mRNA_Ecto-sp13_S_contig8026.19347.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI) HSP 1 Score: 930 bits (2404), Expect = 0.000e+0 Identity = 508/578 (87.89%), Postives = 517/578 (89.45%), Query Frame = 2
Query: 221 MSRQRFTDDPSTGRRAPPSSSEAALDTTQLLERLARSIISERCGRRDSDAAAAPSEVQIHGAVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAGLKNRAPMLHLLHALSDTGTAAXXXXXXXX-GAAPPTIPQMPPRVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRAGRRRSVESRAMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPAGVYATR--LSRTLTSICIALRTCVA-----------HSPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPMAKATAQATTLEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
MSRQRFTDDPS GRRAPPSSSEAALDTTQLLERLARSIISERCGRRDSDAAAAPSE QIHGAVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSS SGVEAALRFDDLHRRLKLLAGLKNRAPMLHLLHAL+DTGTAAXXXXXX G APP IPQMPPRVFSEPA+GLSGIGHVVGQGL A A A G GYHGGGVSNGREPVG+GRRH EA G RAGR RSV SR MPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTH +H G R + RT+ C +L V H+ FFVQE+KLATVLKETLWHDRY LDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPMAKA AQATTLEYGNT SLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ
Sbjct: 1 MSRQRFTDDPSMGRRAPPSSSEAALDTTQLLERLARSIISERCGRRDSDAAAAPSEAQIHGAVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSSSGVEAALRFDDLHRRLKLLAGLKNRAPMLHLLHALTDTGTAAXXXXXXNHHGVAPPAIPQMPPRVFSEPAAGLSGIGHVVGQGLPATATASVGGDGYHGGGVSNGREPVGEGRRHTEAMGGRAGRHRSVVSRGMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHVDH---------GDPFVRGLVQRTMVRACESLFLMVKLWMFEGELVDHHNEFFVQEKKLATVLKETLWHDRYHLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPMAKAAAQATTLEYGNTISLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 569
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: A0A2H9ZUR9_9ASPA (Gamma-tubulin complex component n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZUR9_9ASPA) HSP 1 Score: 199 bits (506), Expect = 6.600e-51 Identity = 174/536 (32.46%), Postives = 255/536 (47.57%), Query Frame = 2
Query: 362 SDAAAAPSEVQIHGAVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAGLKNRAPMLHLLHALS-DTGTAAXXXXXXXXGAAPPTIPQMPPRVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRAGRRRSVESRAMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAGGTEG--LTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPAGVYATRLSRTLTSICIAL----RTCVAH-------SPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWI-MGPMAKATAQATT----LEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
+DA+AA A+R +R+L S + P ++ DE S+ + I+ RL + S AAL F DLH +L A L NR +L+LL+ LS D +A + P +P +P + S P + G V G GGGV R + +R R + TEVTE L++ +LYA QGID +Y+++ GY L L++ R +V + E+GWLF V Y + G + QAF +L+E+L++YY+L+AVL +Q + G +GG G L+L RL VW +PM R+ +MA LV L+GGA+A +H +H P + +SR L +C L RT V + FF+ + V E+LW + YQL +LP FI +A +IL GK+INFLR C DS W+ A A ATT L YG T +L A+V + + L++++ YR K H +K++LL GQ
Sbjct: 29 NDASAA-------AALRYALRLLASRMS-PSLIPDELSLVESIKRRLAVSGRSP-----AALAFADLHSKLSARAPLLNRWALLYLLNTLSLDRRRSA--------SSPPGGLPFLPLQPASHPPRASTASGAV----------------GAGGGGVV---------RVAKDPENIREIALREFADLVIA--DTEVTESALVRDVLYACQGIDGRYVRFDRSSDGYDLPESLKVPRHTRTIVRRLCELGWLFRKVRDYISEITVDRQ-FEIGTVGQAFCSALQEELSDYYKLLAVLESQSSNPIPSAGSDSGGGTGNYLSLMRLAVWFTEPMVRMRLMAVLVDCCRVLRGGAMAGAIHNRAQH-----GDP--LVQEFMSRLLRRVCSPLFEMVRTWVLEGELDDLFAEFFIVSQP---VKAESLWREGYQLQSTMLPSFISSMLAQRILRTGKSINFLRVCCEDSGWVDAATEAAAHVGATTRRGGLGYGETNALEALVIEAAKRVDRHLMNVIHNRYRFKDHCLAIKRYLLLGQ 505
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: D8TC06_SELML (Gamma-tubulin complex component n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TC06_SELML) HSP 1 Score: 197 bits (502), Expect = 2.600e-50 Identity = 171/579 (29.53%), Postives = 277/579 (47.84%), Query Frame = 2
Query: 284 EAALDTTQLLERLARSIISERCGRRDSDAAAAPSEVQIHGAVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAG---LKNRAPMLHLLHALSDT---------GTAAXXXXXXXXGAAPPTIPQMPP----RVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRAGRRRSVESRAMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRY-NQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAGGTEG---LTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPAGVYATRLSRTLTSICIALRTCVA-----------HSPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPM-----AKATAQATTLEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
EA L+++L + I + +V A R +RI+ S I L DEA++A+ I+ +LV SS AL F DLHRRL L+G ++NR +L+LL A+++ GTA AA +P +P R+ + P +G +V ++ + V +AT +R E + + + E++E L++ ILYA QGID +Y+++ +E GY++D LR+ R +V + E+GWLF V + +++++ + V G + QA +L+E+L+EYYRL+AVL AQL+ + + VG G L+L+RL+VW+ +P+ R+ +MA LV L+GGA+A +H H +H P + + +SR L +C L V + FF+ + V E LW + Y L +LP FI + +A +IL GK+INFLR C D +W A A+A A +L YG T L +V + + ++ ++ Y+ + H +K++LL GQ
Sbjct: 2 EAGDGVAGLVKQLVQRIFPAAKQHQQQQRGDGDLDVVADQAFRYAMRIVGSRIVSSL-ASDEAAMAESIKRQLVMEGRSSD-----ALTFADLHRRLAALSGPGSIENRWAVLYLLRAVAEDQRRERAETRGTAVPLTSTISAHAAAGGLPALPDSTNERLVAAPQNGXXXXXVLV---------------------LARDSDTV-------KATALR-------EFGDLTQESFELSEAALVRDILYACQGIDGRYVRFDKEADGYIVDESLRIPRATRVLVRRLCEVGWLFKRVQGHISETLEQATMEV-IGTVGQALSSALQEELSEYYRLMAVLEAQLHNQIPFLAVGETGKSVGNYLSLRRLWVWLAEPLARMRLMAVLVDDCKCLRGGAMAGAIHAHAQH-----GDP--LVRSFMSRLLRRVCSPLFEMVRRWVLEGEVDDLYGEFFILAQP---VKAEALWREGYSLQSGMLPSFIPEPLAQRILRTGKSINFLRVCCEDQQWATEAAEALAAAGASANAGSLGYGETEVLETLVVEAAGRIDRHVIKIIYERYKFRDHCLAIKRYLLLGQ 528
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: A0A2I0WX22_9ASPA (Gamma-tubulin complex component n=2 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0WX22_9ASPA) HSP 1 Score: 196 bits (499), Expect = 5.650e-50 Identity = 177/563 (31.44%), Postives = 264/563 (46.89%), Query Frame = 2
Query: 299 TTQLLERLARSIISERCGRRDSDAAAAPSEVQIHGAVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAGLKNRAPMLHLLHALS-DTGTAAXXXXXXXXGAAPPTIPQMPPRVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRAGRRRSVESRAMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRY------NQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAGGTEG--LTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPAGVYATRLSRTLTSICIAL----RTCVAH-------SPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPM-AKATAQATT----LEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
T +L+ L ++S G R + A S V AVR +R+L+S + P ++ DE S+ + I+ RL + SS AAL F DLH +L A L NR +L+LL++LS D +A P +P P R AAA++ G G +S G V + +R E + EVTE L++ +LYA QGID +Y+++ GY L L++ R++V + E+GWLF V Y +Q + G+ G QAF +L+++L++YY+L+AVL +Q G +GG+ G L+L+RL VW+ +PM R+ +MA LV +L+GGA+A +H H +H G R L +C L RT V + FF+ + V E+LW + Y + +LP FI +A +IL GK+INFLR C DS W A A ATT L YG T +L A+ + + L+ ++ YR K H +K++LL GQ
Sbjct: 6 TAELVRELVLRLLSS--GGRSTPLAGDSSTV---AAVRYALRLLSSRMS-PSVLPDELSLVESIKRRLAVSGRSS-----AALAFADLHSKLSAHAPLLNRWALLYLLNSLSLDRRRSASSLSGGL-----PFLPLQPSHT------------------ARPAAASIAG------GAISGGVLLVAKDPENIREIALR-------EYADLVMEDNEVTESALVRDVLYACQGIDGRYVRFDRSSDGYDLPESLKIPRPTRSIVRRLCELGWLFRKVRGYISESIMDQQFEVGTVG-------QAFCSALQDELSDYYKLLAVLESQSANPIPSAGSDSGGSPGNYLSLRRLSVWLAEPMVRMRLMALLVDGCQELRGGAMAGAIHAHAQHGDPLVQEFMG-------RLLRRVCSPLFEMVRTWVLEGELEDVFAEFFISSQP---VKAESLWREGYDIQSSMLPDFISPLLAQRILRTGKSINFLRVCCEDSGWAEAAAEAAAHVGATTRRGGLGYGETDALEALAVEAAKRIDRHLMDVIHKRYRFKDHCLAIKRYLLLGQ 504
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: C1EDY5_MICCC (Gamma-tubulin complex component (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EDY5_MICCC) HSP 1 Score: 196 bits (497), Expect = 9.180e-50 Identity = 173/521 (33.21%), Postives = 247/521 (47.41%), Query Frame = 2
Query: 404 AVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAGLKNRAPMLHLLHALSDTGTA---AXXXXXXXXGAAPPTIPQMPPRVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRAGRRRSVESRAMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLN------LESEGVGVG---AGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPA----GVYATRLSRTLTSICIALRTCVAHSPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIM--GPMAKATAQATTLEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
AVRL L + + EP DE + A I+ +L + S++ AA++F +LHRRL GLK R LH L +S+ A A GA T R ++P S + G GL A A S G G + G + G + A R E A E+ E+ L++ +L+A QGID ++I+Y + + YV+DP + R + ++ E+GWLF V VD G G ++QAF +++ +L +YYRLIAVL AQ LE+ G G AGG LTL+RL VW+ +P++RL ++A LV AAA +GGAL LH H +H AT A A R + + +A FFV V +E LW RY ++ + P FI + A +L +GK+INFLRR C D W P+A A A A L YGN +L A+V + L ++ Y+ H +K++LL GQ
Sbjct: 3 AVRLVGSCLATSV-EP----DEGATADAIKRKLTREGSAT-----AAVKFAELHRRLAQQPGLKARWATLHALLRVSEDRRAEDRAVVPAGGGIGAGAATA-----RHIADPLSAAAAAG-----GLPALADPDPARSLAAGDGSTLGLDHPG-----SRALAYR-------ELAAEAETNLEIGEQELVRDVLFACQGIDGRHIRYNPQMASYVVDPAAPVRPGARDLARKLTELGWLFRRVRAALGGVDEAGLGGDGGSVRQAFRAAVQAELADYYRLIAVLEAQAQVPMASALEAPTTGTGGGTAGGGTYLTLRRLSVWLAEPLRRLRLLAVLVDAAADARGGALLRALHEHAKHGDPATRATVERLLAAAAEPALRMVRAWVVAGELEDPRGEFFVASDP--AVGEEDLWRSRYFINDEMRPPFISEATAADVLRVGKSINFLRRRCDDENWERERAPVAAAAAAAGGLSYGNPAALDALVSEAKRRIDRALRGVLFDRYKFAEHCDAVKRYLLLGQ 489
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: A0A2K1IH10_PHYPA (Gamma-tubulin complex component n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IH10_PHYPA) HSP 1 Score: 193 bits (490), Expect = 1.490e-48 Identity = 166/543 (30.57%), Postives = 263/543 (48.43%), Query Frame = 2
Query: 395 IHGAVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAG---LKNRAPMLHLLHALSDT---------GTAAXXXXXXXXGAAPPTIPQMPPRVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRA-----GRRRSVESRA---MPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRY-NQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESE-GVGVGAGGTEG--LTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPAGVYATRLSRTLTSICIAL-RTCVA-------HSPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPM-----AKATAQATTLEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
+H A +RI+ S I P + DEA+VA+ I+ +LV+ S+ AL F DLHRRL +G +++R +L+LL A+ + GTA AA +P +P S H V G +S +G S + + GV G +S R + + ++V+E +++ +LYA QGID +Y+KY E+ GY++D +R+ R +V + E+GWL+ V + ++S++ G G + QAF +L+E+L ++YRL+AVL +Q++ VG +G + G L+L+RL VW+ +P+ R+ +MA LV L+GGA+A +H H +H + + RL R ++S + R V ++ FFV + +V E LW + YQL +LP FI + +A +IL GK+INFLR C D W A A+A L YG L A+V + + L+ +M YR H +K++LL GQ
Sbjct: 41 VHRAHEYAMRIIGSRIS-PSLANDEAAVAEAIKRQLVQENRSAD-----ALSFADLHRRLSSFSGPGSIESRWALLYLLRAIVEDQKRERTGTRGTAISFTSTFSGAAAHGGLPSLPTNSMHPKLPSYSPE-HDVSSGRS--------YSSRNGTSQSQSLSHSVRAQLPSSPGGVLILTKDDGNAKSAAMREYLEIIQSESDVSEMAIVRDVLYACQGIDGRYVKYNEDADGYMIDESIRVPKSTRTLVRRLCEVGWLYLRVKNHISESLENGPLEA-IGTVGQAFCAALQEELADFYRLMAVLESQVHHPIPLMVGADSGNSVGNYLSLRRLVVWLGEPLVRMRLMAVLVDDCKTLRGGAMAGAIHMHAQHGDSLVR----TFLRRLLRQVSSPLFEMVRRWVLEGEIDDYYAEFFVSAQ---SVKAEALWREGYQLQTAMLPSFIPEPLAQRILRTGKSINFLRVCCSDQGWAQAASEAVAAAGASASGGILGYGEIEVLEALVAEAAGRIDKHLIQIMYKRYRFPEHCLAIKRYLLLGQ 560
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: A0A0D6QZG6_ARACU (Gamma-tubulin complex component n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QZG6_ARACU) HSP 1 Score: 192 bits (488), Expect = 2.060e-48 Identity = 163/525 (31.05%), Postives = 251/525 (47.81%), Query Frame = 2
Query: 404 AVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAGLKNRAPMLHLLHALSDTGTAAXXXXXXXXGAAPPT---IPQMPPRVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRAGRRRSVESRAMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRY-NQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPAGVYATR--LSRTLTSICIALRTCVA-----------HSPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPMAKATAQATT-----LEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
A R +RI+ S I P + DEA++A+ I+ +LV S+ AL F DL+RR G+ N+ +L+LL A+ + +AP +P +PP +S G + + L AA GG + ++P +A +R E + R EVTE L+K +LY QGID ++IK+ + G+ + RL R ++ + E+GWL+ V Y ++SV+ G G + QAF SL+E+L+++Y+L+AVL AQ++ +G L+L+RL VW+ +P R+ +MA LV L+GGA+A +H H +H G R + R L +C +L V +S FFV + +V E LW D YQL +LP FI + +A +IL GK+INFLR C D W A A T+ L YG T +L +V + + L+ +M G Y+ + H +K++LL GQ
Sbjct: 33 AYRYAMRIVGSRIT-PSLANDEAAMAESIKRQLVHEGRSAD-----ALTFADLYRRYAAQQGIVNKWGVLYLLKAVGEDRRRERVGHFASTISAPAAAGGLPALPPENYS----GRKTL--ETSKTLDQAAP--------QGGVLLLSKDPE-----NARVAALR-------EYVDVCRDEAEVTEGALVKDVLYTCQGIDGRFIKFDRDLDGFAVTESCRLPRTTRVLIRRLCEIGWLYKKVKDYISESVEHGPIEA-IGTVGQAFCASLQEELSDFYKLLAVLEAQVHNPIPVMGESKSPANYLSLRRLMVWLAEPAVRMRLMAVLVDDCRNLRGGAMAGAIHMHAQH---------GDPLVRDFMKRLLRRVCSSLFEMVRSWVLEGELNDIYSEFFVVGQ---SVKAEALWRDGYQLHCAMLPSFIPEPLAKRILRTGKSINFLRVCCEDQGWADAAAEAAAAAGTSTRRGGLGYGETEALETLVVEAAKRIDRHLIEIMYGRYKFREHCLAIKRYLLLGQ 512
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: A0A1D1YX60_9ARAE (Gamma-tubulin complex component n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YX60_9ARAE) HSP 1 Score: 192 bits (487), Expect = 2.610e-48 Identity = 173/566 (30.57%), Postives = 255/566 (45.05%), Query Frame = 2
Query: 299 TTQLLERLARSIISERCGRRDSDAAAAPSEV--QIHGAVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAG---LKNRAPMLHLLHALSDT----GTAAXXXXXXXX--GAAPPTIPQMPPRVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRAGRRRSVESRAMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQL-NLESEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPAGVYATRLSRTLTSICIALRTCV-----------AHSPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPMAKATAQATT-----LEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
T L++ L ++S S AAA P A+R RIL+S + P + DE ++A+ I+ LV SS AL F DLH R +G ++NR +L+LL ++S+ G+AA P++P PP G R A GG +G GG + ++P + +R E + T V+E L+K +LYA QGID +Y++Y GY L LR+ R V + E+GWLF V Y G G I QAF +L+++L++YY+L+AVL +Q N V V G LTL+RL VW+ +P R+ +MA LV L+GGA+A +H H +H G R L +C L V + FF+ + V E+LW + Y++ +LP FI +A +IL GK+INFLR C D W + A T+ L YG T +L A+V + + L+ ++ G YR + H +K++LL GQ
Sbjct: 6 TLDLVKELVLRLLSSPSPLASSTAAADPGHPPPDFPKALRYAHRILSSRMS-PSVAADEPAMAESIKRHLVNQGRSSD-----ALAFADLHARFAARSGPGAVQNRWGLLYLLKSVSEDRRKGGSAAQPRVSFSSVVSGGLPSLPLEPP------------------YGGRVARRGAGGGTG--GGVLMVSKDPD-----NIREIALR-------EYADLVGEDTAVSEPALVKDVLYAVQGIDGRYVRYDAASDGYDLPDPLRVPSSTRTTVRRLCELGWLFRKVKGYISDCTDGFPSEDVGTIGQAFCAALQDELSDYYKLLAVLESQSSNHPIPPVSVSVSGGNYLTLRRLAVWLAEPTVRMRLMAVLVDGCRSLRGGAMAGAIHGHAQHGDPLVQEFMG-------RLLRRVCSPLFEMVRSWVLEGQLDDVFAEFFIVSQP---VKAESLWREGYRIQSSMLPSFISPTLASRILRTGKSINFLRVCCEDGGWAVAAAEAAAHVGTSTRKGVLGYGETDALEALVVEAAKRIDRHLMEVVHGRYRFRDHCLAIKRYLLLGQ 523
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: A0A6G0WYN0_9STRA (Spindle pole body component n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYN0_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.090e-47 Identity = 161/513 (31.38%), Postives = 248/513 (48.34%), Query Frame = 2
Query: 413 LCIRILTSHIGEPLMVE----DEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAGLKNRAPMLHLLHALS-DTGTAAXXXXXXXXGAAPPTIPQMPPRVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRAGRRRSVESRAMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTVVRYNQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGAQLNLESEGVGVGAG-GTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPAGVYATRLSRTLTSICIALRTCV-------AHSPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPMAKATAQATTLEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
L +RIL+S G V+ D V Q I L +TP + A RF+ LH+ L L +A +L LL LS DT +A P++P PP+ S+PA + LR + S +H +H + RA R+ + ++ E LL+ +LYAFQGIDS+YI Y + + + + L R ++ ++ E+GWL+ V Y A + GV + Q+F +LK +L+++YRLIA+L AQ++++++ + G LTL+RL VW +DP+ RL VMA LV + L GGALAS ++ + EH T L++ T I ++ AH FFV ++V E LW +Y L +LP+FI +EVA I +GK+INF+R CGDSEW+M A Q L + + + + + + TN+ + ++L Y++ H R LK++LL GQ
Sbjct: 25 LSLRILSSRFGNTHDVKQRTNDMLEVTQRITRHLKETPQEYDPKI-AVQRFESLHQDLMTYPMLHKKAAILSLLLKLSLDTDASALYV---------PSLPAPPPK--SQPAMPSKEPAQTK-ESLRRSK------SSWH--------------EKHMQQEAYRAAFRKQDNA------AIDIPESVLLQEVLYAFQGIDSKYIFYNPTLDRFEVARHVGVSLPMRDLIRKLTEVGWLYNRVQAYLSRTMAANRGV----VLQSFCHALKAELSDFYRLIAILSAQVDMDADKFPLPESEGLPELTLKRLVVWTQDPLDRLRVMAALVDSVDGLSGGALASGIYMYMEHGDPFVRQ---FIETLLNQVATPILNMIQKWTLEGLLDDAHEEFFVACD--SSVTDEHLWSQKYFLRWSMLPQFISREVANTIFVMGKSINFIRTCCGDSEWVMD----AKLQTQNLTFDHWMEFQQWISAAANETNSYVTKILLEKYQMLDHCRALKQYLLLGQ 485
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Match: A0A3L6E058_MAIZE (Gamma-tubulin complex component n=2 Tax=Zea mays TaxID=4577 RepID=A0A3L6E058_MAIZE) HSP 1 Score: 183 bits (465), Expect = 4.090e-46 Identity = 164/525 (31.24%), Postives = 251/525 (47.81%), Query Frame = 2
Query: 401 GAVRLCIRILTSHIGEPLMVEDEASVAQVIRTRLVKTPSSSGSGVEAALRFDDLHRRLKLLAGLKNRAPMLHLLHALSDTGTAAXXXXXXXXGAAPPTIPQMPPRVFSEPASGLSGIGHVVGQGLRAAAAAVGGWSGYHGGGVSNGREPVGDGRRHAEATGVRAGRRRSVESRAMPRRTTEVTERTLLKGILYAFQGIDSQYIKYCEEESGYVLDPRLRLGLKQRAMVTEMLEMGWLFTTV---VRYNQSVDAGSAGVGPGRIQQAFVFSLKEDLTEYYRLIAVLGA-QLN-LESEGVGVGAGGTEGLTLQRLFVWVKDPMKRLNVMATLVAAAAQLKGGALASCLHTHPEHCTAATNAPAGVYATRLSRTLTSICIALRTCV-----------AHSPFFVQERKLATVLKETLWHDRYQLDLCLLPKFIDQEVAVKILTIGKAINFLRRLCGDSEWIMGPMAKATAQATT-----LEYGNTTSLRAVVESCSALTNARLVHLMLGPYRLKSHLRVLKKFLLHGQ 1912
GA+R RIL+S + P ++ DE ++A+ I+ RL ++SG + AL F DLH +L + A + P+L+LL +LS AA AA +P +P + A+ + G V G R A GG V ++P +R R + TEV+E L++ +LYA QGID +Y++Y + Y L +R+ R +V ++ E+GWLF V + N S A G + QAF +L+E+L++YY+L+AVL + LN + + G G L+L+RL VW+ +P R+ +MA LV L+GGA+A +H H +H P ++ + R L +C L V + FF+ + V E+LW + Y + +LP FI +A +IL GK+INFLR C DS W A TT L YG T +L A+V + + L+ ++ YR K H +K++LL GQ
Sbjct: 34 GALRFAHRILSSRLA-PAVLPDEHALAESIKRRL----AASGRP-DDALSFADLHSKLSVRARPASLWPLLYLLDSLSSQYRAA---------AAASCLPNLPIAALPQNATSGTAPGAGVRPGSRTHGAPPGGL-------VLVSKDP----------DNIREIALREYTELVIDE--TEVSEAALVRDVLYACQGIDGRYVRYDKSVDSYDLPDGVRVPRSTRTLVRKLCELGWLFRKVRGFISDNISRSPSDAATEVGTVTQAFCSALQEELSDYYKLLAVLESYSLNPIPTPGSDSGVSSNY-LSLRRLAVWLAEPAVRMRLMAVLVDGCRGLRGGAMAGVIHGHAQH-----GDP--MFQEFMGRLLRRVCSPLFEMVRSWVLEGELEDVFAEFFIVGQP---VKAESLWREGYLIQSDMLPAFISPVLAKRILRTGKSINFLRVCCDDSGWADAAAEAAAYVGTTTSRGGLGYGETDALEALVVEAAKRIDRHLMDVIHKRYRFKDHCLAIKRYLLLGQ 513 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8026.19347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8026.19347.1 >prot_Ecto-sp13_S_contig8026.19347.1 ID=prot_Ecto-sp13_S_contig8026.19347.1|Name=mRNA_Ecto-sp13_S_contig8026.19347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=567bp MSRQRFTDDPSTGRRAPPSSSEAALDTTQLLERLARSIISERCGRRDSDAback to top mRNA from alignment at Ecto-sp13_S_contig8026:463..7119- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8026.19347.1 ID=mRNA_Ecto-sp13_S_contig8026.19347.1|Name=mRNA_Ecto-sp13_S_contig8026.19347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6657bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8026:463..7119- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8026:463..7119- >mRNA_Ecto-sp13_S_contig8026.19347.1 ID=mRNA_Ecto-sp13_S_contig8026.19347.1|Name=mRNA_Ecto-sp13_S_contig8026.19347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1701bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8026:463..7119- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |