mRNA_Ecto-sp13_S_contig8.19305.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: D7FXE1_ECTSI (WD repeat-containing protein 60 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE1_ECTSI) HSP 1 Score: 1978 bits (5124), Expect = 0.000e+0 Identity = 1105/1244 (88.83%), Postives = 1129/1244 (90.76%), Query Frame = 1
Query: 1 MSGDAGRLLDPSRDRHREPADEKPRRRGSXXXXXXXXXXXXXXXXXXXXRTAAPAGVGGERLREHDSDGPRRESGGLAASPDLALAQDKGFARPAEAGSSRTRPGAKGVRRRVSGTDHDGEQVHAALGEERHQRAQRDQPVAERELGGGGRGVDRAILQKWRSDASAAVADDIGRNLALPEGRGAPQVPLDMEVEDEDCGGGYDDECFEEYSDEFDGEGEDEGPPLPVGKVITAAVTRPGSARGEGGGAVVSTALKMRRAGDNIQAPDDKVLEELRDSLREENTVARERKVGRPSPKHSEAATADAKSSXXXXXXXXXXXXXXXXXXXXXXXTGARFEASAAVAKGKFSVDVSADVKRSRKGSGFKMGDAKALTRALAKGDPRAERVRAIRRASRLEVESVRLFDQAPILPIDLYHRRLRGQPALIRQAGTQTNDDARSVEGQTDEIVQSHKEVQFHLGHDDTALENLMRRLRSNRRPPERHQAKGEEGGQTQQRTVADRGEDAPANGPGSATTTFKGIYNGNGMAAGTDPGEQDYPASRYGTDFDGSGGRVSSAGGSDTLPPPLRLGKFLRQASVVMETLCEENLLHSPGKRWGGSHPLDPARGEDEDAVGRERGTLFSGAGGREGEGWEEVGVFSAGARG----ATAAATEDTGSSTAEEKRKQRGDESRVGGRGAGALLERSEVVGVEFSKVKRSMLVTAHARPAGRRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNTDIVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLREPASEGRAAESRKLGIHCGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIPSPTGGVGMDGGGGGIGGMISLGDACSFQVASLDDRGTVSIWLASEVPSGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWEAGSTADADSRRNGSSSSNWPAAISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASEGCPHASAGAMERSTWPTNPPATVAEDALSSPLALPTLALSSETLATGRRPKVALAFGGNVFVKTVAVRMFRQSRSPPVAGGVERSEAGVPEVSERERMKEWLGEVLWA 3720
MS DAGR LDPSRDRHREPADEKPRRRGS XXXXXXXXXXXXXXX PAG GGER+REH SDGPRRESGGLAASPDLALAQDKG RPAEAGSSRTRPGAKGVRRR+ GTDHDG QVHAALGEERHQ AQRDQPVAERELGG G GVDRAILQKWRSDASAAVADD+GRN ALP+GR APQVP DMEVEDEDCGGGYDDECFEEYSDEFDGEGEDEGPP PVGK A+VTRPGSARGEGGGAVVS ALKMRR GDNIQAPDDKVLEELRDSLREEN ARERKV RPSPK SEAATAD KSS XXXXXXXXXXXXXXTG EASAAVAKGKFSVD SADVKRSRKGSGFKM DAKALTRALAKGDPRAERVRAIR ASRLEVESVRLFDQ PILPIDLYHRRLRGQPALIRQAGTQTNDDARSVEGQTDEIVQSHKEVQFHLGHDDTALENLMRRLRSNRRPPERHQAKGEEGGQTQQRTV D GED PA+GPGSATTTFKGIYNGNGM AGTDPGEQ+YPA RYGTDFDGS GRVSSAGGSDTLPPPLRLGKFLRQASVVMETLCEENLLH+P KR GGSHPLDPARGE EDAVGRERG LFSGAGGREGEGWEEV ATAAATEDTGSSTAEEKR+Q GDE RV GRGAGALLE SEVVGVEFSKVKRSMLVTAHARP GRRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNT+ VQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLRE ASEGRAAESR+LG+HCGIRAPTY+TAGGDG GED LSKAG GHSSK+VSVVAIPSPTGGVGMDGGGGGIGGMISLGDACSFQVASLDDRGTVSIWLASEVP GDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSL A+VR GGGGAVPVS PRFSTSTRNRLD+TTDT SSAAAG A ALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLD XXX GAMGGVTCLAFSPFFPKYFLAGCGDGSVRLY++ASVVPLTTWEAGSTA ADSRRNG SSS+WPAAISSLAWSEHRPAVFFALDVLG+VHAFDLL+DDAGPVASEGCP AS G MERS PTNPPA V EDA SS LALPTLALS+ETLATGRRPKVALAFGG+VF KT+A RMFRQSRSPPVA GVERSEAGVPEVSERERMKEWLGEVLWA
Sbjct: 1 MSEDAGRPLDPSRDRHREPADEKPRRRGSRPSGAXXXXXXXXXXXXXXXXXXXPAGAGGERVREHGSDGPRRESGGLAASPDLALAQDKGSVRPAEAGSSRTRPGAKGVRRRIGGTDHDGGQVHAALGEERHQIAQRDQPVAERELGGSGGGVDRAILQKWRSDASAAVADDVGRNPALPDGRVAPQVPPDMEVEDEDCGGGYDDECFEEYSDEFDGEGEDEGPPPPVGKATAASVTRPGSARGEGGGAVVSPALKMRRPGDNIQAPDDKVLEELRDSLREENIAARERKVARPSPKPSEAATADVKSSSDAKAVRGAXXXXXXXXXXXXXXTGG--EASAAVAKGKFSVDASADVKRSRKGSGFKMADAKALTRALAKGDPRAERVRAIRGASRLEVESVRLFDQVPILPIDLYHRRLRGQPALIRQAGTQTNDDARSVEGQTDEIVQSHKEVQFHLGHDDTALENLMRRLRSNRRPPERHQAKGEEGGQTQQRTVVDGGEDVPASGPGSATTTFKGIYNGNGMVAGTDPGEQEYPAPRYGTDFDGSSGRVSSAGGSDTLPPPLRLGKFLRQASVVMETLCEENLLHAPVKRRGGSHPLDPARGEHEDAVGRERGALFSGAGGREGEGWEEVXXXXXXXXXXXXXATAAATEDTGSSTAEEKRRQGGDEGRVRGRGAGALLEGSEVVGVEFSKVKRSMLVTAHARPVGRRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNTENVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLRETASEGRAAESRELGLHCGIRAPTYVTAGGDGRGEDGGLSKAGCGHSSKVVSVVAIPSPTGGVGMDGGGGGIGGMISLGDACSFQVASLDDRGTVSIWLASEVPRGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLAAAVRPRGGGGAVPVSVPRFSTSTRNRLDQTTDTTASSAAAGSARALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDGXXXGTGEEREGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYNEASVVPLTTWEAGSTAAADSRRNGGSSSSWPAAISSLAWSEHRPAVFFALDVLGMVHAFDLLEDDAGPVASEGCPDASVGVMERSRSPTNPPAAVVEDASSSSLALPTLALSNETLATGRRPKVALAFGGSVFAKTLAGRMFRQSRSPPVADGVERSEAGVPEVSERERMKEWLGEVLWA 1242
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: A0A835Z6D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D0_9STRA) HSP 1 Score: 213 bits (542), Expect = 8.720e-53 Identity = 275/923 (29.79%), Postives = 370/923 (40.09%), Query Frame = 1
Query: 1093 FKMGDAKALTRALAKGDPRAER------VRAIRRASRLEVESVRLFDQAPILPIDLYHRRLRG--------QPALIRQAGTQTNDDARSVEGQTDEIVQSHKEVQFHLGHDDTALENLMRRLRSNRRPPER----HQAKGEEGGQTQQRTVADRGEDAPANGPGSATTTFKGIYNGNGMAAGTDPGEQDYPASRYGTDFDGSGGRVSSAGGSDTLPPPLRLGKFLRQASVVMETLCEENLLHSPGKRWGGSHPLDPA--RGEDEDAVGRERGTLFSGAGGREGEGWEEVGVFSAGARGATAAATEDTGSSTAEEKRKQRGDESRVGGRGAGALLERSEVVGVEFSKVKRSMLVTAHARPAGRRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVW---------NTDIVQ-GAPVS-VLCGEGLFSCLCLARHQA-HVVITGTEEGCLLLWDLREPASEGRAAESRKLGIHCGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIPSPTGGVGMDGGGGGIGGMISLGDACSFQVASLDDRGTVSIWLASEVPSGDEGGS--QTDLGLSPGGRVRLALSKALRPGD---QPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGA-LAFSPEDPNRFLIGDSSDR-VTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWE--AGSTADADSRRNGSSSSNWP-------AAISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASEGCPHASAGAMERSTWPTNPPATVAEDALSSPLALPTLALSSETLATGRRPKVALAFGGNVFVKTVAVRMFRQSRSPPVAGGVERSEAGVPEVSERERMKEWLGEVLW 3717
+++ +AKA+++ L R R R+ A+RL E L+ AP+ P++ YH RLR QT DD R V QT+ + E QFH+G DDTALEN++ R R+ H+ +G + G T A G G +G+Y + G+++ P + + + ++ RL FLR + V+E LC EN+ S GGS L A R DE R G F+ WE +G AA ++ + + + G A AL +S + +L A+AR A VCVW +TD + AP++ VL EG +C+C A H+ + G +G + LWDLR P G CG+R PTY TA S AG GH+S + G+ A + ASLDDRG V +WLA +V D+GGS Q DLGL+PGG VRLA S+ + P AS+R PR S+ + T A G A A L F D NRFL+G V H SRLG P PRAY XXXXXXXXX V CL+ S F P+YFLAGC DGSVRL+ S P+ W+ AG A A+ + WS HR AVF+ALD G++H FDLL DDAGP+ SE C A+A A A+ A + ALS+E L G P VA+ + ++ G ++RS A P +E R+ E L LW
Sbjct: 190 YRLAEAKAVSQRLGGAAARGARCGXXXXARSAAAAARLSTERFVLYSAAPVGPLERYHARLRSGGXXXXXXXXXXXXXXXXQTRDDDRDVGTQTETARAADAEAQFHMGSDDTALENMLARARARXXXXXXXXXXHRRQGSDPGVT---LTAXXXXXXXXTGEG------EGVY---------EHGDREAPGTVDAAEAEERAAQLRXXXXXXXXXGGARLAHFLRSVAPVVEALCVENIALS-----GGSAALAEAEARARDEGERDRAAGRAFASEATTS---WERLG-----------AAXXXXXXXXXDDWAVEPWLRTALAGASAAALA---------YSAARPPLLAVAYARSAX-------------------XXXXXXXXXAVCVWGARAAPLAGDTDASRPAAPLAAVLVAEGAPTCVCWGPAAAPHLCLAGAADGVVALWDLRTPCG-GXXXXXXXERPACGLRRPTYATA---------PRSAAG-GHASAVAXXXXXXXXXXXXXXXXXXXXXXGLFR---AAATAFASLDDRGVVIVWLAMDVT--DDGGSAQQQDLGLAPGGSVRLAHSRTVDTRALPLPPPPTASLR-----------QPRRSSRAAQETSVHSLCDTEGAVGGPAAACLCFFGRDSNRFLVGGXXXXAVLHCSRLGAQPVPRAYC--------GSGGXXXXXXXXXXXXXXXVLCLSASAFCPEYFLAGCADGSVRLHHQDSARPVAVWDGFAGMLGAARXXXXXXXXXXXXXXXXXXCVAVVDVRWSPHRAAVFYALDARGLLHVFDLLADDAGPLISERCCDAAAAASAEGKCGEGDDERCAQAACAC-------ALSAERLLAGAAPSVAVVGXXXXXXRLLS-------------GWLQRS-ADTPRQTEAHRVAELLRTALW 991
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: A0A7S3XQJ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQJ7_HETAK) HSP 1 Score: 174 bits (442), Expect = 1.760e-41 Identity = 193/683 (28.26%), Postives = 272/683 (39.82%), Query Frame = 1
Query: 1693 LRLGKFLRQASVVMETLCEENLLHSPGKRWGGSHPLDPARGEDEDAVGRERGTLFSGAGGREGEGWEEVGVFSAGARGATAAATEDTGSSTAEEKRKQRGDESRVGGRGAGALLERSEVVGVEFSKVKRSMLVTAHARPAGRRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNTDIVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLREPASEGRAA------ESRKLGIHCGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIP-----SPTGGVGMDGGGGGIGGMISLGDACSFQVASLDDRGTVSIWLASEVPSGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWEAGSTADADSRRNGSSSSNWPAA------------------------------ISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASEGCPHASAGAMERSTWPTNPPATVAEDALSSPLALPTLALSSETLATGRRPKVALAFGGNVFVKTVAVRMFRQSR 3618
LRL F++ AS V E +CE+N K + +ED+ +E LF+ A W+ +G + +A E+ GS +L + E+ G+ FS ++ +M +++ + TD+ L+ G++CVW+T + +C G+ SC + Q H+V+ GT +G +LLWDLRE E A + L IR+PTY +A +L HSSK+V + IP P G SFQ+A+LDDRG +++WL +E+ + GGS +DLGLS G+ RL LS+ L SL S+ P ST R T+ S A +LAF P+DPNRF+ S + +R G PPP + P G A V CL FSPF P YFLAGC DGSVRLY A P+ W D R G S ++S+ WS HRP VF+AL AFDLL D AGP+ W +E+ + P L LSS+ + GR P++AL G + + + V M R SR
Sbjct: 127 LRLSTFIQAASQVCEAVCEKNF-EQYKKHF------------EEDSESKEDQGLFTSA-----SKWKILGQGGRRLSNTSPSARENIGS-----------------------VLAQRELTGLVFSTLQPNMACSSYMLRS---------KEYFNEDETDD----LKDYGLICVWDTLNPEKPSRLGICRVGV-SCCAMGLFQTHLVMAGTTDGQVLLWDLRENKREILAQGDPIQKTANSLCSEGVIRSPTYTSA---------SLGPHIKSHSSKVVDITPIPVEILSKPHQGP----------------SQASFQIATLDDRGVLALWLVTELEKVELGGS-SDLGLSINGQTRLVLSRTL------SLDPSIED---------LNPNKQKSTSGRRTAKTEADASLTPGPCAQSLAFYPKDPNRFIATLSDGSIMQHTRFGNCPPPHHFRAPITFGSFE-------------NAPVPVLCLDFSPFLPDYFLAGCMDGSVRLYTIAEQFPILHWVG------DCLRGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVTSVRWSAHRPGVFYALTRDTEACAFDLLRDQAGPLH----------------WERYEAFVSSEEKMRGDA--PRLGLSSDKVKVGR-PRLALTGGSTIAFRELGVSMTRPSR 675
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: UPI001CF60C46 (cytoplasmic dynein 2 intermediate chain 1 isoform X1 n=8 Tax=Thunnus TaxID=8234 RepID=UPI001CF60C46) HSP 1 Score: 162 bits (410), Expect = 1.170e-36 Identity = 134/455 (29.45%), Postives = 193/455 (42.42%), Query Frame = 1
Query: 2056 VEFSKVKRSMLVTAHARPAGRRXXXXXXXXXXXXXXTDEREAV-LEGCGVVCVWNTDIVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLREPASEGRAAESRKLGIH-CGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIPSPTGGVGMDGGGGGIGGMISL------GDACSFQVASLDDRGTVSIWLASEVPSGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWEAGSTADADSRRNGSSSSNWPAAISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASE 3396
V FS+V+R +++ H +P T + AV L+ C ++C+WN P +L E C C + +A +V GT G ++LWDLRE AS K+G R PT+ T D + AG+GH S + SV +PS T G+ + L SFQ+ASLD+ G ++ W+ E+P +E GSQTDLGL PGG+V+L S +L ++ S +V+ T T L L F P D N F IG + V H + G PP+ Y G V+ + FSPF +FL GCGDGS+RL+ + P+ W+ G+ + + SL W++ RP VF LD +H +DLL +D PV +E
Sbjct: 664 VHFSQVQRHTMMSVH-KP------------------TTKPSAVRLDSCTLICIWNI-WEPSRPQKILVYESEVQCCCFSPGKAILVFAGTSVGSVVLWDLREHASNHYRL---KIGDEEWTFRQPTFST--------DAVM--AGFGHFSSVTSVEVVPSAT--------AEGLRPEVLLLASEEESSGLSFQLASLDESGVLNFWVVVELPKTNEAGSQTDLGLRPGGKVKLLHSSSLFTAERVSPRDAVKTA-------------KTGTLQTLH-----------------LKFLPTDSNHFFIGTNMGLVNHGTSHGLKAPPKFYS-----------------FQDVGVRPADVSSIHFSPFSQHFFLVGCGDGSIRLHAVSREQPVAEWKNGTAGEP---------------VVSLQWAQTRPTVFCVLDAASNLHIWDLLTNDTEPVVTE 1015
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: A0A6J2RX76_COTGO (LOW QUALITY PROTEIN: WD repeat-containing protein 60 n=1 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2RX76_COTGO) HSP 1 Score: 160 bits (404), Expect = 5.660e-36 Identity = 139/455 (30.55%), Postives = 196/455 (43.08%), Query Frame = 1
Query: 2056 VEFSKVKRSMLVTAHARPAGRRXXXXXXXXXXXXXXTDEREAV-LEGCGVVCVWNTDIVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLREPASEGRAAESRKLGI-HCGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIPSPTGGVGMDGGGGGIGGMISL------GDACSFQVASLDDRGTVSIWLASEVPSGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWEAGSTADADSRRNGSSSSNWPAAISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASE 3396
+ FS+V+R +++ H+ T + AV L+ C V+C+WN P VL E C C + +A +V GT G ++LWDLRE SE K+G R PT+ T D + A GH S + SV A+PS GG+ + L SFQ+ASLD+ G ++ W+ E+P +E GS TDLGL PGG+V+L S L ++ S + + G P+ T+ L F P D N F IG S V H + G PP+ Y + G + +D VT + FSPF FL GCGDGS+RL+ + P+ W RNG++ + SL W++ RP VF LD +H +DLL +DA PVA+E
Sbjct: 631 LHFSEVQRHTMMSVHS-------------------PTTKPSAVRLDSCTVICIWNI-WEPSRPQKVLIYESEVQCCCFSPGKAILVFAGTSVGSVVLWDLREHTSEHYRL---KIGEDEWTFRQPTFST--------DAVM--AASGHFSSVTSVEAVPSTV--------AGGLRPEVPLLASEEESSGLSFQLASLDEFGVLNFWVVVELPKANEAGSPTDLGLRPGGKVKLLHSSHLLTAERVSQRDAAKTG------PL-----------------QTL----------LLKFLPTDSNHFFIGTSMGLVNHGTSHGLKAPPKFYRF-QEAGVQPVD----------------VTSIHFSPFRKHLFLVGCGDGSIRLHAVSHEQPVAEW-----------RNGTAGEP----VVSLQWAQTRPTVFCVLDAASNLHIWDLLKNDAEPVATE 979
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: A0A1S3Q9P4_SALSA (WD repeat-containing protein 60 isoform X6 n=72 Tax=Salmonidae TaxID=8015 RepID=A0A1S3Q9P4_SALSA) HSP 1 Score: 157 bits (397), Expect = 4.270e-35 Identity = 142/457 (31.07%), Postives = 201/457 (43.98%), Query Frame = 1
Query: 2056 VEFSKVKRSMLVTAH---ARPAGRRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNTDIVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLREPASEGRAAESRKLGIH-CGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIPSPTGGVGMDGGGGGIGGMISL------GDACSFQVASLDDRGTVSIWLASEVPSGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWEAGSTADADSRRNGSSSSNWPAAISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASE 3396
V+FS+V+R +++ H A+P+ R L+ ++C+WN P +L E C C + +A +V GT G ++LWDLRE AS A + ++G + +R PT+ T D L A GH S + SV A+P+ G+ + L SFQ+ASLD G +++W+ E+P ++ GS TDLGL PGG+V+L S + L AS R+ STR+ KTT T L F P D N F IG + V H + G PP+ Y P + G R +D VT + FSPF FL GCGDGSVRL+ S PL W SS++ P + S+ W++ RP VF LD +H +DLL+ D PV +E
Sbjct: 681 VQFSQVQRQTMLSVHSPSAKPSAVR---------------------LDSKTIICIWNI-WEPSRPQKILVYESEVHCCCFSPGKATLVFAGTSVGSVVLWDLREHAS---AHYTLRIGENDWTLRHPTFST--------DAVL--AASGHMSSVSSVEAVPATV--------AEGLRPELPLFASDEESSGLSFQLASLDGNGVLNLWVVLELPKANDAGSHTDLGLRPGGKVKLLHSSTV-------LTASERS----------------STRD-AKKTTLLQTL--------LLKFLPSDSNHFFIGTNMGLVNHVTSHGLKAPPKFYRP-QVVGFRLVD----------------VTSIDFSPFGEPIFLVGCGDGSVRLHTVLSEQPLMEW-------------ASSTAGQP--VVSVQWAQTRPTVFCVLDAASYLHIWDLLEKDFEPVITE 1030
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: A0A4U5VH89_COLLU (WD repeat-containing protein 60 n=4 Tax=Sciaenidae TaxID=30870 RepID=A0A4U5VH89_COLLU) HSP 1 Score: 154 bits (389), Expect = 2.480e-34 Identity = 131/455 (28.79%), Postives = 194/455 (42.64%), Query Frame = 1
Query: 2056 VEFSKVKRSMLVTAHARPAGRRXXXXXXXXXXXXXXTDEREAV-LEGCGVVCVWNTDIVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLREPASEGRAAESRKLGI-HCGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIPSPTGGVGMDGGGGGIGGMISL------GDACSFQVASLDDRGTVSIWLASEVPSGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWEAGSTADADSRRNGSSSSNWPAAISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASE 3396
V FS+V+R +++ H T + AV L+ C ++C+WN P VL E C C + +A +V GT G ++LWDLRE +S K+G +R PT+ T D + AG GH S + SV +PS GG+ +SL SFQ+ASLD+ G ++ W+ E+P +E GS TDLGL PGG+V+L S +L + + + S GG + + T + + L F P D N F IG + V H + G PP+ Y G V+ + FSPF FL GCGDG++RL+ + P+ W+ +S++ P + +L W++ RP VF LD +H +DLL +D PV +E
Sbjct: 497 VHFSQVQRHTMMSVHG-------------------PTTKPSAVRLDSCTIICIWNI-WEPSRPQKVLVYESEVQCCCFSPGKAILVFAGTSVGSVVLWDLREHSSNHYRL---KIGEDEWTLRQPTFST--------DAVM--AGSGHFSSVTSVEVVPSAV--------AGGLRPEVSLLASEEESSGLSFQLASLDESGVLNFWVVVELPKANEAGSATDLGLRPGGKVKLLHSSSLLAAESGTQLLS------GGC------------HHEMQSKTGPLQTLH-------LKFLPTDSNHFFIGTNMGIVNHGTSHGLKAPPKFY-----------------RFQEAGVRPVHVSSVHFSPFVQHLFLVGCGDGTIRLHAVSHEQPVAEWK-------------NSTAGEP--VVALQWAQTRPTVFCVLDAASNLHVWDLLKNDTEPVITE 853
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: A0A3P8XK04_ESOLU (WD repeat domain 60 n=7 Tax=Esox lucius TaxID=8010 RepID=A0A3P8XK04_ESOLU) HSP 1 Score: 153 bits (386), Expect = 8.480e-34 Identity = 139/455 (30.55%), Postives = 194/455 (42.64%), Query Frame = 1
Query: 2056 VEFSKVKRSMLVTAHARPAGRRXXXXXXXXXXXXXXTDEREAV-LEGCGVVCVWNTDIVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLREPASEGRAAESRKLGIH-CGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIPSPTGGVGMDGGGGGIGGMISL------GDACSFQVASLDDRGTVSIWLASEVPSGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWEAGSTADADSRRNGSSSSNWPAAISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASE 3396
V FS+V+R +++ H PA E AV L+G ++CVWN P VL E +C C + +A +V GT G ++LWDLRE AS A + ++G + +R PT+ T D L A H S ++SV AIP+ G G+ +S+ SFQ+ASLD+ G ++ W+ E+P + GSQTDLGL PGG+V+L S + L S R S+ KTT T L P D + F IG + V H + G P+ Y P G VT + FSPF FL GCGDGSVRL+ + PL W S ++ P + S+ W++ RPAVF LD +H +DL++ D PV +E
Sbjct: 664 VHFSQVQRQTMLSVHRPPA-------------------EPSAVRLDGKTIICVWNI-WEPSRPHKVLVYESEVNCCCFSPGKATLVFAGTSVGSIVLWDLREQAS---AHYTLRIGENDWTLRHPTFST--------DAVL--AASSHMSSVISVEAIPAIM--------GEGLRPDLSMFSSDQESSGLSFQLASLDENGVLNTWVVLELPKANNAGSQTDLGLRPGGKVKLLHSSTV-------LTMSER-----------------SSSREPKKTTPLQTL--------LLKLLPSDSSNFFIGTNMGIVNHGTSHGLKTTPKFYKP-----------------QVVGFRPVTVTSIDFSPFGEPIFLVGCGDGSVRLHTVLNEQPLMEWS-------------SCTAGQP--VVSVQWAQTRPAVFCVLDAASCLHIWDLVEKDFEPVITE 1013
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: A0A6J2VUZ1_CHACN (WD repeat-containing protein 60 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VUZ1_CHACN) HSP 1 Score: 147 bits (370), Expect = 7.380e-32 Identity = 133/469 (28.36%), Postives = 191/469 (40.72%), Query Frame = 1
Query: 2029 LLERSEVVGVEFSKVKRSMLVTAHARPAGRRXXXXXXXXXXXXXXTDEREAVLEGCGVVCVWNTDIVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLREPASEGRAAESRKLGIH-CGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIPS----------PTGGVGMDGGGGGIGGMISLGDAC--SFQVASLDDRGTVSIWLASEVPSGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWEAGSTADADSRRNGSSSSNWPAAISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASE 3396
L EV ++FS+V+R L++ HA T L+ ++C+WN P +L +G C C + +A +V GT G +++WDLRE R + ++G +R PT+ T D L AG GH S + SV I + P M S ++ SFQ+ASLD+ G +++W+ E+P D GSQTDLGL PGG+V+L S ++ N DK+T + L+ L F P+D N + I ++ V H + G P+ Y G + VT L FSP +FLAGC DGSVRLY P+ W GSSS AA+ S+ WS RP+VF LD +H +DL + D P+ +E
Sbjct: 714 FLHGREVSLLQFSQVQRQTLLSVHA------------------PCTKASAVRLDSNTIICIWNM-WEPSRPQKILLYDGEVRCCCFSPGKARLVFAGTVVGSVVIWDLRE---HSREHYNLRIGEEDWTLRYPTFST--------DAVL--AGAGHLSTVRSVEPIVATVEEGLRPERPL--------------MASQDESLELSFQLASLDEYGVLNLWVVVELPKADGAGSQTDLGLRPGGKVKLLHSSSI---------------------------------NTCDKSTSRDVVTLGPSLSLQLKFLPKDSNHYYISTNTGLVRHGTLHGLKTAPKLY-----------------RSQVEGLSPVEVTALDFSPSGEPFFLAGCSDGSVRLYSIKIETPVQEW------------TGSSSG---AAVVSVQWSVTRPSVFCVLDAASDLHVWDLNETDDAPLITE 1071
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Match: UPI0014192B5B (LOW QUALITY PROTEIN: WD repeat-containing protein 60 n=3 Tax=Lacertinae TaxID=162266 RepID=UPI0014192B5B) HSP 1 Score: 144 bits (364), Expect = 3.490e-31 Identity = 117/402 (29.10%), Postives = 178/402 (44.28%), Query Frame = 1
Query: 2200 VVCVWNTDIVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLREPASEGRAAESRKLG-IHCGIRAPTYITAGGDGWGEDRALSKAGYGHSSKIVSVVAIPSPTGGVGMDGGGGGIGGMISLGD--ACSFQVASLDDRGTVSIWLASEVPSGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLVASVRAGGGGGAVPVSAPRFSTSTRNRLDKTTDTITSSAAAGLAGALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDXXXXXXXXXXGGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYDDASVVPLTTWEAGSTADADSRRNGSSSSNWPAAISSLAWSEHRPAVFFALDVLGVVHAFDLLDDDAGPVASE 3396
++CVWN +P +L E +C C + +A +V GT +G +L+WDLRE + R K+ R+PT+ T G A H+ +++V + + G+ + S + SFQ+AS+D+ GT+S+W+ E+ GD GSQ+DLGL PGG+++L S ++ N + DT+ L + F P +PN F++G V+H +R PPR + P + G R + + FSPF FL GC DGS+RL+ S +PL W +S+S P I SL W+ RPAVFF LD + VV+ +DLL++D PVA +
Sbjct: 685 IICVWNV-WQPSSPQKLLFCESQVTCCCFSPSKATLVFAGTIDGSVLVWDLRE---DSRLHHCMKVNETDWTFRSPTFSTDG----------VFASVNHTCSVLTVEPVSTSV----FKEQNCGLSYLSSQEEMLGLSFQIASMDENGTLSLWVVVELQKGDLAGSQSDLGLIPGGKIKLVHSSTVQ-------------------------------LNCRFCSRDTVLMKVPQTLN--IKFLPSNPNHFVVGTDVAIVSHGTRHELRIPPRWFKP--QQGAPRSIR---------------INAIDFSPFGKPIFLVGCSDGSIRLHQMTSELPLMQWN-------------NSTSGQP--IISLQWALTRPAVFFVLDAMSVVYIWDLLENDLAPVAKQ 1003 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8.19305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8.19305.1 >prot_Ecto-sp13_S_contig8.19305.1 ID=prot_Ecto-sp13_S_contig8.19305.1|Name=mRNA_Ecto-sp13_S_contig8.19305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1241bp MSGDAGRLLDPSRDRHREPADEKPRRRGSRSSGAAGGGSKKSTRRKSSSRback to top mRNA from alignment at Ecto-sp13_S_contig8:5180..14505+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8.19305.1 ID=mRNA_Ecto-sp13_S_contig8.19305.1|Name=mRNA_Ecto-sp13_S_contig8.19305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9326bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8:5180..14505+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8:5180..14505+ >mRNA_Ecto-sp13_S_contig8.19305.1 ID=mRNA_Ecto-sp13_S_contig8.19305.1|Name=mRNA_Ecto-sp13_S_contig8.19305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3723bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8:5180..14505+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |