prot_Ecto-sp13_S_contig8016.19335.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8016.19335.1
Unique Nameprot_Ecto-sp13_S_contig8016.19335.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length170
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8016.19335.1 vs. uniprot
Match: D7FI79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI79_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 3.190e-61
Identity = 132/165 (80.00%), Postives = 134/165 (81.21%), Query Frame = 0 
Query:    1 GAGGSVVGLLTLGTAEEAVESRVRRGLLGEALDLATACGLDAGGVRAGLWRRAVEGGSFSEDDVRQHLAGVSDHRWVVKEALARIGLAATEPAASAILGEGLRRCDFLLPTDSRGERSSSEEQSXXXXXXXEAAEERPTASGGDGWDFDDDAXXXXDSGDAPRAA 165
            GAGGSVVGLLTLGTAEEAVESRVRRGLLGEALDLATACGLDAG VRAGLWRRAVE GSFSEDDV+QHLAGVSDHRWVVKEALA IGLAATE AA+AIL EGLRRCDFLLP  S G  SSS    XXXXXXX            DGWDFD   XXX D GDAPRAA
Sbjct:  581 GAGGSVVGLLTLGTAEEAVESRVRRGLLGEALDLATACGLDAGSVRAGLWRRAVERGSFSEDDVQQHLAGVSDHRWVVKEALAGIGLAATESAAAAILAEGLRRCDFLLPAHSTGWGSSSXXXXXXXXXXXXXXXXXXXXXXXDGWDFDXXXXXXGDLGDAPRAA 745
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BLAST of mRNA_Ecto-sp13_S_contig8016.19335.1 vs. uniprot
Match: A0A6H5JI52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI52_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 2.460e-25
Identity = 70/92 (76.09%), Postives = 71/92 (77.17%), Query Frame = 0 
Query:   73 DHRWVVKEALARIGLAATEPAASAILGEGLRRCDFLLPTDSRGERSSSEEQSXXXXXXXEAAEERPTASGGDGWDFDDDAXXXXDSGDAPRA 164
            D RWVVKEALA IGLAATEPAASAIL EGLRRCDFLLP  SRG  SS     XXXXXXX  A+ERPTASGGDGWDF DDA    D  DAPRA
Sbjct:   33 DARWVVKEALAGIGLAATEPAASAILAEGLRRCDFLLPAHSRGWGSSXXXXXXXXXXXXXPAKERPTASGGDGWDFADDADDDGDVRDAPRA 124
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8016.19335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI79_ECTSI3.190e-6180.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI52_9PHAE2.460e-2576.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8016contigEcto-sp13_S_contig8016:2126..4883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8016.19335.1mRNA_Ecto-sp13_S_contig8016.19335.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8016 2124..4883 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8016.19335.1 ID=prot_Ecto-sp13_S_contig8016.19335.1|Name=mRNA_Ecto-sp13_S_contig8016.19335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=170bp
GAGGSVVGLLTLGTAEEAVESRVRRGLLGEALDLATACGLDAGGVRAGLW
RRAVEGGSFSEDDVRQHLAGVSDHRWVVKEALARIGLAATEPAASAILGE
GLRRCDFLLPTDSRGERSSSEEQSADAAGGGEAAEERPTASGGDGWDFDD
DADDDGDSGDAPRAATAAPG
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