mRNA_Ecto-sp13_S_contig12307.1934.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12307.1934.1
Unique NamemRNA_Ecto-sp13_S_contig12307.1934.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: A0A6H5KAP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAP4_9PHAE)

HSP 1 Score: 504 bits (1299), Expect = 1.480e-173
Identity = 264/271 (97.42%), Postives = 267/271 (98.52%), Query Frame = 1
Query:  205 TSVRRCLAKIGIDPAGSELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDYDYSSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLVQADGDGGGGSGGILEACVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNWASLQGRRRVRAADVGTASSSSGRG 1017
            TSVRRCLAKIGIDPAG ELTRCASLTEEFTAIKKAYFKKIL+VHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDYDY+SXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGL QADGDGG GSGGILEACVAALSGMNEVQFTGFNDLSPH+QRQVAAHAADKSNWASLQGRRRVRAADVGTASSS GRG
Sbjct:   23 TSVRRCLAKIGIDPAGPELTRCASLTEEFTAIKKAYFKKILMVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDYDYNSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLAQADGDGGXGSGGILEACVAALSGMNEVQFTGFNDLSPHDQRQVAAHAADKSNWASLQGRRRVRAADVGTASSS-GRG 292          
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: A0A8J9S269_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S269_PHATR)

HSP 1 Score: 200 bits (508), Expect = 7.660e-58
Identity = 107/259 (41.31%), Postives = 158/259 (61.00%), Query Frame = 1
Query:  208 SVRRCLAKIGIDPAGSELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDY--DYSSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLVQADGDGGGGSGGILEA--CVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNWASLQGRRRV 972
            +V +CL  IG+ P  ++LT C SL +EF  IK+ YFKKILV HPDKGGDA  FR+V +S+E++R +YE  A+ SF+  +  + Q+  D   D+             +PS     W+YY++AA E  P Y+VE ARS RS+CTQ T+  ++C D+  LI  G +R+GSLD ++G+Y RW HL+CWRVPSRIW+G+  +  D       +L     + +L  MN+V  +G N+++   Q +   H  D+S+WA +  RR +
Sbjct:    4 TVLQCLKIIGVLP--TDLTSCDSLQQEFVNIKRVYFKKILVCHPDKGGDAEVFRNVQTSFEVLRGIYEKEAISSFITESAFSAQNFDDVFRDFGEMP---------TPS-----WEYYHEAAEENFPLYRVERARSNRSRCTQTTKLGKKCGDD-KLIASGSVRVGSLDEKTGTYTRWNHLECWRVPSRIWLGIASSRED----EDSVLNTKNVLQSLLQMNDVLLSGINEMNVEGQMEFVTHIMDRSSWARISQRRNI 241          
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: B7FQ65_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ65_PHATC)

HSP 1 Score: 198 bits (504), Expect = 1.170e-54
Identity = 106/259 (40.93%), Postives = 157/259 (60.62%), Query Frame = 1
Query:  208 SVRRCLAKIGIDPAGSELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDY--DYSSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLVQADGDGGGGSGGILEA--CVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNWASLQGRRRV 972
            +V +CL  IG+    ++LT C SL +EF  IK+ YFKKILV HPDKGGDA  FR+V +S+E++R +YE  A+ SF+  +  + Q+  D   D+             +PS     W+YY++AA E  P Y+VE ARS RS+CTQ T+  ++C D+  LI  G +R+GSLD ++G+Y RW HL+CWRVPSRIW+G+  +  D       +L     + +L  MN+V  +G N+++   Q +   H  D+S+WA +  RR +
Sbjct:    4 TVLQCLKIIGV--LSTDLTSCDSLQQEFVNIKRVYFKKILVCHPDKGGDAEVFRNVQTSFEVLRGIYEKEAISSFITESAFSAQNFDDVFRDFGEMP---------TPS-----WEYYHEAAEENFPLYRVERARSNRSRCTQTTKLGKKCGDD-KLIASGSVRVGSLDEKTGTYTRWNHLECWRVPSRIWLGIASSRED----EDSVLNTKNVLQSLLQMNDVLLSGINEMNVEGQMEFVTHIMDRSSWARISQRRNI 241          
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: A0A7S0N4Q4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N4Q4_9CHLO)

HSP 1 Score: 195 bits (496), Expect = 4.640e-54
Identity = 106/250 (42.40%), Postives = 147/250 (58.80%), Query Frame = 1
Query:  211 VRRCLAKIGIDPAGSELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDYDYSSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGL----VQADGDGGGGSGGILEACVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNWA 948
            V  CL  IG+D     L  C SL +E+ AIKK YFK ILV HPDKGGD A FRD+ +++E++R+LYE +++ SF A++   T   Y +                  T    W+YY  AA EEVP Y+VELA+S RS CTQ T+  ++C D+  +I KG +RIG L+ +SG+Y  WVHL+CWRVP ++WMGL    V +D           +   AAL GM+EV  +G  +L P  + +   +A D++NWA
Sbjct:   16 VHSCLVTIGVDLG--VLAACTSLDDEWKAIKKQYFKIILVQHPDKGGDPAIFRDIQTAFEVLRELYEKQSIKSFAASSTQATASAYAHAREGFQ-----------GTATPSWEYYQTAAEEEVPEYRVELAKSNRSACTQSTKIGKKCGDD-VMIEKGAVRIGVLNKESGTYTFWVHLRCWRVPQKVWMGLPDPAVVSD----------PKRFEAALVGMSEVLLSGVGELPPSSRAEFVLYAMDQTNWA 241          
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: A0A1Y2C5I7_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C5I7_9FUNG)

HSP 1 Score: 184 bits (467), Expect = 3.130e-50
Identity = 106/250 (42.40%), Postives = 145/250 (58.00%), Query Frame = 1
Query:  205 TSVRRCLAKIGIDPAGSELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAA--ESTTQDRYDYDYSSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLVQADGDGGGGSGGILEACVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNWA 948
            T+V  CL+ +G+  A   L    ++  EF AI+KAYFK +L+ HPDKGG+A  FR VN ++E +R ++ ++   SF +AA  E+    R      S           +      P+++Y  AA E VP YKVELA+SGRS+C Q T SAR C+   P I K  IR+GSLD +SG+Y RW+HL CWRVP +IW G+   D      +G    + V A+S MNEV F GFN LS  +Q ++  H  DK +WA
Sbjct:    2 TNVTACLSTLGLTAAS--LAGIPTIEAEFFAIRKAYFKLVLIHHPDKGGNADVFRAVNEAFEALRHMFAEKLCASFFSAATAEAAAPPR-----QSSRPSQRPRAAPTSRAPPKPFEFYRAAAEELVPQYKVELAKSGRSQC-QTTISARPCSAN-PFIAKDSIRVGSLDYESGTYSRWIHLDCWRVPQKIWQGVPDPD------TGKDPSSFVEAISSMNEVLFCGFNRLSHVDQAKIVVHIMDKRHWA 236          
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: A0A7S4RCS8_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RCS8_9DINO)

HSP 1 Score: 183 bits (465), Expect = 5.440e-50
Identity = 105/246 (42.68%), Postives = 142/246 (57.72%), Query Frame = 1
Query:  208 SVRRCLAKIGIDPAGSELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDYDYSSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLVQADGDGGGGSGGILEACVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNW 945
            ++R CLA IG+  AG  L    SL EE+  +KKAYFKKIL  HPDKGGD A FR+V +S+E++RK+++  A+ SFV   + +T D Y                 +PS     W+YY +AA E   PY+VELARSGRS+C  R    ++C  + P I KG +R+G +   +G YG WVHL+CWRVPSRIW+GL   D           +    AL  MNEV   G  DL    +++VA +  DK++W
Sbjct:   32 TIRDCLAAIGMPLAG--LNSSGSLNEEWQLVKKAYFKKILTCHPDKGGDPAVFREVQTSFEVLRKVFDASAIRSFVEELDRSTADLY------RGTKEDLKGASTPS-----WEYYAEAAKEVRAPYRVELARSGRSRCQARG-GRKQCGQDPPFIEKGGLRVGFM-LDTGGYGLWVHLECWRVPSRIWLGLPNPD------KIRDRKQFERALLRMNEVSLCGMPDLEAAARKKVARYVMDKTHW 256          
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: A0A7R9U123_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9U123_9VIRI)

HSP 1 Score: 179 bits (454), Expect = 2.470e-48
Identity = 108/258 (41.86%), Postives = 143/258 (55.43%), Query Frame = 1
Query:  208 SVRRCLAKIGIDPAGSELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDYDYSSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLVQADGDGGGGSGGILEACVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNWASLQGRRRVRAA 981
            +V  CLA+ G+  A SEL  C  L  E+  +K+ YFKKIL  HPDKGGD AEFR   +S+E++R+LYE +AV SF  AA++ T D Y     S           S       W YY  AA E VP + VE A+SGRS C             G  I KG +R+G+LD Q+GSY RWV L  WRVPS++W+GL   D      +   + A   AL  M+ V  +GF +L   ++R+VA H  D+ +WA L  +R+V AA
Sbjct:   24 TVSACLARCGVADA-SELAECDGLDAEWRRVKRVYFKKILKEHPDKGGDVAEFRATQASFEVLRELYETKAVSSFAEAADAPTADAY----GSAAAAARGFEVRS-------WDYYASAADEPVPRHHVERAKSGRSSCRA----------TGVTIEKGALRVGALDPQAGSYSRWVLLSSWRVPSKVWLGLPDPD------TVTDVAAFEEALLAMSSVVLSGFAELREGDKREVARHTMDRKHWARLY-KRKVTAA 252          
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: A0A7S3BUU0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BUU0_9VIRI)

HSP 1 Score: 177 bits (449), Expect = 1.930e-47
Identity = 97/248 (39.11%), Postives = 142/248 (57.26%), Query Frame = 1
Query:  205 TSVRRCLAKIGIDPAGSELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDYDYSSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLVQADGDGGGGSGGILEACVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNWA 948
            ++V  CL ++G+  A + L  C +L EEF  IKK+YFKKIL  HPDKGGD   F+   +++E++R+++E ++V SF ++A  +T D ++    +              T    W++Y  AA E +P Y+VELA+SGRSKC +           G LI KG +R+GSLD Q+G Y +W  L  WRVPS++W+GL   D          + A V AL+ MNEV F G  +L    +R VA HA ++ +WA
Sbjct:   39 STVAGCLKQVGVTDAAA-LDACGNLEEEFKVIKKSYFKKILREHPDKGGDEEVFKKTQAAFEVLREMFEGQSVGSFASSAGDSTADVFEQATRAYAH-----------TDRPSWEFYAAAAEETMPSYRVELAKSGRSKCKK----------TGELIPKGAVRVGSLDQQAGGYSKWNLLSSWRVPSKVWLGLPNPD------ECQDVGAFVEALTKMNEVLFCGMEELPEEARRDVAMHAMERKHWA 258          
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: A0A507FPK0_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FPK0_9FUNG)

HSP 1 Score: 176 bits (445), Expect = 7.570e-46
Identity = 101/257 (39.30%), Postives = 140/257 (54.47%), Query Frame = 1
Query:  220 CLAKIGIDPAGSELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDYDYSSXXXXXXXXXXXSPSTTH-----MPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEG---------PLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLVQADGDGGGGSGGILEACVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNWA 948
            C+ ++G+  A  EL RC S+  E+  +K  YFK +L VHPDKGGDAA FR VN+++  +R+LYE RA+ SF        +    Y  +              + TH       + +Y +AA E VP YK E ARS RS C +   S+RR + +          PLI KG +R+G+L+ +SG+Y RW HL CWRVP ++W GL +   +             AAL+ MNE+ F GF DLSP E+ Q+  H  DKS+WA
Sbjct:   10 CMRQLGVTAA--ELDRCDSVESEWNVVKSKYFKLVLRVHPDKGGDAATFRLVNNAFNRLRELYEARAIASFAQLLSPKFKPTTAYTNTKPQ-----------TNTHSTPFAFSFSFYAEAAEESVPLYKCEPARSSRSSCIRCANSSRRRSSKSQPQSQIKLNPLIPKGSLRVGALNPESGTYSRWSHLSCWRVPFKVWNGLPENSTN--------PADFEAALAAMNEILFCGFCDLSPDEKAQLVDHVMDKSSWA 245          
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Match: A0A8J6C7Q5_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C7Q5_DIALT)

HSP 1 Score: 172 bits (436), Expect = 8.140e-46
Identity = 90/233 (38.63%), Postives = 136/233 (58.37%), Query Frame = 1
Query:  256 ELTRCASLTEEFTAIKKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAESTTQDRYDYDYSSXXXXXXXXXXXSPSTTHMPWQYYYDAAAEEVPPYKVELARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKCWRVPSRIWMGLVQADGDGGGGSGGILEACVAALSGMNEVQFTGFNDLSPHEQRQVAAHAADKSNWASL 954
            +++  A + +EF AIKKA+F++ L  HPDKGGDAAEFR V+ ++ ++R+L+E   + SF   A+   +  +D D  +            P  T   W++Y       +PPY+VE+AR+GRS C Q+  S R+C++    I +GE RIG +   +G YGRW HL+CWRVPS++++GL   +           +   AAL GM+E+   GF +L P ++R V  HA +K NWA L
Sbjct:    8 DISGFALVDDEFRAIKKAFFQRALDTHPDKGGDAAEFRKVSYAFNVMRELFEAHEIESFARDADRPVKPAHDEDAEAG----------EPGPTFS-WEFYATVEKSTIPPYRVEIARTGRSACNQQG-SRRKCSEGRQFIKQGEPRIGWMQETTGDYGRWCHLECWRVPSKVYLGLPDPET-------ASEDEVEAALMGMDEIAMCGFAELPPDKRRLVTRHAMNKENWAKL 221          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12307.1934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAP4_9PHAE1.480e-17397.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J9S269_PHATR7.660e-5841.31Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
B7FQ65_PHATC1.170e-5440.93Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S0N4Q4_9CHLO4.640e-5442.40Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A1Y2C5I7_9FUNG3.130e-5042.40Uncharacterized protein (Fragment) n=1 Tax=Rhizocl... [more]
A0A7S4RCS8_9DINO5.440e-5042.68Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7R9U123_9VIRI2.470e-4841.86Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S3BUU0_9VIRI1.930e-4739.11Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A507FPK0_9FUNG7.570e-4639.30Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
A0A8J6C7Q5_DIALT8.140e-4638.63Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12307contigEcto-sp13_S_contig12307:406..1499 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score200.3
Seed ortholog evalue1.5e-48
Seed eggNOG ortholog2850.Phatr42968
Model size1079
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.breast cancer carboxy-terminal domain
EggNOG OGs2B23P@1,2S0BW@2759,2XD9I@2836
Cds size1077
COG Functional cat.L
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462655.3091593-CDS-Ecto-sp13_S_contig12307:405..14471681462655.3091593-CDS-Ecto-sp13_S_contig12307:405..1447Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12307 406..1447 +
1681462655.320323-CDS-Ecto-sp13_S_contig12307:1463..14981681462655.320323-CDS-Ecto-sp13_S_contig12307:1463..1498Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12307 1464..1498 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12307.1934.1prot_Ecto-sp13_S_contig12307.1934.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12307 406..1498 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12307.1934.1

>prot_Ecto-sp13_S_contig12307.1934.1 ID=prot_Ecto-sp13_S_contig12307.1934.1|Name=mRNA_Ecto-sp13_S_contig12307.1934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp
GKLRIERARVTFSNNTPTGPFLCVLRAHATPNERSSLNTATPPPPPMSYS
DSDSDSDYDGGNGSGGTSTSVRRCLAKIGIDPAGSELTRCASLTEEFTAI
KKAYFKKILVVHPDKGGDAAEFRDVNSSWELIRKLYEDRAVPSFVAAAES
TTQDRYDYDYSSNGGGGGAARSASPSTTHMPWQYYYDAAAEEVPPYKVEL
ARSGRSKCTQRTQSARRCADEGPLIGKGEIRIGSLDAQSGSYGRWVHLKC
WRVPSRIWMGLVQADGDGGGGSGGILEACVAALSGMNEVQFTGFNDLSPH
EQRQVAAHAADKSNWASLQGRRRVRAADVGTASSSSGRGSSAGAGGATAA
VAALRRTPR
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mRNA from alignment at Ecto-sp13_S_contig12307:406..1499+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12307.1934.1 ID=mRNA_Ecto-sp13_S_contig12307.1934.1|Name=mRNA_Ecto-sp13_S_contig12307.1934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1094bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12307:406..1499+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCAAGCTTCGGATTGAACGCGCACGCGTTACGTTCTCCAACAACACACC AACAGGACCCTTCCTCTGCGTCTTGAGAGCACACGCCACCCCCAACGAGC GCTCATCTCTCAACACCGCCACACCACCACCACCGCCGATGTCCTATTCG GACTCGGACTCGGACTCGGACTACGATGGCGGCAACGGCAGCGGCGGCAC GTCCACGTCGGTGCGGCGGTGCCTCGCCAAGATCGGGATCGACCCCGCCG GGTCCGAACTGACGCGCTGCGCGAGCCTCACGGAGGAGTTCACGGCCATC AAGAAGGCCTACTTCAAGAAGATCCTGGTGGTCCACCCAGACAAGGGCGG CGACGCGGCCGAGTTCCGCGACGTCAACTCCTCGTGGGAGCTCATCCGCA AGCTCTACGAGGACCGCGCAGTACCGTCGTTCGTGGCCGCCGCGGAGTCA ACGACACAGGACAGGTACGACTACGACTACAGTAGCAATGGCGGCGGTGG CGGCGCTGCTAGGTCTGCGTCCCCATCGACCACCCACATGCCCTGGCAGT ACTACTACGACGCGGCGGCGGAGGAGGTGCCCCCGTACAAGGTGGAGCTG GCCAGGTCCGGCCGGAGCAAGTGCACCCAGCGCACCCAGTCGGCGCGGCG GTGCGCCGACGAGGGGCCGCTCATCGGGAAGGGGGAGATCCGCATCGGCT CCCTCGACGCGCAGTCCGGGTCGTACGGCCGCTGGGTCCACCTCAAGTGC TGGCGCGTCCCCAGCCGGATCTGGATGGGGCTCGTGCAAGCCGACGGGGA TGGCGGTGGCGGCAGCGGCGGCATCCTGGAGGCGTGCGTCGCCGCCCTCT CAGGCATGAACGAGGTGCAGTTCACCGGATTCAACGATCTTTCCCCCCAC GAACAGCGGCAGGTCGCGGCCCACGCCGCGGACAAGAGCAACTGGGCGAG CCTCCAGGGCAGGAGGAGGGTCCGCGCTGCGGACGTCGGCACCGCCTCCT CCTCCTCCGGCCGCGGCAGCAGCGCCGGAGCAGGCGGTGCCAGCAGCGGC GGCGGCAGCAGCGGCAGTGGCAGCGCTCCGGCGTACGCCGCGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12307:406..1499+

>mRNA_Ecto-sp13_S_contig12307.1934.1 ID=mRNA_Ecto-sp13_S_contig12307.1934.1|Name=mRNA_Ecto-sp13_S_contig12307.1934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12307:406..1499+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCAAGCTTCGGATTGAACGCGCACGCGTTACGTTCTCCAACAACACACC
AACAGGACCCTTCCTCTGCGTCTTGAGAGCACACGCCACCCCCAACGAGC
GCTCATCTCTCAACACCGCCACACCACCACCACCGCCGATGTCCTATTCG
GACTCGGACTCGGACTCGGACTACGATGGCGGCAACGGCAGCGGCGGCAC
GTCCACGTCGGTGCGGCGGTGCCTCGCCAAGATCGGGATCGACCCCGCCG
GGTCCGAACTGACGCGCTGCGCGAGCCTCACGGAGGAGTTCACGGCCATC
AAGAAGGCCTACTTCAAGAAGATCCTGGTGGTCCACCCAGACAAGGGCGG
CGACGCGGCCGAGTTCCGCGACGTCAACTCCTCGTGGGAGCTCATCCGCA
AGCTCTACGAGGACCGCGCAGTACCGTCGTTCGTGGCCGCCGCGGAGTCA
ACGACACAGGACAGGTACGACTACGACTACAGTAGCAATGGCGGCGGTGG
CGGCGCTGCTAGGTCTGCGTCCCCATCGACCACCCACATGCCCTGGCAGT
ACTACTACGACGCGGCGGCGGAGGAGGTGCCCCCGTACAAGGTGGAGCTG
GCCAGGTCCGGCCGGAGCAAGTGCACCCAGCGCACCCAGTCGGCGCGGCG
GTGCGCCGACGAGGGGCCGCTCATCGGGAAGGGGGAGATCCGCATCGGCT
CCCTCGACGCGCAGTCCGGGTCGTACGGCCGCTGGGTCCACCTCAAGTGC
TGGCGCGTCCCCAGCCGGATCTGGATGGGGCTCGTGCAAGCCGACGGGGA
TGGCGGTGGCGGCAGCGGCGGCATCCTGGAGGCGTGCGTCGCCGCCCTCT
CAGGCATGAACGAGGTGCAGTTCACCGGATTCAACGATCTTTCCCCCCAC
GAACAGCGGCAGGTCGCGGCCCACGCCGCGGACAAGAGCAACTGGGCGAG
CCTCCAGGGCAGGAGGAGGGTCCGCGCTGCGGACGTCGGCACCGCCTCCT
CCTCCTCCGGCCGCGGCAGCAGCGCCGGAGCAGGCGGTGCCACAGCGGCA
GTGGCAGCGCTCCGGCGTACGCCGCGG
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