mRNA_Ecto-sp13_S_contig800.19315.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI) HSP 1 Score: 1203 bits (3112), Expect = 0.000e+0 Identity = 670/713 (93.97%), Postives = 674/713 (94.53%), Query Frame = 1
Query: 199 MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXX--------RAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVSL 2313
MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYL PQI+ KSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQE GSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGP PVNSMFALLGLRRAERVLV+VVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIW RAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQAL QGDRLVLIGSDLITRAKRKREM QEEHPSMREAV E+GDSA QAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXX RAVVRGGRSTS AVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYS+RRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGV L
Sbjct: 1 MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVEVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWIRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----MFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALAQGDRLVLIGSDLITRAKRKREMRQEEHPSMREAVTEMGDSAGRQQ-------------QAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXRAVVRGGRSTSGAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVVL 696
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A6H5J944_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J944_9PHAE) HSP 1 Score: 279 bits (713), Expect = 1.380e-85 Identity = 173/207 (83.57%), Postives = 176/207 (85.02%), Query Frame = 1
Query: 1714 MREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXX---------RAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGV 2307
MREAV EIGDSA QAMGRVWAISERPVTL DNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXX RAVVRGGRS S AVVGGV+SRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYS+RRELLCLTGAGLQVLTRLRPVDLLYDLL R+HVEGV
Sbjct: 1 MREAVTEIGDSASATDPTAGGGAGGRQQ-QAMGRVWAISERPVTLVDNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXSRAVVRGGRSVSGAVVGGVLSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLVRDHVEGV 206
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA) HSP 1 Score: 252 bits (644), Expect = 5.600e-67 Identity = 230/747 (30.79%), Postives = 317/747 (42.44%), Query Frame = 1
Query: 232 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY--HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSV--AYGFWYSVFSVGSPVPSRQC---------------------SRLAHKSSSGGPSPVNSMFALLGLRRAERV---------------------LVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNG--QSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLT----IVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPSVYG----------AYCCGGVTVLAQ-ALTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXRAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLL 2283
F L +A+ ++ +L +DE + YFC+P+T LG + +S LP L + R++ TFMGLLPE++HAW++VDN L LWNY +F+ELEQVIV V L P++GVF V+++L VAT VEV+L+AVT + G R + VR T F AS+DGV+M I HP GR+FMAGKDGNLYEL Y A G W S +G SR+C SR A ++ P P+ + ++R RV L+D+ VDPLRN LYT+D G + ++LG DG T ++W + +FC+ + Q F+ + V+L VV A E V LV V SGMR+YL + + T ++ +R PPP LW++ QP GF A R AY VTV+AQ A +G G L+ + + S+ E EI + G V AI E P L D P + + AL SG PS + N R R+ RA ++ A V P PPL P G+ GGL R G+V L EL Q + +R LLCL+GAGL ++ +LRP+D+L+ LL
Sbjct: 15 FSALADAHGEVVSHLLQDEAQNTTLYSQLLDNPGGAAHGYFCEPHTADQLGLPLELRSTIPLPAELLDLQQRMQVATFMGLLPELNHAWLSVDNALLLWNYVDGADVVKKFQELEQVIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVT------DGGDGR---LDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGKDGNLYELIYEAGGATG-WLSYVGLGGSSGSRKCRKINRSTTPSSAVWNSFKQGRSRAARGAAITSPGPMAGLL----VKRLPRVTAARAXXXXXXXXXXXAGAASLLDLAVDPLRNALYTVDSTGVLRHYNLGPDGQQTVPVGGDLDLWAASGQFCRLHSTNRAQDVPDARAFEPGHGLEAVALSVVDACEDACVHLVVVASSGMRVYLGPSGRASEIDTAQATSPLRVLHVRAPPPAALWEH------------------------RKALANPAAGAAPPSQPPTGFAAGATRXXXXXXXXXXXXXXXXXAYYAHRVTVVAQRAAGRGXXXXXXGLGLVAICESGVARLDQPQVSLAETALEIDPA---------------------GGVLAIEEHPTVLGD-PAMASLLALTYTSGTPS-AHNEIARQLAEANEDAPVAPPSARSQRAAH-------PPRAADGDPNAPPAGE-VPPPPPLCLPP---RGWLGGL--RGARGVVPLRELATQHAAPQRRLLCLSGAGLHMVAKLRPLDVLHRLL 687
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA) HSP 1 Score: 216 bits (550), Expect = 4.460e-55 Identity = 190/688 (27.62%), Postives = 309/688 (44.91%), Query Frame = 1
Query: 352 FCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ------DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENG---SPR--NRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFA--LLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNG-QSGLSHLTFKDPKQ-----HQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSS----------GGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPS--VYGAYCCGGVTVLAQA-LTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXRAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPL---VASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVS 2310
F +PY +++ G + + +P AL+ + ++CM+FMGLLPEI AW+++DN L+LWNY DF +F L+Q+IV+VALVPP+ GVF ++V+++LAVAT VE++LLAV + E+P+ G P N + +R T+F S+D V+M+K+ +GR+FM G DG+LYE Y+ F + +G + R+C +L H + SP++S+ L L + LVDVVVD +R +LY L ++ +DLG +G+ + +C+ + + + G F K +IVS+ VVP TE+ V LV V+++G R Y+S S + L++V +R PPP ++ +P +G+P ++ Q S V+ AY C G V A+ + D + + D T RE A + + A +VWA+ E + D I R + + +P+ R++ R L++ G + +R P+PPL A AG G N ++V V + E+ +Q + RR L L+ G+ + RP+D LYDL++R+ + G+
Sbjct: 11 FPEPYQSTW-GGAVHYEGVTAVPPALTEQYRSLKCMSFMGLLPEISCAWLSIDNKLFLWNYERARYQTDADFLEFDGLDQIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAF-EEPEGTGVLGQPLGLNGTMTLRPTSFSVSSDNVTMMKLCGTNSGRIFMGGSDGSLYEALYANEEEFALGL-GLGFGMAGRKCRKLNHSA-----SPLSSLVPGFLKQLSAPSKPLVDVVVDDVRQILYALREDNSLEGYDLGVNGDLLKPFGTRIQLRREVKHWCERHTSSYRPGPDSRLFDSTKPTSGALDKIVSMNVVPLTEANNVHLVLVSNAGFRFYVSTVSRYHSSXXXXXXXXAKRPTTLSVVHVRAPPPVEVGS-------------------------------------ARGEPMEGYPPRYSPQTSSRSVHSAYYCHGCLVTAEGGADEADTVRVSQPDFCTE---------------REVAAGLSHWSVTSGRANAALQEATQSIAASQKVWALDEVAPLVND---ISRAHLVALAMASRTPALPELPTFLNPTSSSGSGSRSLPTSTRPR-LSLRGPI--------------ARAAPPAPPLSLAYADRDSGAGI-GPANQKEV---VPMNEMAMQLWLPRRTFLGLSNVGIHRFLKRRPIDYLYDLVSRDDIRGIG 616
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: L8HDY8_ACACA (Nucleoporin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDY8_ACACA) HSP 1 Score: 201 bits (511), Expect = 5.310e-50 Identity = 119/340 (35.00%), Postives = 182/340 (53.53%), Query Frame = 1
Query: 385 PQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGG------KRHNFRLTIVQIRCPP 1386
PQ R LPE L + +EC F+GL PEI+ AW+TVDN L LWNY ++++ + + +Q+IV+V L+PPK+ VF+++V++VL +AT VE++LLAV + E+ +P+ I + T S D V+M+KI GR+FM G DG+LYEL Y G W+S ++ ++ H M AL A+ ++D+V+D RN+LYTL G ++++DLG DG + N+ A C Q G K+ + S+ V+P +ESK + LVA+T S +R+Y S S G + +L ++ IR PP
Sbjct: 86 PQFRLLKMIPLPETLHQMYKSIECKCFLGLFPEINRAWITVDNQLCLWNYESKEYAIWTDQDQIIVSVGLIPPKRDVFSEDVKYVLVLATPVEIVLLAVWF-----EDNTPQGE-IHLEPTRIALSADNVNMVKIVGTKRGRIFMGGSDGSLYELEYQADEG-WFS----------KRARKINHTR--------GIMSALTSYWSAKPAIIDIVIDESRNILYTLSARGAIEVYDLGTDGLGFQHVAAMSNVIASAETLCPRLKFTQIG---------KEASVKSIAVIPKSESKYLTLVAITSSALRLYFSALSLSGDAAAIPSQRPTKLELIHIRFPP 391
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A7S3M7K2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7K2_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.500e-49 Identity = 201/740 (27.16%), Postives = 301/740 (40.68%), Query Frame = 1
Query: 232 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRE------------------LEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFC---QGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFR---------------LTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALTQG-DRLVLIGSDLITRAKRKREMHQE-EHPSMREAVAEIGDSAXXXXXXXXXXXXXXXXXQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXRAVVRGGRSTSLAVVGGVVSRAKAWQRSSRYASRPVAPSPPLV---------ASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSNRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVS 2310
F +L A+ L LR DE + ++ Q + S Y+ +PY + GP + SF LP+ + + ++EC +FMG LPE+ W+TVDN L+LW Y + T F + +VIV+VAL PK GVF V++VL VA+ VEV+LLAVT E+ ++ T + +D V+M+K+ +GR+FMAG DGN+YEL YS + W ++ G +C ++ H + + + F L E LVD+ VD +R V+Y + G + F LG+ G TT + FN+ A + G ++SL V+P TESK V +VAV +G+RIYLS ++ N+ + + +R PP + P+ Q V A GVT+LA Q D LV + DL+ RA + +HPSMRE V IG + G+++AI E + P++ R+RA+ A S P N+ RAV G G +S + ++ A P+V A P G+ LN + G + L S +R+ L LT G+ L +LRP D+LY LA HV ++
Sbjct: 3 FKILEKASETLQDKLRLDESALDIADQFSFRPDMHGSHRYYTEPYKTQW-GPLLEYGSFTALPKRILDQYTKIECASFMGTLPELGRVWVTVDNKLFLWKYTSAPSTSFPNEVAEDVDAISEDCEVYDGISEVIVSVALSAPKPGVFLDTVKYVLVVASPVEVVLLAVTCDEQGNN--------FKLVPTAYTMPSDNVAMVKVVGSQSGRIFMAGNDGNVYELDYSNSESVWSALVDAGGEHSRHKCRKINHFAWNWRLVHILPPF-LKSFAGEEDSLVDLAVDNVRQVVYAITAKGVLSAFYLGSTGTETTLFLSSFNVLDAARTHLTVSRSLPEGSPKPESFANTTAPGFNVLSLHVLPLTESKKVHVVAVLGNGIRIYLSLLTANRGLFNYMPGPQQQSGNYSVPGGVEVAYVRSPPSPAALRVCSNSSGRLSSASAPDGIQSAGGAGAGAELENGSA-----------PSYMPSQALKVSSALYSQGVTMLALDKQQHPDELVCLFEDLVGRAHLTLGLPPAYQHPSMREGVC-IG----------------LDETTSGGKIYAIKENCAQI-HFPDVARLRAMFAHSSTPP---NSSIRDASHHFDTSLESRAVAAGAHQAG---GGSGLSWLVGQDGDNTQSAVTPASEVPVVFGADALAMAAKPAGTGFDTFDLNQVALLGEMSWQHLPCSSVSLQRQFLVLTNQGIHTLRKLRPADVLYRHLA--HVNSLA 695
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: I2CP24_NANGC (Nuclear pore complex protein Nup155 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP24_NANGC) HSP 1 Score: 187 bits (475), Expect = 7.760e-47 Identity = 131/404 (32.43%), Postives = 204/404 (50.50%), Query Frame = 1
Query: 244 RNANTVLLHNLRRDELSPELQKQLTAT---GMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ-DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAE-RVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYL-SCGSS---GGKRHNFR---LTIVQIRCPPPEKLWQYLHQH 1419
R A + R E PE + A+ G S ++ P+ + GP + +S P A+ R ++ M+F GL EI AW+TVDN+LY+W+YHT+ +L+Q+IV V LV P VF V H+L T V L A+ + E+G+P + +QVRRTNFR STDGV M K+ GR+F+AG+DG++YE+ YS ++ S +C +L S GP+ + L L + +VD+VVDP R++LY+L + ++DLG ++ T +++T A R+ + G+ F +++SL V+ +ES T L+AV+++G R Y +C + G K R L +V +R PP +W+ L H
Sbjct: 42 RQAVLATIEEKMRKEGKPEDSRMNYASMSGGGVSGDMPFYIHPWKDPAFGPPVEYQSLRPFPPAILRTYSLLQAMSFQGLWTEIHRAWITVDNLLYIWDYHTEASHAIVDDLDQLIVAVGLVRPNPEVFKDTVTHLLVACTPSAVELFALCF-----EDGTP-DSALQVRRTNFRVSTDGVVMRKVVGTRTGRIFLAGQDGSVYEIQYSNEKDLYF--------YSSNKCRKLNRTS---GPASLAVSAVLRHLWKTNVSEIVDLVVDPTRSILYSLSADNLIQVYDLGEKDDACTSLGIKEDVFTMALRYFKHRHRGEQ----QRFTKGHPFRLLSLHVLSCSESATKHLLAVSNAGHRFYFETCPKTPYIGSKLFAPRPSTLALVDVRLPPKPSVWEALRGH 424
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: K3X038_GLOUD (Nucleoporin_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X038_GLOUD) HSP 1 Score: 172 bits (436), Expect = 2.630e-43 Identity = 121/381 (31.76%), Postives = 181/381 (47.51%), Query Frame = 1
Query: 277 RRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVAL-VPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGG---------KRHNFRLTIVQIRCPPP 1389
R D P+L QL S Q YF +PY + ++ + LP ++ + + +T GLL ID+AW +VD L+LWNY + E +Q +V V + + P GVF +V+HVL VATTVEV+L+AV Y EN P+ ++++RT STD + +I NGR+F G DG++YE Y + S P ++ C ++AH S+ P L+GL + +++ D R +LY+L G + LFD G G T ++ N+ A++ + + QIVSL V+P ES V LVAV + +R Y++ S + RL IV IR PPP
Sbjct: 32 REDAQYPDLYDQLANQ---SEPQNYFFEPYATQWCPQLVKKGNVIPLPGVIATSLEDTKSITLSGLLHAIDYAWTSVDTRLFLWNYKARGKFAVFEFDQAVVAVGICMKPAPGVFTDKVQHVLVVATTVEVLLVAVLY-----ENNDPQGGAVKLQRTKLSVSTDNCVVRRIVTTRNGRIFFGGSDGSVYEFLYGPD-----AESSSAIPFFNKPCKKIAHTSTYAAYLP----SFLMGLTSSPGKILEFANDEERQILYSLHENGHITLFDQGVSGEDTKVVCSL-NLLEAGAKYARENRRTRVSCPDERLFQNTNMQIVSLAVIPREESAFVNLVAVASNAIRFYITVYSRRTYTVGNAIPRTKRPSRLEIVYIRLPPP 394
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A1Y2C791_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C791_9FUNG) HSP 1 Score: 179 bits (453), Expect = 8.460e-43 Identity = 108/313 (34.50%), Postives = 174/313 (55.59%), Query Frame = 1
Query: 391 IRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHT-QDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALLGLRRAERVLV-DVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSC 1323
+ ++ LP+ L RE D ++C F+GL PEI AW+T+D+ L+LWN+ + ++F F E +QVIV+V LV P GVF E+ ++L VAT +E++L+AV Y+E + + RT+ ++D VSM I NGR+FM G +G LYEL Y G W++ R+C ++ +++ S+F E V +++D RN+LY L +++LF LG DG + +I+++A ++ + SG+ + DP+ QIVSL ++P +ES V L+AV+ SG R+Y +C
Sbjct: 48 VAAERMIPLPDQLYREYDFLQCRCFLGLFPEIHRAWITIDHQLFLWNFDSPEEFVVFDEQDQVIVSVGLVKPLPGVFLDEINYLLVVATPIEIMLVAVAYNEAKGPAA------LNLYRTDITIASDNVSMTSIVGSSNGRIFMCGSNGRLYELQYQSEDG-WFT----------RKCRKIDLTTTA------YSLFVPTIFNFVEEDPVRKIIIDAQRNILYALTERSNIELFYLGVDGKDFKKLFRQTDIFSQAQKWLEN-----SGVYPHPYLDPRNFQIVSLHIIPPSESHNVHLMAVSSSGYRLYFAC 332
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Match: A0A3R7FJY6_9STRA (Nucleoporin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7FJY6_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.620e-42 Identity = 128/400 (32.00%), Postives = 190/400 (47.50%), Query Frame = 1
Query: 220 DHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQ---IRSKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY-HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQENGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPSPVNSMFALL--GLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSG----GKRHNFRLTIVQIRCPPP 1389
DH+ L ++ VL D SP+L Q+ A TS YF +PYTN+ G Q + + P A++ D + +F GLL EI HAW++VDNVL+LW+Y + F F ++Q I VA+ P GVF V+HVL VAT ++ L+ + Y E+ P N I+++ T STD V++ KI + GR+F G DG+L+E Y G + + R+C + H S P S+F L L + +VD+ +DP R++LY + ++DL G + +I AARFCQ + I S+ VV ES ++ VAV+ +G+R YLS + G + L + IR PPP
Sbjct: 16 DHEELEALSQSHKVLEQAYSVDSKSPDLVDQI-ADHSEPTSHNYFFEPYTNTAAGWQAQLVHKQKLLPYPAAITSAYDNMRSGSFSGLLQEIHHAWVSVDNVLFLWDYTRAERFVVFDGIDQTISAVAIAKPIPGVFKAFVKHVLVVATASDMRLVPILY-----EHSDPVNGAIRLQATKLCISTDDVTVKKIVSTAGGRIFFGGSDGHLHEFVYDATEGMLHQLGW------KRKCRKETHTQSLSTYIP--SIFRSLTGALTSSHGKIVDLTIDPERHILYVTQEPATIHVYDLLPPGELKLVASK--DIHAEAARFCQRNHRTWTSCPEPRLFTTNMTTISSVSVVGRDESASIHAVAVSSTGIRFYLSTFTPGYFSSSSKRPTHLDMSHIRLPPP 399 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig800.19315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig800.19315.1 >prot_Ecto-sp13_S_contig800.19315.1 ID=prot_Ecto-sp13_S_contig800.19315.1|Name=mRNA_Ecto-sp13_S_contig800.19315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=705bp MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAback to top mRNA from alignment at Ecto-sp13_S_contig800:125..7548- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig800.19315.1 ID=mRNA_Ecto-sp13_S_contig800.19315.1|Name=mRNA_Ecto-sp13_S_contig800.19315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7424bp|location=Sequence derived from alignment at Ecto-sp13_S_contig800:125..7548- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig800:125..7548- >mRNA_Ecto-sp13_S_contig800.19315.1 ID=mRNA_Ecto-sp13_S_contig800.19315.1|Name=mRNA_Ecto-sp13_S_contig800.19315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2115bp|location=Sequence derived from alignment at Ecto-sp13_S_contig800:125..7548- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |