mRNA_Ecto-sp13_S_contig8022.19342.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8022.19342.1
Unique NamemRNA_Ecto-sp13_S_contig8022.19342.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: A0A6H5KGC3_9PHAE (Aminotran_1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC3_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 8.420e-39
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 1
Query:    1 DGFPIVGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNSV 213
            D FPIVGSGGSRLLSGNS YAEELEGWIA FHGRPAALLFNSGYDANLGLMSCLPQPGD+VVCDELVHNSV
Sbjct:  109 DSFPIVGSGGSRLLSGNSLYAEELEGWIAPFHGRPAALLFNSGYDANLGLMSCLPQPGDIVVCDELVHNSV 179          
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: A0A835YWE3_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWE3_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.910e-26
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 1
Query:   10 PIVGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNSV 213
            P++GSGGSRLLSGNS YAEELE  +A FH R AAL+FNSGYDANLG++SC+PQ GD VV DELVHNS+
Sbjct:   83 PLMGSGGSRLLSGNSSYAEELEASLAMFHKREAALIFNSGYDANLGVLSCIPQRGDAVVYDELVHNSM 150          
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: A0A6V8HFY5_9EURO (Aminotran_1_2 domain-containing protein n=2 Tax=Eurotiales TaxID=5042 RepID=A0A6V8HFY5_9EURO)

HSP 1 Score: 107 bits (268), Expect = 4.920e-26
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 1
Query:   10 PIVGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNSV 213
            P +GSGGSRLL GNS YAEELE +IARFH  P+ LLFNSG+DAN+G+ SCLPQPGD++V DEL+H SV
Sbjct:   92 PSLGSGGSRLLDGNSAYAEELEKFIARFHDAPSGLLFNSGFDANVGVFSCLPQPGDIIVYDELIHASV 159          
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: A0A8H4Y096_9HYPO (Aminotran_1_2 domain-containing protein n=1 Tax=Fusarium sp. NRRL 66182 TaxID=2692428 RepID=A0A8H4Y096_9HYPO)

HSP 1 Score: 103 bits (256), Expect = 1.900e-25
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 1
Query:   10 PIVGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNS 210
            P++GSGGSRLL GNS  AE+LE  IA FH  PA LLFNSG+DAN+GL+SCLPQPGDVVV DEL+H S
Sbjct:   64 PLLGSGGSRLLDGNSTLAEDLERDIAAFHNAPAGLLFNSGFDANVGLVSCLPQPGDVVVYDELIHAS 130          
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: A0A8H5WLJ6_FUSHE (Acetyltransferase n=1 Tax=Fusarium heterosporum TaxID=42747 RepID=A0A8H5WLJ6_FUSHE)

HSP 1 Score: 103 bits (256), Expect = 3.610e-25
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 1
Query:   10 PIVGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNS 210
            P++GSGGSRLL GNS  AE+LE  IA FH  PA LLFNSG+DAN+GL+SCLPQPGDVVV DEL+H S
Sbjct:   64 PLLGSGGSRLLDGNSELAEDLERDIALFHNAPAGLLFNSGFDANVGLVSCLPQPGDVVVYDELIHAS 130          
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: UPI001D3AC4A7 (pyridoxal phosphate-dependent transferase n=1 Tax=Truncatella angustata TaxID=152316 RepID=UPI001D3AC4A7)

HSP 1 Score: 105 bits (261), Expect = 5.570e-25
Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 1
Query:   13 IVGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNSV 213
            I+GSGGSRLL GNS +AEE+E  IARFHG PA LLFNS YDAN+GL+SC+PQPGD+V+ DE +H SV
Sbjct:   72 ILGSGGSRLLDGNSSFAEEIEQKIARFHGSPAGLLFNSAYDANIGLLSCVPQPGDIVLYDEAIHASV 138          
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: A0A093W114_TALMA (Putative 8-amino-7-oxononanoate synthase n=1 Tax=Talaromyces marneffei PM1 TaxID=1077442 RepID=A0A093W114_TALMA)

HSP 1 Score: 103 bits (256), Expect = 5.910e-25
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1
Query:   16 VGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNSV 213
            +GSGGSRLL GNS YAE+LE +IA FH  P  LLFNSG+DAN+G+ SC+PQPGDV+V DEL+H SV
Sbjct:   70 LGSGGSRLLDGNSAYAEDLENYIANFHNAPTGLLFNSGFDANVGVFSCIPQPGDVIVYDELIHASV 135          
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: A0A1Q5QBQ8_9EURO (Aminotran_1_2 domain-containing protein n=1 Tax=Talaromyces atroroseus TaxID=1441469 RepID=A0A1Q5QBQ8_9EURO)

HSP 1 Score: 104 bits (259), Expect = 7.190e-25
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 1
Query:   10 PIVGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNSV 213
            P +GSGGSRLL GNS YAE+LE +IA FH  PA LLFNSG+DAN G+ SCLPQPGD +V DEL+H SV
Sbjct:   67 PPLGSGGSRLLDGNSEYAEQLEQFIAEFHNAPAGLLFNSGFDANAGVFSCLPQPGDTIVYDELIHASV 134          
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: B6Q7A3_TALMQ (Aminotransferase, putative n=3 Tax=Talaromyces marneffei TaxID=37727 RepID=B6Q7A3_TALMQ)

HSP 1 Score: 103 bits (256), Expect = 2.100e-24
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1
Query:   16 VGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNSV 213
            +GSGGSRLL GNS YAE+LE +IA FH  P  LLFNSG+DAN+G+ SC+PQPGDV+V DEL+H SV
Sbjct:   75 LGSGGSRLLDGNSAYAEDLENYIANFHNAPTGLLFNSGFDANVGVFSCIPQPGDVIVYDELIHASV 140          
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Match: A0A8H4WNQ2_9HYPO (Aminotran_1_2 domain-containing protein n=1 Tax=Fusarium sarcochroum TaxID=1208366 RepID=A0A8H4WNQ2_9HYPO)

HSP 1 Score: 101 bits (251), Expect = 2.120e-24
Identity = 48/67 (71.64%), Postives = 54/67 (80.60%), Query Frame = 1
Query:   10 PIVGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGLMSCLPQPGDVVVCDELVHNS 210
            P +GSGGSRLL GNS  AE LE  IA FH  PA LLFNSG+DAN+GL+SCLPQPGDV+V DEL+H S
Sbjct:   64 PFLGSGGSRLLDGNSTLAENLERDIAAFHNAPAGLLFNSGFDANVGLVSCLPQPGDVIVYDELIHAS 130          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8022.19342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGC3_9PHAE8.420e-3994.37Aminotran_1_2 domain-containing protein n=1 Tax=Ec... [more]
A0A835YWE3_9STRA2.910e-2675.00Pyridoxal phosphate-dependent transferase n=1 Tax=... [more]
A0A6V8HFY5_9EURO4.920e-2672.06Aminotran_1_2 domain-containing protein n=2 Tax=Eu... [more]
A0A8H4Y096_9HYPO1.900e-2573.13Aminotran_1_2 domain-containing protein n=1 Tax=Fu... [more]
A0A8H5WLJ6_FUSHE3.610e-2573.13Acetyltransferase n=1 Tax=Fusarium heterosporum Ta... [more]
UPI001D3AC4A75.570e-2571.64pyridoxal phosphate-dependent transferase n=1 Tax=... [more]
A0A093W114_TALMA5.910e-2569.70Putative 8-amino-7-oxononanoate synthase n=1 Tax=T... [more]
A0A1Q5QBQ8_9EURO7.190e-2570.59Aminotran_1_2 domain-containing protein n=1 Tax=Ta... [more]
B6Q7A3_TALMQ2.100e-2469.70Aminotransferase, putative n=3 Tax=Talaromyces mar... [more]
A0A8H4WNQ2_9HYPO2.120e-2471.64Aminotran_1_2 domain-containing protein n=1 Tax=Fu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8022contigEcto-sp13_S_contig8022:6898..7110 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeFungi
Stop0
Start0
Seed ortholog score105.9
Seed ortholog evalue7.8e-21
Seed eggNOG ortholog28564.XP_002479457.1
Model size213
KEGG rclassRC00004,RC00039,RC02725
KEGG koko:K00652
KEGG ReactionR03210,R10124
KEGG Pathwayko00780,ko01100,map00780,map01100
KEGG ModuleM00123,M00573,M00577
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.Aminotransferase class I and II
EggNOG OGs20BU4@147545,38CCT@33154,3NVVS@4751,3QR5N@4890,3S3AR@5042,COG0156@1,KOG1359@2759
EC2.3.1.47
Cds size213
COG Functional cat.E
Best tax levelEurotiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464075.284241-CDS-Ecto-sp13_S_contig8022:6897..71101681464075.284241-CDS-Ecto-sp13_S_contig8022:6897..7110Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8022 6898..7110 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8022.19342.1prot_Ecto-sp13_S_contig8022.19342.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8022 6898..7110 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8022.19342.1

>prot_Ecto-sp13_S_contig8022.19342.1 ID=prot_Ecto-sp13_S_contig8022.19342.1|Name=mRNA_Ecto-sp13_S_contig8022.19342.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=71bp
DGFPIVGSGGSRLLSGNSRYAEELEGWIARFHGRPAALLFNSGYDANLGL
MSCLPQPGDVVVCDELVHNSV
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mRNA from alignment at Ecto-sp13_S_contig8022:6898..7110+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8022.19342.1 ID=mRNA_Ecto-sp13_S_contig8022.19342.1|Name=mRNA_Ecto-sp13_S_contig8022.19342.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8022:6898..7110+ (Ectocarpus species13 EcNAP12_S_4_19m)
GACGGTTTTCCCATCGTCGGGTCGGGAGGGTCTAGGCTGCTGTCGGGCAA CTCCCGGTACGCCGAGGAGCTGGAGGGGTGGATCGCTCGCTTCCACGGGC GGCCCGCGGCCTTGCTCTTCAACTCTGGGTACGACGCTAACTTGGGGCTC ATGTCGTGCCTCCCGCAGCCCGGCGATGTCGTGGTCTGCGACGAGCTTGT CCACAACTCTGTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8022:6898..7110+

>mRNA_Ecto-sp13_S_contig8022.19342.1 ID=mRNA_Ecto-sp13_S_contig8022.19342.1|Name=mRNA_Ecto-sp13_S_contig8022.19342.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8022:6898..7110+ (Ectocarpus species13 EcNAP12_S_4_19m)
GACGGTTTTCCCATCGTCGGGTCGGGAGGGTCTAGGCTGCTGTCGGGCAA
CTCCCGGTACGCCGAGGAGCTGGAGGGGTGGATCGCTCGCTTCCACGGGC
GGCCCGCGGCCTTGCTCTTCAACTCTGGGTACGACGCTAACTTGGGGCTC
ATGTCGTGCCTCCCGCAGCCCGGCGATGTCGTGGTCTGCGACGAGCTTGT
CCACAACTCTGTC
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