prot_Ecto-sp13_S_contig8005.19324.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8005.19324.1
Unique Nameprot_Ecto-sp13_S_contig8005.19324.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length63
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8005.19324.1 vs. uniprot
Match: D7FIG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG0_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 2.170e-30
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0 
Query:    1 VFQVKNASRIPAIFRIDTPKGSSGVIRVSPMAGLLLGNQTKALQVVFAPRETKGYRFKLPIKV 63
            V +VKNASRIPAIFRIDTPKGSSGV+RVSPMAGLLLGNQTKALQVVFAPRETKGYRFKLPIKV
Sbjct:  901 VVKVKNASRIPAIFRIDTPKGSSGVVRVSPMAGLLLGNQTKALQVVFAPRETKGYRFKLPIKV 963
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8005.19324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIG0_ECTSI2.170e-3095.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..63
e-value: 2.3E-8
score: 36.1
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 1..63
score: 9.073

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8005contigEcto-sp13_S_contig8005:154..342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8005.19324.1mRNA_Ecto-sp13_S_contig8005.19324.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8005 154..342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8005.19324.1 ID=prot_Ecto-sp13_S_contig8005.19324.1|Name=mRNA_Ecto-sp13_S_contig8005.19324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=63bp
VFQVKNASRIPAIFRIDTPKGSSGVIRVSPMAGLLLGNQTKALQVVFAPR
ETKGYRFKLPIKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR000535MSP_dom