mRNA_Ecto-sp13_S_contig8027.19348.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: D8LCA9_ECTSI (Abhydrolase domain containing 14B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA9_ECTSI) HSP 1 Score: 140 bits (354), Expect = 3.890e-40 Identity = 71/74 (95.95%), Postives = 71/74 (95.95%), Query Frame = 1
Query: 1 EGSIDVAGTQVIFLGNLGSSPPSPTGEEAGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLPTRVT 222
EGSIDV GTQV FLGNLGSSP SPTGEEAGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLPTRVT
Sbjct: 40 EGSIDVVGTQVSFLGNLGSSPSSPTGEEAGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLPTRVT 113
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: UPI0019A9AD6A (alpha/beta hydrolase n=1 Tax=Okeania sp. KiyG1 TaxID=2720165 RepID=UPI0019A9AD6A) HSP 1 Score: 58.2 bits (139), Expect = 1.680e-9 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 1
Query: 100 NVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLP 210
+VLLLHGA FSAQTWQ++GTL LLA G+R AV++P
Sbjct: 29 SVLLLHGASFSAQTWQEIGTLELLAMTGYRAVAVDIP 65
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: A0A6M0G9B3_9CYAN (Alpha/beta hydrolase (Fragment) n=1 Tax=Symploca sp. SIO2E6 TaxID=2607809 RepID=A0A6M0G9B3_9CYAN) HSP 1 Score: 57.0 bits (136), Expect = 2.640e-9 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 85 AGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLP 210
A + VLLLHGA FSAQTWQ++GTL LLA G++ AV+LP
Sbjct: 15 ATTAKTVLLLHGASFSAQTWQEIGTLQLLAQKGYQGIAVDLP 56
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: A0A7J8HMA3_ROUAE (Abhydrolase domain containing 14B n=1 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8HMA3_ROUAE) HSP 1 Score: 56.2 bits (134), Expect = 7.950e-9 Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 1 EGSIDVAGTQVIFLGNLGSSPPSPTGEEAGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLP 210
EG++ V G + F P G +A +VLLLHG +FS++TWQ+LGTL LA G+R A++LP
Sbjct: 8 EGTVQVQGQSLFFR------EARPAGGQAARF-SVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLP 70
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: A0A6P0I333_9CYAN (Alpha/beta hydrolase n=13 Tax=Okeania TaxID=1458928 RepID=A0A6P0I333_9CYAN) HSP 1 Score: 58.2 bits (139), Expect = 1.770e-8 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 1
Query: 100 NVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLP 210
+VLLLHGA FSAQTWQ++GTL LLA G+R AV++P
Sbjct: 29 SVLLLHGASFSAQTWQEIGTLELLAMTGYRAVAVDIP 65
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: A0A6M0GFV7_9CYAN (Alpha/beta hydrolase n=1 Tax=Symploca sp. SIO2E6 TaxID=2607809 RepID=A0A6M0GFV7_9CYAN) HSP 1 Score: 57.8 bits (138), Expect = 1.810e-8 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 85 AGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLP 210
A + VLLLHGA FSAQTWQ++GTL LLA G++ AV+LP
Sbjct: 7 ASTAKTVLLLHGASFSAQTWQEIGTLQLLAQKGYQGIAVDLP 48
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: G3TN06_LOXAF (Abhydrolase domain containing 14B n=2 Tax=Afrotheria TaxID=311790 RepID=G3TN06_LOXAF) HSP 1 Score: 58.2 bits (139), Expect = 1.830e-8 Identity = 33/70 (47.14%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 1 EGSIDVAGTQVIFLGNLGSSPPSPTGEEAGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLP 210
EGSI V G + F L P G +A +VLLLHG +FS++TWQ+LGTL LA G+R A++LP
Sbjct: 8 EGSIQVQGQNLFFREML------PGGGQASRF-SVLLLHGVRFSSETWQNLGTLHKLAQAGYRAVAIDLP 70
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: UPI0019F2D9ED (Alpha/beta hydrolase n=1 Tax=Oscillatoriales cyanobacterium LEGE 11467 TaxID=1828826 RepID=UPI0019F2D9ED) HSP 1 Score: 57.8 bits (138), Expect = 2.320e-8 Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 10 IDVAGTQVIFLGNLGSSPPSPTGEEAGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLP 210
++++G ++ +L G++A A VL LHGA F AQTWQD+GTL LLA G+R AV+LP
Sbjct: 13 VNLSGAKIHYL---------EVGDKA-ATTTVLCLHGASFRAQTWQDIGTLKLLADGGYRAVAVDLP 69
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: A0A673TC52_SURSU (Abhydrolase domain containing 14B n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A673TC52_SURSU) HSP 1 Score: 57.4 bits (137), Expect = 2.390e-8 Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 1 EGSIDVAGTQVIFLGNLGSSPPSPTGEEAGAVRNVLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLP 210
EGSI V G + F P G +A +VLLLHG +FS++TW +LGTL LA NG+R A++LP
Sbjct: 8 EGSIQVQGQSLFFR------EARPGGGQAARF-SVLLLHGIRFSSETWLNLGTLHRLAQNGYRAVAIDLP 70
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Match: A0A7C9TXA5_9CYAN (Alpha/beta hydrolase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TXA5_9CYAN) HSP 1 Score: 57.8 bits (138), Expect = 2.520e-8 Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 16 VAGTQVIFLGNLGSSPPSPTGEEAGAVRN--VLLLHGAKFSAQTWQDLGTLSLLATNGFRVAAVNLP 210
VAG Q+ +L EAG N +L LHGA FSAQTWQ++G+L LLA G+R AV+LP
Sbjct: 12 VAGKQIHYL-------------EAGQPANPSILFLHGASFSAQTWQEIGSLELLAIQGYRAVAVDLP 65 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8027.19348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8027.19348.1 >prot_Ecto-sp13_S_contig8027.19348.1 ID=prot_Ecto-sp13_S_contig8027.19348.1|Name=mRNA_Ecto-sp13_S_contig8027.19348.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp EGSIDVAGTQVIFLGNLGSSPPSPTGEEAGAVRNVLLLHGAKFSAQTWQDback to top mRNA from alignment at Ecto-sp13_S_contig8027:6754..6978+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8027.19348.1 ID=mRNA_Ecto-sp13_S_contig8027.19348.1|Name=mRNA_Ecto-sp13_S_contig8027.19348.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8027:6754..6978+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8027:6754..6978+ >mRNA_Ecto-sp13_S_contig8027.19348.1 ID=mRNA_Ecto-sp13_S_contig8027.19348.1|Name=mRNA_Ecto-sp13_S_contig8027.19348.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8027:6754..6978+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |