prot_Ecto-sp13_S_contig80007.19320.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80007.19320.1
Unique Nameprot_Ecto-sp13_S_contig80007.19320.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length66
Homology
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: D8LRF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF2_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 1.540e-25
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 0
Query:    6 SSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            S  LGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRF Q NSEV
Sbjct:  351 SPFLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFFQSNSEV 406          
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: D8LIC7_ECTSI (Intraflagellar transport protein 80 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIC7_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 2.950e-24
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query:   12 IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV
Sbjct:  696 IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 745          
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: A0A2G8JQ60_STIJA (Putative intraflagellar transport protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JQ60_STIJA)

HSP 1 Score: 77.8 bits (190), Expect = 2.360e-15
Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 SSLSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            +SL   +++  I L+ W RALELAV+HKTHVDTVLGYRQ FL S  K ET+KRFLQF   V
Sbjct:  269 ASLIFRAIMMNISLYNWDRALELAVKHKTHVDTVLGYRQKFLNSFNKVETNKRFLQFAQGV 329          
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: A0A1I7XJL4_HETBA (Uncharacterized protein n=1 Tax=Heterorhabditis bacteriophora TaxID=37862 RepID=A0A1I7XJL4_HETBA)

HSP 1 Score: 72.0 bits (175), Expect = 2.930e-15
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0
Query:   14 LFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            +FRWSRALELAV+HKTH++TV+GYRQ +L   GK+ETD +FL+   EV
Sbjct:    1 MFRWSRALELAVKHKTHIETVIGYRQKYLDQIGKKETDPKFLKHMGEV 48          
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: A0A2G8L758_STIJA (Putative intraflagellar transport protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L758_STIJA)

HSP 1 Score: 77.8 bits (190), Expect = 3.430e-15
Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 SSLSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            +SL   +++  I L+ W RALELAV+HKTHVDTVLGYRQ FL S  K ET+KRFLQF   V
Sbjct:  667 ASLIFRAIMMNISLYNWDRALELAVKHKTHVDTVLGYRQKFLNSFNKVETNKRFLQFAQGV 727          
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: UPI001E1DB922 (intraflagellar transport protein 80 homolog isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB922)

HSP 1 Score: 77.8 bits (190), Expect = 3.430e-15
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 SSLSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            + L+  ++L  I+L+ W RALELAV+HKTHVDTVLGYRQ ++   GK+ET+KRFLQ+   +
Sbjct:  692 AGLTFRAILLNIQLYNWDRALELAVKHKTHVDTVLGYRQKYMTQYGKQETNKRFLQYKEGI 752          
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: A0A7S2CV51_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CV51_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 4.510e-15
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 0
Query:    3 LSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            L+  ++   IRLFRW RALELAV+ ++HVDTVLGYRQ +L   GK+ETDKRFLQ+   V
Sbjct:  191 LTYRAIKMNIRLFRWGRALELAVKSRSHVDTVLGYRQKYLDQFGKKETDKRFLQYAESV 249          
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: A0A0M3JWX0_ANISI (Intraflagellar transport protein 80 homolog (inferred by orthology to a human protein) n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3JWX0_ANISI)

HSP 1 Score: 77.4 bits (189), Expect = 4.680e-15
Identity = 34/55 (61.82%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    7 SLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            +++  I LFRW RALELAVQHK H+DTV+GYRQ +L+ +G++ETDK FLQ  +EV
Sbjct:  647 AIMFNISLFRWQRALELAVQHKMHLDTVIGYRQRYLQQTGRKETDKNFLQHLAEV 701          
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: A0A8C0J507_CHEAB (Intraflagellar transport 80 n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0J507_CHEAB)

HSP 1 Score: 75.9 bits (185), Expect = 5.530e-15
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:   12 IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            I L+ W RALELAV+HKTHVDTVLGYRQ FL+  GK+ET KRFLQ+   V
Sbjct:  186 INLYNWDRALELAVKHKTHVDTVLGYRQKFLEDFGKKETSKRFLQYAEGV 235          
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Match: UPI000359995A (intraflagellar transport protein 80 homolog n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359995A)

HSP 1 Score: 77.0 bits (188), Expect = 6.400e-15
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 SSLSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEV 61
            ++L+  +++  ++L+ W RALELAV+HKTHVDTVLGYRQ FL    KEET+KRFLQ+   +
Sbjct:  684 ATLTFRAIMLNVQLYNWDRALELAVKHKTHVDTVLGYRQKFLARFDKEETNKRFLQYKEGI 744          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80007.19320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRF2_ECTSI1.540e-2592.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIC7_ECTSI2.950e-24100.00Intraflagellar transport protein 80 n=2 Tax=Ectoca... [more]
A0A2G8JQ60_STIJA2.360e-1562.30Putative intraflagellar transport protein n=1 Tax=... [more]
A0A1I7XJL4_HETBA2.930e-1564.58Uncharacterized protein n=1 Tax=Heterorhabditis ba... [more]
A0A2G8L758_STIJA3.430e-1562.30Putative intraflagellar transport protein n=1 Tax=... [more]
UPI001E1DB9223.430e-1555.74intraflagellar transport protein 80 homolog isofor... [more]
A0A7S2CV51_9STRA4.510e-1561.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A0M3JWX0_ANISI4.680e-1561.82Intraflagellar transport protein 80 homolog (infer... [more]
A0A8C0J507_CHEAB5.530e-1570.00Intraflagellar transport 80 n=1 Tax=Chelonoidis ab... [more]
UPI000359995A6.400e-1555.74intraflagellar transport protein 80 homolog n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24098:SF0INTRAFLAGELLAR TRANSPORT 80 HOMOLOG (CHLAMYDOMONAS)coord: 7..61
NoneNo IPR availablePANTHERPTHR24098FAMILY NOT NAMEDcoord: 7..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80007contigEcto-sp13_S_contig80007:418..615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80007.19320.1mRNA_Ecto-sp13_S_contig80007.19320.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80007 418..615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80007.19320.1 ID=prot_Ecto-sp13_S_contig80007.19320.1|Name=mRNA_Ecto-sp13_S_contig80007.19320.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=66bp
SSLSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEET
DKRFLQFNSEVGRWS*
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