prot_Ecto-sp13_S_contig8000.19318.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8000.19318.1
Unique Nameprot_Ecto-sp13_S_contig8000.19318.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length198
Homology
BLAST of mRNA_Ecto-sp13_S_contig8000.19318.1 vs. uniprot
Match: D8LF48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF48_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 2.740e-20
Identity = 58/64 (90.62%), Postives = 59/64 (92.19%), Query Frame = 0
Query:   39 MGGASEDLSSTSAGGTGIGHRGXXXXXXXXXXXXGCDGPGVPRRRRGLSWMAQTCSTAARSFDW 102
            MGGAS DL STSAGGTGIGH+GXXXXXXXXXXXX  DGPGVPRRRRGLSWMAQTCSTA RSFDW
Sbjct:    1 MGGASGDLCSTSAGGTGIGHQGXXXXXXXXXXXXXXDGPGVPRRRRGLSWMAQTCSTATRSFDW 64          
BLAST of mRNA_Ecto-sp13_S_contig8000.19318.1 vs. uniprot
Match: D8LHD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD0_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.580e-12
Identity = 86/210 (40.95%), Postives = 98/210 (46.67%), Query Frame = 0
Query:    7 IGTRLTFVPPSFPTLHDTSTSLRHQLHRKLGGMGG-ASEDLSSTSAGGTGI--GHRGXXXXXXXXXXXXGC--------------DGPGVPRRRRGLSWMAQTCSTAARSFDWSTLSWAGVAAXXXXXXXXXXXSGPRESAGARQPRARWRAPRHLHSRERTGPGGVPAGVRPPLQPP--SLRQGSGGGGGDVDSGMGVIGNSSGHEILT 197
            IGTR+   PPS P LHD ST+ RHQLHRK GGMGG A EDLSST+AGGTG+  G +GXXXXXXXXXXXX                D PG+  R   +S       T    F                       SG     G R   +          +   G GG        L  P  SL+QGSG     VD GMG++GNSSG E LT
Sbjct:   22 IGTRVASAPPSSPALHDASTTQRHQLHRKRGGMGGGAPEDLSSTAAGGTGVSLGRQGXXXXXXXXXXXXXXXXXXXXXXXXXXLPDDPGLQYRSPAVSTNGVLRPTPQEHF----------VVDGRGGGNSSSSSGATRIRGCRSASSAMAGMTSSSQQGEDGNGGGHRLGSVLLDTPGHSLQQGSGXXXXXVDGGMGLMGNSSGDEKLT 221          
BLAST of mRNA_Ecto-sp13_S_contig8000.19318.1 vs. uniprot
Match: D8LHJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ2_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 6.450e-8
Identity = 34/61 (55.74%), Postives = 38/61 (62.30%), Query Frame = 0
Query:    1 MWAFYPIGTRLTFVPPSFPTLHDTSTSLRHQLHRKLGGMGGASEDLSSTSA-GGTGIGHRG 60
            MWAFY               LHD S SLRHQLHRKLGGMGG  ED SS +A GG+G+G+ G
Sbjct:  159 MWAFY--RNESDQCAAKLSALHDASASLRHQLHRKLGGMGGVPEDFSSAAAAGGSGVGYEG 217          
BLAST of mRNA_Ecto-sp13_S_contig8000.19318.1 vs. uniprot
Match: A0A6H5KJQ4_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ4_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 2.680e-5
Identity = 28/48 (58.33%), Postives = 28/48 (58.33%), Query Frame = 0
Query:    1 MWAFYPIGTRLTFVPPSFPTLHDTSTSLRHQLHRKLGGMGGASEDLSS 48
            MWAFY               LHD S SLRHQLHRKLGGMGG  ED SS
Sbjct:    1 MWAFY--RNESDQCAAKLSALHDASASLRHQLHRKLGGMGGVREDFSS 46          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8000.19318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF48_ECTSI2.740e-2090.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHD0_ECTSI1.580e-1240.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHJ2_ECTSI6.450e-855.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJQ4_9PHAE2.680e-558.33EXS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8000contigEcto-sp13_S_contig8000:912..1902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8000.19318.1mRNA_Ecto-sp13_S_contig8000.19318.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8000 897..6966 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8000.19318.1 ID=prot_Ecto-sp13_S_contig8000.19318.1|Name=mRNA_Ecto-sp13_S_contig8000.19318.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp
MWAFYPIGTRLTFVPPSFPTLHDTSTSLRHQLHRKLGGMGGASEDLSSTS
AGGTGIGHRGGGGGNKSSSRGGGCDGPGVPRRRRGLSWMAQTCSTAARSF
DWSTLSWAGVAAAAAAAAATAAASGPRESAGARQPRARWRAPRHLHSRER
TGPGGVPAGVRPPLQPPSLRQGSGGGGGDVDSGMGVIGNSSGHEILT*
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