prot_Ecto-sp13_S_contig80.19311.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80.19311.1
Unique Nameprot_Ecto-sp13_S_contig80.19311.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length225
Homology
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BLAST of mRNA_Ecto-sp13_S_contig80.19311.1 vs. uniprot
Match: D8LGG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG6_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 9.520e-106
Identity = 173/181 (95.58%), Postives = 177/181 (97.79%), Query Frame = 0 
Query:   44 MGRIQADIELEQLQREESGSAMAARNQVRTVTAGWLVGVILGWXXXXXXXCLFSPALGFMMVLPFVSGGVIGGLVYSQLREKIRSLSRPPMPMEQEPQQPRGRSRSEDKREFLRQLQGRSDPSATYLHIGTDDSALPSGSFLRRVALGATHILVRSALDVTAAAACAMLGLGRGGGRTQGR 224
            MGRIQA+IELEQLQREESGSAM ARNQVRTVTAGWLVGVILGWXXXXXXXCLFSPALGFMMVLPFVSGGVIGGLVYSQLR+KIRSLSR PMPMEQE QQPRGRSRSEDK+EFLRQLQGRSDPSATYLH+GTDDS LPSGSFLRRVALGATHILVRSALDVTAAAACAMLGLGRGGGRTQGR
Sbjct:    1 MGRIQAEIELEQLQREESGSAMTARNQVRTVTAGWLVGVILGWXXXXXXXCLFSPALGFMMVLPFVSGGVIGGLVYSQLRDKIRSLSRRPMPMEQEHQQPRGRSRSEDKQEFLRQLQGRSDPSATYLHMGTDDSTLPSGSFLRRVALGATHILVRSALDVTAAAACAMLGLGRGGGRTQGR 181
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BLAST of mRNA_Ecto-sp13_S_contig80.19311.1 vs. uniprot
Match: K3X367_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X367_GLOUD)

HSP 1 Score: 54.7 bits (130), Expect = 2.130e-5
Identity = 38/130 (29.23%), Postives = 71/130 (54.62%), Query Frame = 0 
Query:    7 EEELTAQRDAAVSLCKDLQEKIR----SQAARYEARTEAAEMGRIQADIELEQLQREESGSAMAARNQVRTVTAGWLVGVILGWXXXXXXXCLFS-PALGFMMVLPFVSGGVIGGLVYSQLREKIRSLSR 131
            EEEL AQRDAA+++ K+LQ++++    S   ++E R   AE  R+ A+ EL++++ E           +       ++G ++GW        LF  P +GF+M+LP ++ G + GL  ++ + ++ +  R
Sbjct:    4 EEELIAQRDAAIAVTKELQKQLQELRGSLEHKFERRALNAERLRMHAETELKRVRDERDWELKICNRVLYLSLFAGMIGAVVGWCFGLQVFLLFGQPLVGFLMILPGMAIGSLIGLAIAKTKVQLENRRR 133
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BLAST of mRNA_Ecto-sp13_S_contig80.19311.1 vs. uniprot
Match: A0A5D6YFJ8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFJ8_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 3.000e-5
Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 0 
Query:    7 EEELTAQRDAAVSLCKDLQEKIRSQAARYEARTE----AAEMGRIQADIELEQLQREESGSAMAARNQVRTVTAGWLVGVI---LGWXXXXXXXCLFS-PALGFMMVLPFVSGGVIGGLVYSQLREKIRSLSR 131
            EEELTAQRDAA+++ K+LQ ++    A  E R E     AE  R+ A+ EL +++ E   SA   R   R +      GV+    GW        LF+ P +GF+++LP +  G + GL  ++ + ++ S  R
Sbjct:    4 EEELTAQRDAAIAVTKELQRQLVEVRADVERRLERRALTAERLRLHAEAELRRVRDE---SAWERRMHARVLYLSLFTGVLGALAGWCLGLQLLLLFNQPLVGFLLILPAMLFGGLVGLAIAKTKMQLESRQR 133
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80.19311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGG6_ECTSI9.520e-10695.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3X367_GLOUD2.130e-529.23Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6YFJ8_9STRA3.000e-533.83Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80contigEcto-sp13_S_contig80:676..10253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80.19311.1mRNA_Ecto-sp13_S_contig80.19311.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80 552..10253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80.19311.1 ID=prot_Ecto-sp13_S_contig80.19311.1|Name=mRNA_Ecto-sp13_S_contig80.19311.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=225bp
MEGSIEEEELTAQRDAAVSLCKDLQEKIRSQAARYEARTEAAEMGRIQAD
IELEQLQREESGSAMAARNQVRTVTAGWLVGVILGWAAGFVLGCLFSPAL
GFMMVLPFVSGGVIGGLVYSQLREKIRSLSRPPMPMEQEPQQPRGRSRSE
DKREFLRQLQGRSDPSATYLHIGTDDSALPSGSFLRRVALGATHILVRSA
LDVTAAAACAMLGLGRGGGRTQGR*
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