DT GNPRDSS GISRRRS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      XXXXXXX LD  SP GEVAELE VAAGHQ AGELAALERAVVAASKIT XXXXXXXXXXX   DFTARMMGTGPASRSRRNSGGNSIGGSWEQQEVAE              XXXXXXXXXXXXXXXXXXXXXXXX +ALSHGSPAAAMTSPERRR T DLAPAIHASPISRAAXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXGRRELQPPHSINMTEGDEGPPSRPRKNSGGGGPQFRGDGGGGRPSGERRERGSRXXXXXXXXXXXXXXXNGLPRGRAAGRNGRRGRRSVSMPQSGYRGPGAFG APVVEGDAEEXXXXXXXXXXXXXXX    DQDMVFKVVNKDAEE VSDSR+P +EEDVPFDVTPQ YRAGEAWHPERQ
Sbjct:    1 MASTLEAENLHHVVMAGDHISSGSHAELAGS-SSSGGRATRSSRELEDRGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------DSNDGPASYEGWSAAADLANGVGSGGVSPSSAPRTMARDTTGNPRDSS-GISRRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LDVLSPTGEVAELEAVAAGHQTAGELAALERAVVAASKITPXXXXXXXXXXX---DFTARMMGTGPASRSRRNSGGNSIGGSWEQQEVAEVGQAGPPGGILPAPXXXXXXXXXXXXXXXXXXXXXXXXXEALSHGSPAAAMTSPERRRRTGDLAPAIHASPISRAAXXXXXXXXXXXXXXXXXXVSDQPRSSRAXXXXXXXXXXXXXXXXXGRRELQPPHSINMTEGDEGPPSRPRKNSGGGGPQFRGDGGGGRPSGERRERGSRXXXXXXXXXXXXXXXNGLPRGRAAGRNGRRGRRSVSMPQSGYRGPGAFGHAPVVEGDAEEXXXXXXXXXXXXXXXD---DQDMVFKVVNKDAEEPVSDSRNPADEEDVPFDVTPQTYRAGEAWHPERQ 641

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BLAST of mRNA_Ecto-sp13_S_contig8030.19358.1 vs. uniprot
Match: A0A6H5KWS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS7_9PHAE)

HSP 1 Score: 487 bits (1253), Expect = 3.670e-149
Identity = 566/671 (84.35%), Postives = 579/671 (86.29%), Query Frame = 0

Query:    1 MASTLEAENLHHVVMAGDQISSGSHSEVAGSGSSSGGRAARSNRELEDRGTAATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSNDGPASYEGWSAAAGLANGVGSGGVRPSSAPRTMAHDTNGNPRDSSSGISRRRSRGKSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQKSITRTSSNHRLRLSIEGESXXXXXXXGLDASSP--AGEVAELEDVAAGHQAAGELAALERAVVAASKITXXXXXXXXXXXXXXX--DFTARMMGTGPASRSRRNSGGNSIGGSWEQQEVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDALSHGSPAAAMTSPERRRHTRDLAPAIHASPISRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GRRELQPPHSINMTEGDEGPPSRPRKNSGGGG-PQFRGDGGGGRPSGERRERGSRXXXXXXXXXXXXXXXNGLPRGRAAGRNGRRGRRSVSMPQSGYRGPGAFGLAPVVEGDAEEXXXXXXXXXXXXXXXXXXXDQDMVFKVVNKDAEELVSDSRDPTEEEDVPFDVTPQNYRAGEAWHPERQVCVRVWLS 664
            MASTLEAENLHHVVMAGD ISSGSH+E+    SSSGGRA RS+RELEDRGTA  +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      DSNDGPASYEGWSAAAGLANGVGSG +RPSSAPRTMAHDT GNPRDS+ GISRRRSRGK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      XXXX    LDASSP  AG+V ELEDV AGHQAAGELAALERAVVAASKITXXXXXXXXXXXXXXX  DFTARMMGTGPASRSRRNSGGNSIGGSWEQQEVAE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ++ LSHGSP AAMTSPERRR TRD APA+HASPISRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GRRELQPPHSINMTEGDEGPPSRPRKNSGGGG PQFRGDG   RPSGERRERG  XXXXXXXXXXXXXXXNGLPRGRA GRNGRRGRRSVSMPQSG+RGPGAFGLAPVVEGDAEEXXXXXXXXXXX        DQDMVFKVVNKDAEE VSDSR+P EE+DVPFDVTPQNYRAGEAWHPERQ       S
Sbjct:    1 MASTLEAENLHHVVMAGDHISSGSHTEL--DRSSSGGRATRSSRELEDRGTAVAIPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------DSNDGPASYEGWSAAAGLANGVGSGSMRPSSAPRTMAHDTTGNPRDSN-GISRRRSRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----LDASSPSPAGKVTELEDVVAGHQAAGELAALERAVVAASKITXXXXXXXXXXXXXXXXXDFTARMMGTGPASRSRRNSGGNSIGGSWEQQEVAETGQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAVEVLSHGSPTAAMTSPERRRRTRDFAPAMHASPISRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRELQPPHSINMTEGDEGPPSRPRKNSGGGGGPQFRGDGXXXRPSGERRERGXXXXXXXXXXXXXXXXXNGLPRGRAVGRNGRRGRRSVSMPQSGHRGPGAFGLAPVVEGDAEEXXXXXXXXXXXED------DQDMVFKVVNKDAEEPVSDSRNPAEEKDVPFDVTPQNYRAGEAWHPERQNAALASTS 652

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8030.19358.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8030.19358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LMN8_ECTSI	6.020e-158	85.37	WD repeat protein (Partial) (Fragment) n=1 Tax=Ect...	[more]
A0A6H5KWS7_9PHAE	3.670e-149	84.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 579..608

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8030	contig	Ecto-sp13_S_contig8030:770..4888 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8030.19358.1	mRNA_Ecto-sp13_S_contig8030.19358.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8030 770..4888 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8030.19358.1 ID=prot_Ecto-sp13_S_contig8030.19358.1|Name=mRNA_Ecto-sp13_S_contig8030.19358.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=665bp
MASTLEAENLHHVVMAGDQISSGSHSEVAGSGSSSGGRAARSNRELEDRG
TAATVPPQQHAGGSAGGRAVSASRAAAEGVVVGRGGPTTAVEKDSSGGVM
QQQQRPQQRRASAGSSSSSRNPRRLSSSGGGGGGGGGGGDSNDGPASYEG
WSAAAGLANGVGSGGVRPSSAPRTMAHDTNGNPRDSSSGISRRRSRGKST
GGSGGDGSSSGGGGGGGGGGRSTSPTTTPATTTPQKSITRTSSNHRLRLS
IEGESSGGGRGGGLDASSPAGEVAELEDVAAGHQAAGELAALERAVVAAS
KITPPPADGGGGGGGGGGDFTARMMGTGPASRSRRNSGGNSIGGSWEQQE
VAEAGQAGPPGGLPPAPPKTPSGSSSAGSGVSVSSTGATQAIDALSHGSP
AAAMTSPERRRHTRDLAPAIHASPISRAAAAAARGGSGSSGGGGSRVVSD
QPRSSRAMPAAVISTTSAGGSSRRGRRELQPPHSINMTEGDEGPPSRPRK
NSGGGGPQFRGDGGGGRPSGERRERGSRGAGGGRPRRSGRGGKNGLPRGR
AAGRNGRRGRRSVSMPQSGYRGPGAFGLAPVVEGDAEEEEEEEEEEEEEG
EGDETEDDQDMVFKVVNKDAEELVSDSRDPTEEEDVPFDVTPQNYRAGEA
WHPERQVCVRVWLS*