prot_Ecto-sp13_S_contig803.19356.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig803.19356.1
Unique Nameprot_Ecto-sp13_S_contig803.19356.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length296
Homology
BLAST of mRNA_Ecto-sp13_S_contig803.19356.1 vs. uniprot
Match: D8LJV2_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJV2_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 4.600e-169
Identity = 265/295 (89.83%), Postives = 267/295 (90.51%), Query Frame = 0
Query:    1 MGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQYDHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELADMNAVDVSEFFAVCIEFAPPPTAELKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGEKVHHGDFGSGDGREGRWRACLAESGKVYYWHTVSREVTWDRPPGAEAYVPSVMPKTDQTLTAAA 295
            MGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQ+DHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELAD+ AVD SEFFAVCIEFAPPPTAELKA XXXXXXXXXXXXXXXX                       GIGEKVHHGDFGSGDGREGRWRACLAESGKVYYWHTVSREVTWDRP GAEAYVPSVMPK DQTLTAAA
Sbjct:  116 MGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQFDHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELADIYAVDASEFFAVCIEFAPPPTAELKAAXXXXXXXXXXXXXXXXGTVAAAPGLEGGAADSTAAGRGGGIGEKVHHGDFGSGDGREGRWRACLAESGKVYYWHTVSREVTWDRPAGAEAYVPSVMPKADQTLTAAA 410          
BLAST of mRNA_Ecto-sp13_S_contig803.19356.1 vs. uniprot
Match: F0WM81_9STRA (Uncharacterized protein AlNc14C153G7585 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM81_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.900e-15
Identity = 54/170 (31.76%), Postives = 86/170 (50.59%), Query Frame = 0
Query:   14 SARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQYDHAYTLESREERMDVLTSALWRGVYMSDESIK--EPHVRVLAEYVDAELADMNAVDVSEFFAVCIEFAPPP 181
            S ++LQ+C+N +   E Y   ++  +F  +   L  +VWL+ RRL +EG+ G+ +QEL+FD LW ET  ++R  +VSE+ + KYL + QQ  F   V YD     +  E       +A+   +   D+S    E HVR   EY+   +  +  +D        I +A  P
Sbjct:   67 STKVLQSCVNQSAVPELYQAIRLRPDFRGQQALLMVHVWLIHRRLAKEGDAGRVLQELVFDRLWEETVLRIRHQQVSELTVNKYLKQVQQVCFNACVAYD-----KGLERSKTDFNTAIRCHLLAQDDSHSPDEDHVRATYEYIQQNMQMLEKLDEKYLMKGVIPWAQAP 231          
BLAST of mRNA_Ecto-sp13_S_contig803.19356.1 vs. uniprot
Match: A0A484DVK9_BRELC (WW domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVK9_BRELC)

HSP 1 Score: 82.0 bits (201), Expect = 9.730e-15
Identity = 51/173 (29.48%), Postives = 89/173 (51.45%), Query Frame = 0
Query:   14 SARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQYDHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELADMNAVDVSEFFAVCIEFAPPPTAELK 186
            S+ + Q+C+N+    ++Y    +   F  +   L  +VWL+ RRL  EGE+GK +QEL+FD LW ET  ++R + +SE+ + KYLA+ QQ  F   + YD     +  +E      +A+ + +  ++ +       ++AE++  EL ++  VD        I + P P    K
Sbjct:   15 SSAVFQSCMNHTAQPDYYRALGLPQSFRAQQAILMAHVWLVHRRLALEGEKGKIMQELVFDRLWEETVVRIRYLNISELTVNKYLAQVQQICFNACIAYD-----KGLKEGPRYFQTAVAQHLLENESTEGLRIASIMAEHMKRELKNLEKVDAKYIMLGTIPWTPLPETHAK 182          
BLAST of mRNA_Ecto-sp13_S_contig803.19356.1 vs. uniprot
Match: A0A024GN83_9STRA (WW domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GN83_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.830e-10
Identity = 37/100 (37.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:   14 SARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQYD 113
            S ++LQ+C+N +     Y   ++  +F  +   L  +VWL+ RRL ++GE G+ +QE +FD LW ET  ++R  +VSE+ + KYL + QQ  F   + YD
Sbjct:   88 SVKLLQSCVNQSAVPNLYHAIRLRPDFRGQQALLMAHVWLVHRRLGKQGEAGRVLQEGVFDRLWEETVSRIRHQKVSELTVNKYLKQVQQVCFNACIAYD 187          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig803.19356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJV2_ECTSI4.600e-16989.83WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
F0WM81_9STRA5.900e-1531.76Uncharacterized protein AlNc14C153G7585 n=1 Tax=Al... [more]
A0A484DVK9_BRELC9.730e-1529.48WW domain-containing protein n=1 Tax=Bremia lactuc... [more]
A0A024GN83_9STRA2.830e-1037.00WW domain-containing protein n=1 Tax=Albugo candid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 243..275
e-value: 2.6E-5
score: 33.7
IPR001202WW domainPFAMPF00397WWcoord: 248..273
e-value: 5.5E-7
score: 29.6
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 242..275
score: 10.285
NoneNo IPR availableGENE3D2.20.70.10coord: 241..283
e-value: 1.7E-9
score: 38.7
NoneNo IPR availablePANTHERPTHR12184:SF1UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 1coord: 1..187
IPR021150Ubiquinol-cytochrome c chaperone/UPF0174PFAMPF03981Ubiq_cyt_C_chapcoord: 43..172
e-value: 3.0E-16
score: 59.8
IPR007129Ubiquinol-cytochrome c chaperone, CBP3PANTHERPTHR12184BASIC FGF-REPRESSED ZIC BINDING PROTEIN HOMOLOG ZIC3-BINDING PROTEINcoord: 1..187
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 246..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig803contigEcto-sp13_S_contig803:7844..11693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig803.19356.1mRNA_Ecto-sp13_S_contig803.19356.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig803 6846..12759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig803.19356.1 ID=prot_Ecto-sp13_S_contig803.19356.1|Name=mRNA_Ecto-sp13_S_contig803.19356.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=296bp
MGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTN
VWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAE
AQQHTFITLVQYDHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRV
LAEYVDAELADMNAVDVSEFFAVCIEFAPPPTAELKAASKKAAKGGGGKR
SSRKGTVAAAPGLEGGAADLTAAGGGGGIGEKVHHGDFGSGDGREGRWRA
CLAESGKVYYWHTVSREVTWDRPPGAEAYVPSVMPKTDQTLTAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR021150Ubiq_cyt_c_chap/UPF0174
IPR007129Ubiqinol_cyt_c_chaperone_CPB3
IPR036020WW_dom_sf