mRNA_Ecto-sp13_S_contig8.19306.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI) HSP 1 Score: 1038 bits (2685), Expect = 0.000e+0 Identity = 509/551 (92.38%), Postives = 525/551 (95.28%), Query Frame = 1
Query: 1 ASGDGLHHATVGIPASFTIQLVGDEIGGGGSLPDREPNSSFRFIYVWISSKDQIFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSEQDEGLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVPEKNVNQMIEVLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRITATGGTATDDSALRKMDEYQTQDPRVSFVSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMIGRAVETKAEFYAKAAASTAGSEQQSVDVGKSFQVCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVRECSMENRLP 1653
ASGDGLH ATVGI ASFTIQLVGDE+GGGGSLPD EPNSSFRFIYVWISSKDQI IAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSE+ EGLPIVGSPFSL IAGDFPTLDV+SLPVCGSQDDGS DIADTFWRPGTWLS+NVAS AHGVMR GWVFQPKSCVFDTFSYQDLMLLAS DGEPTWLVVVGGSVQRGVFLTLVDM LAAGQKDDMATSVL+KCWGYADLRV NLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLAST+F+DGTQWPATILAPSYLVPEKNVN MIEVLMDSLPPSW+GKL+FVDHMAGFSIHWTQGNPTR ALKDVRITATG T TDD ALRKMD YQTQDPRVSF+SAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIM+G+AVETKAE YAKAAAST GSEQ+ DVGKSFQVCSDCPRQMLPVHVKPIP+PVCE VESLPGNA+TGEVWDGELCPDWCMKQAPVSQ ETQSGPVDVRECS+E R P
Sbjct: 2 ASGDGLHQATVGISASFTIQLVGDEVGGGGSLPDWEPNSSFRFIYVWISSKDQILIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSERGEGLPIVGSPFSLKIAGDFPTLDVHSLPVCGSQDDGSTDIADTFWRPGTWLSANVASAAHGVMRTGWVFQPKSCVFDTFSYQDLMLLASPDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLEKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTVFRDGTQWPATILAPSYLVPEKNVNHMIEVLMDSLPPSWEGKLLFVDHMAGFSIHWTQGNPTRAALKDVRITATGRTPTDDVALRKMDGYQTQDPRVSFMSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMLGQAVETKAELYAKAAASTGGSEQERADVGKSFQVCSDCPRQMLPVHVKPIPEPVCEIVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSIETRQP 552
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE) HSP 1 Score: 957 bits (2474), Expect = 0.000e+0 Identity = 493/628 (78.50%), Postives = 511/628 (81.37%), Query Frame = 1
Query: 46 SFTIQLVGDEIGGGGSLPDREPNSSFRFIYVWISSKDQIFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSEQDEGLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVPEKNVNQMIE------------VLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRITATGGTATDDSALRKMDEYQTQDPRVSFVSAFPMYQAK--LFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLAN------------------------------------------------------------------------------IMIGRAVETKAEFYAKAAASTAGSEQQSVDVGKSFQVCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVRECSMENRLP 1653
SFTI+LVGDEIGGGGSLPD EPNSSFRFIYVWI SKDQI IAEVVGDGSNNGTLTATY+SDFPGDYLVHVEEVQPS++ EGLPIVGSPFSLTI GD PTLDV+SLPVCGSQDDGS DIADTFWRPGTWLSSNVAS AHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDM LAAGQKDDMATSVLQKCWGYADLRV NLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGST+AFVHSAK+FLAST F+DGTQWPATILAPSYLVPE NVNQMIE VLMDSLPPSW+GKL+FVDHMAGF IHWTQGNPTRTAL DVRITATG T TDD ALRKMD YQTQDPRVSF+SAFP+ A+ LFENERSRQGIRHYGASIHYHY+SSTTSDPEAHNGTTMVHSTMTEMLAN IMIGRAVETKAE +AKAAAST GSEQQSVDVGKSFQVCSDCPRQ+LP HVKPIP+PVCETVESLPGNA+TGEVWDGELCPDWCMKQAPVSQ ETQSGPVDVRECSME RLP
Sbjct: 2 SFTIELVGDEIGGGGSLPDWEPNSSFRFIYVWICSKDQILIAEVVGDGSNNGTLTATYQSDFPGDYLVHVEEVQPSKRGEGLPIVGSPFSLTITGDGPTLDVDSLPVCGSQDDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMALAAGQKDDMATSVLQKCWGYADLRVGNLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTAAFVHSAKEFLASTAFRDGTQWPATILAPSYLVPENNVNQMIEAYIRPASCAHAQVLMDSLPPSWEGKLLFVDHMAGFRIHWTQGNPTRTALMDVRITATGRTPTDDFALRKMDGYQTQDPRVSFISAFPVSFAERNLFENERSRQGIRHYGASIHYHYVSSTTSDPEAHNGTTMVHSTMTEMLANVSRRRVLTGTKAVSPRHFFVVSGFRDQQRKAGIEGEMLLVSKRTCWDRLQCPCTAEPKPPDAPFVFCRATFLYKSYSQIMIGRAVETKAELHAKAAASTEGSEQQSVDVGKSFQVCSDCPRQLLPAHVKPIPEPVCETVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSMETRLP 629
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: A0A6H5JGZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ7_9PHAE) HSP 1 Score: 768 bits (1983), Expect = 2.240e-268 Identity = 383/554 (69.13%), Postives = 443/554 (79.96%), Query Frame = 1
Query: 1 ASGDGLHHATVGIPASFTIQLVGDEIGGGGSL-PDREPNSSFRFIYVWISSKDQIFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSEQDEGLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVPEK--NVNQMIEVLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRITATGGTATDDSALRKMDEYQTQDPRVSFVSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMIGRAVETKAEFYAKAAASTAGSEQQSVDVGKSFQVCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVRECSMENRLP 1653
ASGDGLH ATVG+PASFTIQLVGD +G L P+ E S RFIYVWI+++DQI AEVV G +GTLTATYKSDFPG+Y VH+EEVQ S++ EG+PI+GSPFSLTIAGD PTL+VNSLPVC S +D + DIADTFWRPGTWLSSNVAS AHGVMRNGWVFQPKSCVFDTFSY+DLMLLAS+ GEPTWL+V+GGSV+RGVFLTL+DMVLAAGQK + +SVL KCWGYAD+RV NLRLTYQDMRL++ + TDSV CNNEKLTS STSA VHSA FLAST+FQDG QWP ++A S L+P + + +EVLMD++PPSW+GKL FVDHMAG +WT+ NPT TALK+V I + DD+ L KMD YQT+DPRVSF+S FPMYQAKLFENE SR GIR + S H+HY+S TS PE NGT MVHST+TEMLAN+++GRAVETKA +AKAAAS ++ S +VGKSFQVC DCP +LP HVKPIP+PVCE +ESLPG AK G+VW G LCPDWCMKQ PVSQ TQS VDVR CS P
Sbjct: 63 ASGDGLHKATVGMPASFTIQLVGDNLGDFHVLLPNWERIRSRRFIYVWIANEDQILTAEVVDGGRKDGTLTATYKSDFPGNYSVHIEEVQLSKKGEGVPILGSPFSLTIAGDAPTLNVNSLPVCSSDEDANTDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASIGGEPTWLLVLGGSVERGVFLTLIDMVLAAGQKQGIRSSVLNKCWGYADVRVGNLRLTYQDMRLFRFTISTDSVACNNEKLTSESTSALVHSAGQFLASTVFQDGGQWPTMMMAASRLIPTRAEHTQFSVEVLMDAMPPSWEGKLFFVDHMAGLGNYWTEENPTMTALKNVGIWFDRMSPDDDNGLGKMDGYQTRDPRVSFMSVFPMYQAKLFENEGSRNGIRRFAGSQHFHYISKETSAPETRNGTIMVHSTITEMLANVILGRAVETKASLHAKAAASKDEIQKLSSEVGKSFQVCWDCPGTLLPFHVKPIPEPVCEILESLPGGAKMGDVWSGSLCPDWCMKQEPVSQKNTQSDVVDVRMCSARTHQP 616
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI) HSP 1 Score: 710 bits (1832), Expect = 9.650e-247 Identity = 371/558 (66.49%), Postives = 404/558 (72.40%), Query Frame = 1
Query: 1 ASGDGLHHATVGIPASFTIQLVGDEIGGGG--SLPDREPNSSFRFIYVWISSKDQIFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSEQDEGLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVPEKNVNQMIEVLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRITATGGTAT-----DDSALRKMDEYQTQDPRVSFVSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMIGRAVETKAEFYAKAAASTAGSEQQSVDVGKSFQVCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVRECSMENRLP 1653
ASGDGLH ATVGI ASFTIQLVGD +GG G SLP+ EPNSS RFIYVWIS++DQI IAE+VGDG N GTLTATYKSDFPGDYLV+VEEVQPSEQ EGLPIVGSPFSL IAGDFPTLDVNSLPVC SQ+DGS DIADTFWRPGTWLSSNVAS AHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDD+ATS L KCWGY DL V NLRLTYQD ++W +GNPT AL+DV I TGG A+ D SAL KMD YQ +D RVSF+SAFPMYQAK FENE S+QG R YG +IHYHY+SS S+PEAHNG+ MVHSTMTEMLAN+MIGRAVETKA +AKAAAST ++Q+ DVGKSFQVCSDCPR ++P HVKPIP P+CET ESL G+A+ GEVW+GELCPDWCMKQAPVSQL TQSGPVDVRECS++ P
Sbjct: 75 ASGDGLHEATVGISASFTIQLVGDNLGGSGGSSLPNWEPNSSSRFIYVWISNEDQILIAEIVGDG-NTGTLTATYKSDFPGDYLVYVEEVQPSEQGEGLPIVGSPFSLKIAGDFPTLDVNSLPVCDSQEDGSNDIADTFWRPGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDIATSTLGKCWGYTDLLVGNLRLTYQD--------------------------------------------------------------------------------------------VYWYEGNPTMAALEDVSIAFTGGRASRRPPFDGSALSKMDGYQARDSRVSFMSAFPMYQAKFFENEGSKQGTRRYGGNIHYHYISSAASNPEAHNGSIMVHSTMTEMLANVMIGRAVETKAALFAKAAASTDVNKQERADVGKSFQVCSDCPRDLMPFHVKPIPDPICETAESLRGDAQVGEVWNGELCPDWCMKQAPVSQLATQSGPVDVRECSLKTDQP 539
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI) HSP 1 Score: 695 bits (1794), Expect = 5.770e-241 Identity = 356/554 (64.26%), Postives = 406/554 (73.29%), Query Frame = 1
Query: 1 ASGDGLHHATVGIPASFTIQLVGDEIGGGGSLPDREPNSSFRFIYVWISSKDQIFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSEQDEGLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVPEKNVNQMIEVLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRITATGGTATDDSALRKMDEYQTQDPRVSFVSAFPMYQAKLFENERSRQGI---RHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMIGRAVETKAEFYAKAAASTAGSEQQSVDVGKSFQVCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVRECSMENRLP 1653
ASGDGLH ATVG PASFTIQLVGD++G SLPD +PN+S RFIYVWI++KDQI IAEVV GS NGTLTATYKSDFPGDYLV+++EV+ S++DEG+PI+GSPFSLTIAGD PTLD+NSLPVC + +D +KDIADTFWR GTWLSSNVAS AHGVMRNGWVFQPKSCVFDTFSY+DLMLLASLDGEPTWL+V+GGSVQRGVFLTLVDMVLAAGQK D+ +SV+QKCWGYAD+RV N RLTYQ VLM +LPPSW+GKL FVDHMAGF I W + NPT T L+DVRI G + DD+ L KM+ Y+T+DPRVSF+S FPMYQAKLFENE S GI R + AS H+HY+SS S PE NGT MVHST+TEMLAN+MIGRAVETKA+ YAKAAAST + S +VGKSFQVCSDCP +LP HVK IP+ VCE VESLPG+AKTGEVW G LCPDWCMKQAP+SQ +T+SG V+VR C P
Sbjct: 60 ASGDGLHKATVGRPASFTIQLVGDQLG---SLPDWKPNTSTRFIYVWIANKDQILIAEVVDGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDINSLPVCSTHEDANKDIADTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLVDMVLAAGQKHDIRSSVIQKCWGYADVRVGNFRLTYQ---------------------------------------------------------------------VLMGALPPSWEGKLSFVDHMAGFEILWKEDNPTMTDLEDVRIWHLGSSPDDDNGLGKMEGYETRDPRVSFMSVFPMYQAKLFENEESNNGINGVRRFAASHHFHYVSSDASAPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWAGSLCPDWCMKQAPMSQSKTESGVVEVRRCPRNTDQP 541
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE) HSP 1 Score: 667 bits (1720), Expect = 2.870e-230 Identity = 345/546 (63.19%), Postives = 395/546 (72.34%), Query Frame = 1
Query: 1 ASGDGLHHATVGIPASFTIQLVGDEIGGGGSLPDREPNSSFRFIYVWISSKDQ--IFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSEQDEGLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVPEKNVNQMIEVLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRITATGGTATDDSALRKMDEYQTQDPRVSFVSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMIGRAVETKAEFYAKAAASTAGSEQQSVDVGKSFQVCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVREC 1632
ASGDGLH ATVG ASFTIQLVGD++G SLPD +PNSS RFIYVWI++KDQ I IAEV GS NGTLTATYKSDFPGDYLV+++EV+ S++DEG+PI+GSPFSLTIAGD PTLDVNSLPVC + +D +KDI DTFWR GTWLSSNVAS AHGVMRNGWVFQPKSCVFDTFSY+DLMLLASLDGEPTWL+V+GGSVQRGVFLTL+DMVLAAGQK D+ +SV+QKCWGYAD+RV NLRLTYQ VLMD+LPPSW+GKL FVDHMAGF I W + NPT TAL+DVR+ + DD+ L KMD Y+T+DPR MYQAKLFENE+S+ GIR + S H+HY+SS S PE NGT MVHST+TEMLAN+MIGRAVETKA+ YAKAAAST + + + GK+FQVCSDCP +LP HVK IP+ VCE V+SLPG+AKTGE W G LCPDWCMKQAPVSQ TQSG V+VR C
Sbjct: 41 ASGDGLHKATVGRSASFTIQLVGDQLG---SLPDWKPNSSTRFIYVWIANKDQDEILIAEVADGGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHEDTNKDIPDTFWRSGTWLSSNVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKHDIQSSVVQKCWGYADVRVGNLRLTYQ---------------------------------------------------------------------VLMDALPPSWEGKLSFVDHMAGFGIMWEEENPTMTALEDVRMWYLSSSPDDDNGLGKMDAYETRDPR--------MYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEFGKAFQVCSDCPSALLPFHVKAIPESVCEIVQSLPGDAKTGEAWPGSLCPDWCMKQAPVSQSTTQSGVVEVRWC 506
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: A0A6H5JGW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW9_9PHAE) HSP 1 Score: 644 bits (1662), Expect = 7.110e-221 Identity = 333/560 (59.46%), Postives = 394/560 (70.36%), Query Frame = 1
Query: 157 QIFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSEQDEGLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQD----------------------------------------MRLY----QVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVPEKNVNQMIEVLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRITATGGTATDDSALRKMDEYQTQDPRVSFVSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMIGRAVETKAEFYAKAAASTAGSEQQSVDVGKSFQ-----------------VCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVRECSMENRLP 1653
QI IAEV DGS NGTLTATYKSDFPGDYLV+++EV+ S++DEG+PI+GSPFSLTIAGD PTLDVNSLPVC + DD +K+IADTFWR GTWLSS+VAS AHGVMRNGWVFQPKSCVFDTFSY+DLMLLASLDGEPTWL+V+GGSVQRGVFLTL+DMVLAAGQK+D+ +SV+QKCWGYAD+RV NLRLTYQ+ M L+ +S DS+VCNNEKL SGST+AF+HSA+ FLASTIF++G WP ++APS L+P N V + W + NPT TAL+DVR++ + DD+ L KMD Y+T+DPRVSF+S FPMYQAKLFENE+S+ GIR + S H+HY+SS S PE NGT MVHST+TEMLAN+MIGRAVETKA+ YAKAAAST + + +VGKSFQ VCSDCP +LP HVK IP+ VCE VESLPG+AKTGE W G+LCPDWCMKQAPVSQ +T+SG V+VR C P
Sbjct: 13 QILIAEVADDGSKNGTLTATYKSDFPGDYLVYIDEVESSKKDEGVPILGSPFSLTIAGDAPTLDVNSLPVCSTHDDANKNIADTFWRSGTWLSSSVASAAHGVMRNGWVFQPKSCVFDTFSYEDLMLLASLDGEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIQSSVVQKCWGYADVRVGNLRLTYQEAVTDGLGRELAISALEWRQFHRELCWLRQLLFHNEAETNIMLLFFTNAGLSNSVDSLVCNNEKLMSGSTAAFIHSAEQFLASTIFREGGPWPTVVMAPSNLIPSNNEGTQFSVE---------------------EVLWKEENPTMTALEDVRMSYLSRSPDDDNGLGKMDGYETRDPRVSFMSVFPMYQAKLFENEQSKNGIRRFAVSQHFHYVSSDASGPETRNGTIMVHSTITEMLANVMIGRAVETKAKLYAKAAASTDEIRKMNAEVGKSFQAKAGTRRNGQFQREFVTVCSDCPSSLLPFHVKAIPESVCEIVESLPGHAKTGEAWPGDLCPDWCMKQAPVSQSKTESGVVEVRRCRRNTDQP 551
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI) HSP 1 Score: 581 bits (1497), Expect = 8.780e-195 Identity = 292/559 (52.24%), Postives = 390/559 (69.77%), Query Frame = 1
Query: 1 ASGDGLHHATVGIPASFTIQLVGDEIGG------GGSLPDREPN-SSFRFIYVWISSKDQIFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSEQDE---GLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVPEKNV-NQMIEVLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRITATGGTATDDSALRKMDEYQTQDPRVSFVSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMIGRAVETKAEFYAKAAAS----TAGSEQQSVDVGKSFQVCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVREC 1632
A+G GL A+ G+PASFTI+L G + G G PD + N RFIYVW++S+D +F+A V +G NGTLTA Y+S FPGDYLVHVE+V QD G PI+GSPFSLT++GD P +DV++LPVCG + + +D+A ++WR G+W+SSN+A+ HGV+R+GWVFQPK+CV++ FSY DLMLLA LD EP WL+ +G S+ RG+FLT++DM LA GQKD+ +TSV++KCWG+ D+R+ NLR++YQD+RLY VS D+ VCN+EKL SGST+A+V SA+ FL TIF++ WP+ I APS ++ N I VLMD+LP SW+G LV +D + G+ W GNPT L V+ AT DS L +M+ Y+ +DPRV+F+SAFPMYQ +LFENE SR G R YG SIHYHY+S + PEA+ G MVHS +TEMLAN++I RAV TKA +A T+ +E++ D ++F++C+DCP ++P+HVKP P C+TV +LPGNA G+ WD E CPDWCM + P Q +G VDVR C
Sbjct: 72 AAGPGLRSASTGVPASFTIRLAGVDASGARPEQQGEKNPDWDYNVDKKRFIYVWVASEDNVFVAGVRNNG--NGTLTAAYESSFPGDYLVHVEDVNLKVQDHFGRGRPIIGSPFSLTVSGD-PAVDVDALPVCGGEGE-EEDLASSYWRTGSWVSSNIAARNHGVLRDGWVFQPKTCVYEAFSYDDLMLLAGLD-EPAWLLALGNSILRGIFLTILDMALAQGQKDEFSTSVVKKCWGFIDIRIGNLRISYQDLRLYTVSSVDDATVCNDEKLASGSTAAYVSSAELFLQDTIFRENKPWPSVIWAPSNMIDSDEAPNLQISVLMDALPSSWRGTLVMLDQLYGYGYGWNTGNPTLATLSGVKPVNEFSPATRDSGLERMERYRQRDPRVTFMSAFPMYQGRLFENEESRIGERCYGCSIHYHYVSDDPNSPEAYGGAKMVHSAVTEMLANVLITRAVGTKAALRERAGTHSSDVTSTAEERQADT-RTFELCTDCPATLIPLHVKPSPLLKCDTVSALPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 624
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI) HSP 1 Score: 488 bits (1255), Expect = 1.230e-161 Identity = 264/500 (52.80%), Postives = 307/500 (61.40%), Query Frame = 1
Query: 154 DQIFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEVQPSEQDEGLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQDMRLYQVSGKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVPEKNVNQMIEVLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRITATGGTATDDSALRKMDEYQTQDPRVSFVSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMIGRAVETKAEFYAKAAASTAGSEQQSVDVGKSFQVCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVRECSMENRLP 1653
+QI IAEVV DGS NGTLTATYKSDFPG Y V+++EV+ S +D + DIADTFWRPGTWLSSNVAS AHGV+RNGWVFQP SCV DTFSY+DLMLLASLD EPTWL+V+GGSVQRGVFLTL+DMVLAAGQK+D+ +SVL+KCWGYAD++V NLRLTYQ +WT+ NPT TALK V I G DD+ L KMD YQT+D RVSF+S FPMYQAKLFEN++SR G+R + AS H+H++S+ S PE NGT MVHST+TEMLAN+M+GRAVETKA+ YAKAAAST + S +VGKSFQVCSDCP +LP HVK IP+PVC+ VESLPG AKTGEVW G+LCPDWCMKQAPVSQ +T+S V VREC P
Sbjct: 48 EQILIAEVVDDGSKNGTLTATYKSDFPGTYWVYIDEVELSRKD----------------------------------ANNDIADTFWRPGTWLSSNVASAAHGVLRNGWVFQPISCVLDTFSYEDLMLLASLDKEPTWLLVLGGSVQRGVFLTLIDMVLAAGQKNDIISSVLRKCWGYADVQVGNLRLTYQ--------------------------------------------------------------------------------------------GCYWTEENPTMTALKGVGIRFGGRWPNDDNGLGKMDGYQTRDSRVSFMSVFPMYQAKLFENQKSRNGLRRFAASQHFHFVSTDASAPETRNGTIMVHSTITEMLANVMVGRAVETKAKLYAKAAASTDEIRKISAEVGKSFQVCSDCPGSLLPFHVKGIPEPVCDIVESLPGQAKTGEVWSGDLCPDWCMKQAPVSQTKTESDVVKVRECGGNTDQP 421
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 7.740e-125 Identity = 222/519 (42.77%), Postives = 299/519 (57.61%), Query Frame = 1
Query: 124 RFIYVWISSKDQIFIAEVVGDGSNNGTLTATYKSDFPGDYLVHVEEV------------QPSEQDEGLPIVGSPFSLTIAGDFPTLDVNSLPVCGSQDDGSKDIADTFWRPGTWLSSNVASTAHGVMRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLVDMVLAAGQKDDMATSVLQKCWGYADLRVANLRLTYQDMRLYQVS-GKTDSVVCNNEKLTSGSTSAFVHSAKDFLASTIFQDGTQWPATILAPSYLVP-EKNVNQMIEVLMDSLPPSWQGKLVFVDHMAGFSIHWTQGNPTRTALKDVRIT-ATGGTATDDSALRKMDEYQTQDPRVSFVSAFPMYQAKLFENERSRQGIRHYGASIHYHYMSSTTSDPEAHNGTTMVHSTMTEMLANIMIGRAVETKAEFYAKAAASTAGSEQQSVDVGKSFQVCSDCPRQMLPVHVKPIPQPVCETVESLPGNAKTGEVWDGELCPDWCMKQAPVSQLETQSGPVDVRECS 1635
F+YVWI+S D + A VV +G +GTLTATY+S +PGDYLVHV++V +P E+ + IV SPF LTI+G+ +DV+ LP+C ++ +D DTFWR G+W+SS AS HGV+R+GWVFQPK+CV DTFSY DLMLLA+ EPTWL+++G SVQRGVFLTLVDMVLA GQK D ATS +QKCWG+A++RV NLRLTYQD+RL++V + DS VC+++KL + + FV +A+ FL ++F G QWP+ I+AP ++ ++ N I V+MD+LP +W G L+ ++HMAG + NPT L +V T D+ L ++ YQ QD R F+S FP I+I +AV +KA Y KA ST ++ F+VC+DCP ++P HVKP+P PVC L G+A GE W G CP WC K+ L + DVR CS
Sbjct: 5 HFVYVWIASTDHVLHAAVVDNG--DGTLTATYESPYPGDYLVHVQDVCTDMSVVGRGKKRPGERAKA--IVDSPFRLTISGEI-AVDVDDLPLCDAEHP-QEDEEDTFWRTGSWISSKFASAKHGVLRDGWVFQPKTCVHDTFSYDDLMLLATGSKEPTWLLILGTSVQRGVFLTLVDMVLAQGQKSDFATSAIQKCWGFAEVRVGNLRLTYQDLRLHEVGLAQDDSAVCHDDKLAINNVAVFVAAARRFLRRSVFAAGKQWPSVIMAPPFMEDSDEAANLPITVIMDALPSAWNGTLLMMEHMAGLGFTYNYDNPTAATLAEVNPTWHLSKFIGVDNGLGRIKRYQQQDARTKFMSTFP------------------------------------------------------IVISKAVGSKAALYEKATPSTNTHRGGGNEI---FEVCTDCPASLIPHHVKPVPVPVCNATSVLAGDAAVGEAWGGRGCPQWCSKEPVDGVLNLK----DVRVCS 456 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8.19306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8.19306.1 >prot_Ecto-sp13_S_contig8.19306.1 ID=prot_Ecto-sp13_S_contig8.19306.1|Name=mRNA_Ecto-sp13_S_contig8.19306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=397bp MRNGWVFQPKSCVFDTFSYQDLMLLASLDGEPTWLVVVGGSVQRGVFLTLback to top mRNA from alignment at Ecto-sp13_S_contig8:22589..30470+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8.19306.1 ID=mRNA_Ecto-sp13_S_contig8.19306.1|Name=mRNA_Ecto-sp13_S_contig8.19306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7882bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8:22589..30470+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8:22589..30470+ >mRNA_Ecto-sp13_S_contig8.19306.1 ID=mRNA_Ecto-sp13_S_contig8.19306.1|Name=mRNA_Ecto-sp13_S_contig8.19306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1191bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8:22589..30470+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |