mRNA_Ecto-sp13_S_contig8010.19331.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: D7FZ85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ85_ECTSI) HSP 1 Score: 152 bits (385), Expect = 7.180e-44 Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 1
Query: 1 DRQDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEIVE 231
DRQDEMFVPLTS SDPNYEHRRTY+EEMVKDGVAEEDVKKIA+LMHTGAPQDELERAVVNGVNRRFFG+DIPA+IVE
Sbjct: 75 DRQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVE 151
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: A0A355DRG2_9CYAN (Uncharacterized protein n=1 Tax=Cyanobacteria bacterium UBA11162 TaxID=2055781 RepID=A0A355DRG2_9CYAN) HSP 1 Score: 76.6 bits (187), Expect = 6.220e-15 Identity = 37/77 (48.05%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 DRQDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEIVE 231
D +D F PL SAS+P Y RR Y+EE V + ++EDVK+IA L+ T A + L +V VNRRFFG++IP I +
Sbjct: 67 DERDLWFCPLESASNPTYRPRRAYLEEKVAESYSQEDVKRIAELLKTNASDEVLTHEMVQVVNRRFFGKEIPLSITK 143
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: UPI0016862D4D (hypothetical protein n=1 Tax=Calothrix membranacea TaxID=212352 RepID=UPI0016862D4D) HSP 1 Score: 75.1 bits (183), Expect = 2.300e-14 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 4 RQDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEI 225
++D F P S+++P Y RR Y+EE V +EDVKKIA L+ T A + L A+V VNRRFFG+DIPAEI
Sbjct: 66 QRDLWFCPFESSTNPTYHPRRAYLEEKVAISYQQEDVKKIADLLRTDASDEVLADAMVQIVNRRFFGQDIPAEI 139
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: A0A1D2P8J3_9CYAN (Uncharacterized protein n=1 Tax=Scytonema millei VB511283 TaxID=1245923 RepID=A0A1D2P8J3_9CYAN) HSP 1 Score: 75.1 bits (183), Expect = 2.370e-14 Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 1 DRQDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEIVE 231
D +D F P S S PNYE RR Y+EE V G +DVK+IA L+ T A + L A+V VNRRFFG +IP I +
Sbjct: 67 DERDLWFFPFESTSCPNYESRRAYLEEKVAIGYNRDDVKRIAELLKTNASDEVLAHAMVQVVNRRFFGEEIPLPITQ 143
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: UPI00139143D8 (hypothetical protein n=1 Tax=Nostoc sp. B(2019) TaxID=2690446 RepID=UPI00139143D8) HSP 1 Score: 73.9 bits (180), Expect = 6.400e-14 Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 1 DRQDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEIVE 231
D +D F P S++DP Y R+TY+EE V +EDVKKIA L+ A + L +V VNRRFFG D+P EI +
Sbjct: 66 DERDLWFCPFESSADPTYYPRKTYLEEKVAISYTQEDVKKIAELLRINASDEVLAYEMVQVVNRRFFGEDVPTEITD 142
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: UPI001CFDFF82 (hypothetical protein n=1 Tax=Microseira wollei TaxID=467598 RepID=UPI001CFDFF82) HSP 1 Score: 70.9 bits (172), Expect = 2.850e-13 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 1 DRQDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEIVE 231
D++D F P S ++P Y+ RR Y+EE V ++EDVK IA L+ A + L A+V VNRRFFG +IP I +
Sbjct: 67 DKRDLWFCPFESTANPTYQPRRAYLEEKVATSYSQEDVKTIAELLKNNAADEVLAHAMVQVVNRRFFGEEIPLHITK 143
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: A0A0P4UME5_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya sp. NIES-2104 TaxID=1552121 RepID=A0A0P4UME5_9CYAN) HSP 1 Score: 70.1 bits (170), Expect = 1.650e-12 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 7 QDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEIVE 231
+D F P S S+P Y RR Y+E +G ++ED+++IA L+ T A D L A+V VNRRFFG ++P I +
Sbjct: 68 RDLWFCPFESTSNPTYSPRRAYLEAKSAEGYSQEDIQQIAELLRTNADDDTLAHAMVQVVNRRFFGEEVPNSITQ 142
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: A0A8J6XL69_9CYAN (Uncharacterized protein n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J6XL69_9CYAN) HSP 1 Score: 69.3 bits (168), Expect = 5.200e-12 Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 1 DRQDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEIVE 231
D +D F P S+P+Y+ RR Y+EE V G +EDV+ IA L+ T A + L +V VN RFFG++IP I +
Sbjct: 711 DERDLWFCPFEPTSNPSYQPRRAYLEEKVATGYTQEDVQSIAELLRTNASDEVLAHEMVQVVNHRFFGKEIPLAITK 787
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: A0A351L9G3_9CYAN (Uncharacterized protein n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A351L9G3_9CYAN) HSP 1 Score: 68.6 bits (166), Expect = 6.190e-12 Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 1 DRQDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEIVE 231
D++D F P S ++P Y+ RR Y+EE V ++EDVK IA L+ A + L A+V VN+RFFG +IP I +
Sbjct: 67 DKRDLWFCPFESTANPTYQPRRAYLEEKVATSYSQEDVKTIAELLINNASDEVLAHAMVQVVNQRFFGEEIPLHITK 143
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Match: A0A537J0T1_9BACT (Uncharacterized protein n=1 Tax=Terrabacteria group bacterium ANGP1 TaxID=2569760 RepID=A0A537J0T1_9BACT) HSP 1 Score: 67.8 bits (164), Expect = 1.080e-11 Identity = 30/77 (38.96%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 1 DRQDEMFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELERAVVNGVNRRFFGRDIPAEIVE 231
+ +D F+P SA+DP+Y+ R Y+ + V G + DV+++A L+ A +D L +V VNRRFFG +IP I +
Sbjct: 49 EERDLWFLPFESAADPSYKPRLAYLHQKVSTGYTQADVQRVALLLQANADEDVLAYEMVQVVNRRFFGEEIPRSITD 125 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8010.19331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8010.19331.1 >prot_Ecto-sp13_S_contig8010.19331.1 ID=prot_Ecto-sp13_S_contig8010.19331.1|Name=mRNA_Ecto-sp13_S_contig8010.19331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=72bp MFVPLTSASDPNYEHRRTYIEEMVKDGVAEEDVKKIAFLMHTGAPQDELEback to top mRNA from alignment at Ecto-sp13_S_contig8010:1615..2869- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8010.19331.1 ID=mRNA_Ecto-sp13_S_contig8010.19331.1|Name=mRNA_Ecto-sp13_S_contig8010.19331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1255bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8010:1615..2869- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8010:1615..2869- >mRNA_Ecto-sp13_S_contig8010.19331.1 ID=mRNA_Ecto-sp13_S_contig8010.19331.1|Name=mRNA_Ecto-sp13_S_contig8010.19331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=216bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8010:1615..2869- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |