prot_Ecto-sp13_S_contig800.19315.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig800.19315.1
Unique Nameprot_Ecto-sp13_S_contig800.19315.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length705
Homology
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 1204 bits (3114), Expect = 0.000e+0
Identity = 670/713 (93.97%), Postives = 674/713 (94.53%), Query Frame = 0
Query:    1 MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXX--------RAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVSL 705
            MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYL PQI+ KSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQE GSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGP PVNSMFALLGLRRAERVLV+VVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIW RAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    MFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQAL QGDRLVLIGSDLITRAKRKREM QEEHPSMREAV E+GDSA                 QAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXX        RAVVRGGRSTS AVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYS+RRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGV L
Sbjct:    1 MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVEVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWIRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----MFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALAQGDRLVLIGSDLITRAKRKREMRQEEHPSMREAVTEMGDSAGRQQ-------------QAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXRAVVRGGRSTSGAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVVL 696          
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A6H5J944_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J944_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 3.330e-86
Identity = 173/207 (83.57%), Postives = 176/207 (85.02%), Query Frame = 0
Query:  506 MREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXX---------RAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGV 703
            MREAV EIGDSA                 QAMGRVWAISERPVTL DNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXX         RAVVRGGRS S AVVGGV+SRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYS+RRELLCLTGAGLQVLTRLRPVDLLYDLL R+HVEGV
Sbjct:    1 MREAVTEIGDSASATDPTAGGGAGGRQQ-QAMGRVWAISERPVTLVDNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXSRAVVRGGRSVSGAVVGGVLSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLVRDHVEGV 206          
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.130e-67
Identity = 230/747 (30.79%), Postives = 317/747 (42.44%), Query Frame = 0
Query:   12 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY--HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSV--AYGFWYSVFSVGSPVPSRQC---------------------SRLAHKSSSGGPSPVNSMFALLGLRRAERV---------------------LVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNG--QSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLT----IVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPSVYG----------AYCCGGVTVLAQ-ALTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXRAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLL 695
            F  L +A+  ++ +L +DE                 +  YFC+P+T   LG  +  +S   LP  L   + R++  TFMGLLPE++HAW++VDN L LWNY        +F+ELEQVIV V L  P++GVF   V+++L VAT VEV+L+AVT      + G  R   + VR T F AS+DGV+M  I  HP GR+FMAGKDGNLYEL Y    A G W S   +G    SR+C                     SR A  ++   P P+  +     ++R  RV                     L+D+ VDPLRN LYT+D  G +  ++LG DG  T       ++W  + +FC+ +     Q       F+     + V+L VV A E   V LV V  SGMR+YL       +    + T    ++ +R PPP  LW++                                       QP  GF A   R                 AY    VTV+AQ A  +G      G  L+   +       +   S+ E   EI  +                     G V AI E P  L D P +  + AL   SG PS + N                    R  R+           RA     ++  A   V P PPL   P    G+ GGL  R   G+V L EL  Q  + +R LLCL+GAGL ++ +LRP+D+L+ LL
Sbjct:   15 FSALADAHGEVVSHLLQDEAQNTTLYSQLLDNPGGAAHGYFCEPHTADQLGLPLELRSTIPLPAELLDLQQRMQVATFMGLLPELNHAWLSVDNALLLWNYVDGADVVKKFQELEQVIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVT------DGGDGR---LDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGKDGNLYELIYEAGGATG-WLSYVGLGGSSGSRKCRKINRSTTPSSAVWNSFKQGRSRAARGAAITSPGPMAGLL----VKRLPRVTAARAXXXXXXXXXXXAGAASLLDLAVDPLRNALYTVDSTGVLRHYNLGPDGQQTVPVGGDLDLWAASGQFCRLHSTNRAQDVPDARAFEPGHGLEAVALSVVDACEDACVHLVVVASSGMRVYLGPSGRASEIDTAQATSPLRVLHVRAPPPAALWEH------------------------RKALANPAAGAAPPSQPPTGFAAGATRXXXXXXXXXXXXXXXXXAYYAHRVTVVAQRAAGRGXXXXXXGLGLVAICESGVARLDQPQVSLAETALEIDPA---------------------GGVLAIEEHPTVLGD-PAMASLLALTYTSGTPS-AHNEIARQLAEANEDAPVAPPSARSQRAAH-------PPRAADGDPNAPPAGE-VPPPPPLCLPP---RGWLGGL--RGARGVVPLRELATQHAAPQRRLLCLSGAGLHMVAKLRPLDVLHRLL 687          
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.580e-55
Identity = 190/688 (27.62%), Postives = 309/688 (44.91%), Query Frame = 0
Query:   52 FCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ------DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENG---SPR--NRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFA--LLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNG-QSGLSHLTFKDPKQ-----HQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSS----------GGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPS--VYGAYCCGGVTVLAQA-LTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXRAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPL---VASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVS 704
            F +PY +++ G  +  +    +P AL+ +   ++CM+FMGLLPEI  AW+++DN L+LWNY         DF +F  L+Q+IV+VALVPP+ GVF ++V+++LAVAT VE++LLAV + E+P+  G    P   N  + +R T+F  S+D V+M+K+    +GR+FM G DG+LYE  Y+    F   +  +G  +  R+C +L H +     SP++S+    L  L    + LVDVVVD +R +LY L     ++ +DLG +G+          +      +C+ + +  + G     F   K       +IVS+ VVP TE+  V LV V+++G R Y+S  S              +    L++V +R PPP ++                                          +P +G+P ++  Q  S  V+ AY C G  V A+    + D + +   D  T                RE  A +   +                  A  +VWA+ E    + D   I R   +     + +P+                  R++    R   L++ G +              +R   P+PPL    A     AG  G  N ++V   V + E+ +Q +  RR  L L+  G+    + RP+D LYDL++R+ + G+ 
Sbjct:   11 FPEPYQSTW-GGAVHYEGVTAVPPALTEQYRSLKCMSFMGLLPEISCAWLSIDNKLFLWNYERARYQTDADFLEFDGLDQIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAF-EEPEGTGVLGQPLGLNGTMTLRPTSFSVSSDNVTMMKLCGTNSGRIFMGGSDGSLYEALYANEEEFALGL-GLGFGMAGRKCRKLNHSA-----SPLSSLVPGFLKQLSAPSKPLVDVVVDDVRQILYALREDNSLEGYDLGVNGDLLKPFGTRIQLRREVKHWCERHTSSYRPGPDSRLFDSTKPTSGALDKIVSMNVVPLTEANNVHLVLVSNAGFRFYVSTVSRYHSSXXXXXXXXAKRPTTLSVVHVRAPPPVEVGS-------------------------------------ARGEPMEGYPPRYSPQTSSRSVHSAYYCHGCLVTAEGGADEADTVRVSQPDFCTE---------------REVAAGLSHWSVTSGRANAALQEATQSIAASQKVWALDEVAPLVND---ISRAHLVALAMASRTPALPELPTFLNPTSSSGSGSRSLPTSTRPR-LSLRGPI--------------ARAAPPAPPLSLAYADRDSGAGI-GPANQKEV---VPMNEMAMQLWLPRRTFLGLSNVGIHRFLKRRPIDYLYDLVSRDDIRGIG 616          
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: L8HDY8_ACACA (Nucleoporin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDY8_ACACA)

HSP 1 Score: 201 bits (511), Expect = 2.040e-50
Identity = 119/340 (35.00%), Postives = 182/340 (53.53%), Query Frame = 0
Query:   63 PQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGG------KRHNFRLTIVQIRCPP 396
            PQ R      LPE L +    +EC  F+GL PEI+ AW+TVDN L LWNY ++++  + + +Q+IV+V L+PPK+ VF+++V++VL +AT VE++LLAV +     E+ +P+   I +  T    S D V+M+KI     GR+FM G DG+LYEL Y    G W+S          ++  ++ H            M AL     A+  ++D+V+D  RN+LYTL   G ++++DLG DG        + N+   A   C      Q G         K+  + S+ V+P +ESK + LVA+T S +R+Y S  S  G       +   +L ++ IR PP
Sbjct:   86 PQFRLLKMIPLPETLHQMYKSIECKCFLGLFPEINRAWITVDNQLCLWNYESKEYAIWTDQDQIIVSVGLIPPKRDVFSEDVKYVLVLATPVEIVLLAVWF-----EDNTPQGE-IHLEPTRIALSADNVNMVKIVGTKRGRIFMGGSDGSLYELEYQADEG-WFS----------KRARKINHTR--------GIMSALTSYWSAKPAIIDIVIDESRNILYTLSARGAIEVYDLGTDGLGFQHVAAMSNVIASAETLCPRLKFTQIG---------KEASVKSIAVIPKSESKYLTLVAITSSALRLYFSALSLSGDAAAIPSQRPTKLELIHIRFPP 391          
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A7S3M7K2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7K2_9STRA)

HSP 1 Score: 199 bits (507), Expect = 7.200e-50
Identity = 201/740 (27.16%), Postives = 301/740 (40.68%), Query Frame = 0
Query:   12 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRE------------------LEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFC---QGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFR---------------LTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALTQG-DRLVLIGSDLITRAKRKREMHQE-EHPSMREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXRAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPLV---------ASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVS 704
            F +L  A+  L   LR DE + ++  Q +       S  Y+ +PY   + GP +   SF  LP+ +  +  ++EC +FMG LPE+   W+TVDN L+LW Y +   T F                    + +VIV+VAL  PK GVF   V++VL VA+ VEV+LLAVT  E+            ++  T +   +D V+M+K+    +GR+FMAG DGN+YEL YS +   W ++   G      +C ++ H + +     +   F L      E  LVD+ VD +R V+Y +   G +  F LG+ G  TT   + FN+   A       +    G                ++SL V+P TESK V +VAV  +G+RIYLS  ++     N+                + +  +R PP     +                                              P+    Q   V  A    GVT+LA    Q  D LV +  DL+ RA     +    +HPSMRE V  IG                     + G+++AI E    +   P++ R+RA+ A S  P    N+               RAV  G         G  +S        +  ++   A   P+V         A P G+      LN   + G +    L     S +R+ L LT  G+  L +LRP D+LY  LA  HV  ++
Sbjct:    3 FKILEKASETLQDKLRLDESALDIADQFSFRPDMHGSHRYYTEPYKTQW-GPLLEYGSFTALPKRILDQYTKIECASFMGTLPELGRVWVTVDNKLFLWKYTSAPSTSFPNEVAEDVDAISEDCEVYDGISEVIVSVALSAPKPGVFLDTVKYVLVVASPVEVVLLAVTCDEQGNN--------FKLVPTAYTMPSDNVAMVKVVGSQSGRIFMAGNDGNVYELDYSNSESVWSALVDAGGEHSRHKCRKINHFAWNWRLVHILPPF-LKSFAGEEDSLVDLAVDNVRQVVYAITAKGVLSAFYLGSTGTETTLFLSSFNVLDAARTHLTVSRSLPEGSPKPESFANTTAPGFNVLSLHVLPLTESKKVHVVAVLGNGIRIYLSLLTANRGLFNYMPGPQQQSGNYSVPGGVEVAYVRSPPSPAALRVCSNSSGRLSSASAPDGIQSAGGAGAGAELENGSA-----------PSYMPSQALKVSSALYSQGVTMLALDKQQHPDELVCLFEDLVGRAHLTLGLPPAYQHPSMREGVC-IG----------------LDETTSGGKIYAIKENCAQI-HFPDVARLRAMFAHSSTPP---NSSIRDASHHFDTSLESRAVAAGAHQAG---GGSGLSWLVGQDGDNTQSAVTPASEVPVVFGADALAMAAKPAGTGFDTFDLNQVALLGEMSWQHLPCSSVSLQRQFLVLTNQGIHTLRKLRPADVLYRHLA--HVNSLA 695          
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: I2CP24_NANGC (Nuclear pore complex protein Nup155 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP24_NANGC)

HSP 1 Score: 187 bits (475), Expect = 3.650e-47
Identity = 131/404 (32.43%), Postives = 204/404 (50.50%), Query Frame = 0
Query:   16 RNANTVLLHNLRRDELSPELQKQLTAT---GMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ-DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAE-RVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYL-SCGSS---GGKRHNFR---LTIVQIRCPPPEKLWQYLHQH 407
            R A    +    R E  PE  +   A+   G  S    ++  P+ +   GP +  +S    P A+ R    ++ M+F GL  EI  AW+TVDN+LY+W+YHT+       +L+Q+IV V LV P   VF   V H+L   T   V L A+ +     E+G+P +  +QVRRTNFR STDGV M K+     GR+F+AG+DG++YE+ YS     ++          S +C +L   S   GP+ +     L  L +     +VD+VVDP R++LY+L     + ++DLG   ++ T      +++T A R+ +    G+       F      +++SL V+  +ES T  L+AV+++G R Y  +C  +   G K    R   L +V +R PP   +W+ L  H
Sbjct:   42 RQAVLATIEEKMRKEGKPEDSRMNYASMSGGGVSGDMPFYIHPWKDPAFGPPVEYQSLRPFPPAILRTYSLLQAMSFQGLWTEIHRAWITVDNLLYIWDYHTEASHAIVDDLDQLIVAVGLVRPNPEVFKDTVTHLLVACTPSAVELFALCF-----EDGTP-DSALQVRRTNFRVSTDGVVMRKVVGTRTGRIFLAGQDGSVYEIQYSNEKDLYF--------YSSNKCRKLNRTS---GPASLAVSAVLRHLWKTNVSEIVDLVVDPTRSILYSLSADNLIQVYDLGEKDDACTSLGIKEDVFTMALRYFKHRHRGEQ----QRFTKGHPFRLLSLHVLSCSESATKHLLAVSNAGHRFYFETCPKTPYIGSKLFAPRPSTLALVDVRLPPKPSVWEALRGH 424          
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: K3X038_GLOUD (Nucleoporin_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X038_GLOUD)

HSP 1 Score: 172 bits (436), Expect = 1.460e-43
Identity = 121/381 (31.76%), Postives = 181/381 (47.51%), Query Frame = 0
Query:   27 RRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVAL-VPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGG---------KRHNFRLTIVQIRCPPP 397
            R D   P+L  QL      S  Q YF +PY   +    ++  +   LP  ++   +  + +T  GLL  ID+AW +VD  L+LWNY  +      E +Q +V V + + P  GVF  +V+HVL VATTVEV+L+AV Y     EN  P+   ++++RT    STD   + +I    NGR+F  G DG++YE  Y        +  S   P  ++ C ++AH S+     P      L+GL  +   +++   D  R +LY+L   G + LFD G  G  T    ++ N+    A++ +     +              QIVSL V+P  ES  V LVAV  + +R Y++  S             +   RL IV IR PPP
Sbjct:   32 REDAQYPDLYDQLANQ---SEPQNYFFEPYATQWCPQLVKKGNVIPLPGVIATSLEDTKSITLSGLLHAIDYAWTSVDTRLFLWNYKARGKFAVFEFDQAVVAVGICMKPAPGVFTDKVQHVLVVATTVEVLLVAVLY-----ENNDPQGGAVKLQRTKLSVSTDNCVVRRIVTTRNGRIFFGGSDGSVYEFLYGPD-----AESSSAIPFFNKPCKKIAHTSTYAAYLP----SFLMGLTSSPGKILEFANDEERQILYSLHENGHITLFDQGVSGEDTKVVCSL-NLLEAGAKYARENRRTRVSCPDERLFQNTNMQIVSLAVIPREESAFVNLVAVASNAIRFYITVYSRRTYTVGNAIPRTKRPSRLEIVYIRLPPP 394          
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A1Y2C791_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C791_9FUNG)

HSP 1 Score: 179 bits (453), Expect = 3.990e-43
Identity = 108/313 (34.50%), Postives = 174/313 (55.59%), Query Frame = 0
Query:   65 IRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHT-QDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLV-DVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSC 375
            + ++    LP+ L RE D ++C  F+GL PEI  AW+T+D+ L+LWN+ + ++F  F E +QVIV+V LV P  GVF  E+ ++L VAT +E++L+AV Y+E            + + RT+   ++D VSM  I    NGR+FM G +G LYEL Y    G W++          R+C ++   +++       S+F        E   V  +++D  RN+LY L    +++LF LG DG    +     +I+++A ++ +      SG+    + DP+  QIVSL ++P +ES  V L+AV+ SG R+Y +C
Sbjct:   48 VAAERMIPLPDQLYREYDFLQCRCFLGLFPEIHRAWITIDHQLFLWNFDSPEEFVVFDEQDQVIVSVGLVKPLPGVFLDEINYLLVVATPIEIMLVAVAYNEAKGPAA------LNLYRTDITIASDNVSMTSIVGSSNGRIFMCGSNGRLYELQYQSEDG-WFT----------RKCRKIDLTTTA------YSLFVPTIFNFVEEDPVRKIIIDAQRNILYALTERSNIELFYLGVDGKDFKKLFRQTDIFSQAQKWLEN-----SGVYPHPYLDPRNFQIVSLHIIPPSESHNVHLMAVSSSGYRLYFAC 332          
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A3R7FJY6_9STRA (Nucleoporin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7FJY6_9STRA)

HSP 1 Score: 176 bits (447), Expect = 6.210e-43
Identity = 128/400 (32.00%), Postives = 190/400 (47.50%), Query Frame = 0
Query:    8 DHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQ---IRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY-HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALL--GLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSG----GKRHNFRLTIVQIRCPPP 397
            DH+    L  ++ VL      D  SP+L  Q+ A     TS  YF +PYTN+  G Q   +  +     P A++   D +   +F GLL EI HAW++VDNVL+LW+Y   + F  F  ++Q I  VA+  P  GVF   V+HVL VAT  ++ L+ + Y     E+  P N  I+++ T    STD V++ KI +   GR+F  G DG+L+E  Y    G  + +         R+C +  H  S     P  S+F  L   L  +   +VD+ +DP R++LY       + ++DL   G      +   +I   AARFCQ      +              I S+ VV   ES ++  VAV+ +G+R YLS  + G      +    L +  IR PPP
Sbjct:   16 DHEELEALSQSHKVLEQAYSVDSKSPDLVDQI-ADHSEPTSHNYFFEPYTNTAAGWQAQLVHKQKLLPYPAAITSAYDNMRSGSFSGLLQEIHHAWVSVDNVLFLWDYTRAERFVVFDGIDQTISAVAIAKPIPGVFKAFVKHVLVVATASDMRLVPILY-----EHSDPVNGAIRLQATKLCISTDDVTVKKIVSTAGGRIFFGGSDGHLHEFVYDATEGMLHQLGW------KRKCRKETHTQSLSTYIP--SIFRSLTGALTSSHGKIVDLTIDPERHILYVTQEPATIHVYDLLPPGELKLVASK--DIHAEAARFCQRNHRTWTSCPEPRLFTTNMTTISSVSVVGRDESASIHAVAVSSTGIRFYLSTFTPGYFSSSSKRPTHLDMSHIRLPPP 399          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0M6_ECTSI0.000e+093.97Nucleoporin_N domain-containing protein n=1 Tax=Ec... [more]
A0A6H5J944_9PHAE3.330e-8683.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YRU3_9STRA1.130e-6730.79Nup133 N terminal like-domain-containing protein n... [more]
A0A7R9YE90_9STRA1.580e-5527.62Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
L8HDY8_ACACA2.040e-5035.00Nucleoporin, putative n=1 Tax=Acanthamoeba castell... [more]
A0A7S3M7K2_9STRA7.200e-5027.16Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
I2CP24_NANGC3.650e-4732.43Nuclear pore complex protein Nup155 (Fragment) n=1... [more]
K3X038_GLOUD1.460e-4331.76Nucleoporin_N domain-containing protein n=1 Tax=Gl... [more]
A0A1Y2C791_9FUNG3.990e-4334.50Nucleoporin-domain-containing protein n=1 Tax=Rhiz... [more]
A0A3R7FJY6_9STRA6.210e-4332.00Nucleoporin_N domain-containing protein (Fragment)... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalPFAMPF08801Nucleoporin_Ncoord: 66..407
e-value: 4.3E-57
score: 193.8
IPR004870Nucleoporin, Nup155-likePANTHERPTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 48..698

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig800contigEcto-sp13_S_contig800:125..7350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig800.19315.1mRNA_Ecto-sp13_S_contig800.19315.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig800 125..7548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig800.19315.1 ID=prot_Ecto-sp13_S_contig800.19315.1|Name=mRNA_Ecto-sp13_S_contig800.19315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=705bp
MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQA
YFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAW
MTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAV
ATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAH
PNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSS
GGPSPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGA
DGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGV
VPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKL
WQYLHQHQEAAGAAPVPADGGGGTPTAQQQQQQQQQQQQQMFQPADGFPA
KWERQPPSVYGAYCCGGVTVLAQALTQGDRLVLIGSDLITRAKRKREMHQ
EEHPSMREAVAEIGDSAAAAAVPTAGGGAGGRQQQAMGRVWAISERPVTL
ADNPEIGRVRALLALSGAPSPSDNNGTTAANGGGGGGGGSRAVVRGGRST
SLAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARD
VGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHV
EGVSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014908Nucleoporin_Nup133/Nup155_N
IPR004870Nucleoporin_Nup155