prot_Ecto-sp13_S_contig80206.19341.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80206.19341.1
Unique Nameprot_Ecto-sp13_S_contig80206.19341.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length39
Homology
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BLAST of mRNA_Ecto-sp13_S_contig80206.19341.1 vs. uniprot
Match: A0A6H5L1C1_9PHAE (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1C1_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 7.370e-13
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 0 
Query:    1 IDRFTVPTLKTFLKSRGMSATGKKGDLVARVRQALQ 36
            IDRFTVPTLK+FLKSRGMSATGKKGDLVARV+QALQ
Sbjct:  590 IDRFTVPTLKSFLKSRGMSATGKKGDLVARVQQALQ 625
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80206.19341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1C1_9PHAE7.370e-1394.44SAP domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 1..35
e-value: 3.4E-5
score: 33.3
IPR003034SAP domainPFAMPF02037SAPcoord: 3..35
e-value: 5.6E-11
score: 41.9
IPR003034SAP domainPROSITEPS50800SAPcoord: 1..35
score: 10.585
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 1..38
e-value: 2.0E-9
score: 38.9
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 2..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80206contigEcto-sp13_S_contig80206:99..215 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80206.19341.1mRNA_Ecto-sp13_S_contig80206.19341.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80206 99..215 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80206.19341.1 ID=prot_Ecto-sp13_S_contig80206.19341.1|Name=mRNA_Ecto-sp13_S_contig80206.19341.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=39bp
IDRFTVPTLKTFLKSRGMSATGKKGDLVARVRQALQTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf