mRNA_Ecto-sp13_S_contig7998.19303.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7998.19303.1
Unique NamemRNA_Ecto-sp13_S_contig7998.19303.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: A0A836CLN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN6_9STRA)

HSP 1 Score: 287 bits (735), Expect = 6.800e-87
Identity = 165/364 (45.33%), Postives = 210/364 (57.69%), Query Frame = 1
Query:    1 AMVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRL-------ASEIPLGREPFTCVGGPINIGELVSNPGKTKGDEKHRNDRRSYPAVYSS----RCLCRVSLDQSEGQAGSVEESRRPRSHLTSIAFSGRLCISSNWPLRPAHHREEIKSPAIGTCSSCGKTSSGSNFHAVHYKTIIAHFEQVVDLVSCDPANRTGVVEWPPSAEILEAAGGVGFGDIS-VATNADPST----IATEDVVVPPVIRSLHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELASLAFRATGR 1044
            A+VRAIW+PK+CL ERRVNCR+L D+RYG++ERAVTYDGPDI+S A PLRG+VLP+ V+  C+++ AHV+E+   + R+  +SLN KID +DR+WLLWS+SIRL       A+  P  R P  C G P            + GD      R   P + S         R+  D      G+V   R PR                                    CSSCG  +   +FHAV YKT++ HFEQV+DL S  P   +G V+WPP+ EI+ AAGGVGFG  + + ++ DP      I  EDV +PPVIR+LHP+LAA+ Y RHRRDPLFLYK A VCE C+L YA LAS AFR   R
Sbjct:  156 AVVRAIWTPKLCLTERRVNCRKLRDKRYGLFERAVTYDGPDIYSVARPLRGTVLPTAVRHLCDAIAAHVAEITIHQQRISCMSLNLKIDHKDRLWLLWSSSIRLVRDGSSAAAASPPARTP-ACDGNPAT--------DSSSGDGACGLQRLRSPVLMSEVVKVPAHLRLQQDAVHDPVGAVP--RAPRLQ----------------------------------CSSCGALTPAKSFHAVPYKTVVVHFEQVLDLASKHPEVTSGTVQWPPAPEIIAAAGGVGFGAAAAMLSSGDPPAAARAITLEDVTIPPVIRALHPRLAADAYARHRRDPLFLYKCAEVCERCYLAYAGLASAAFRTRSR 474          
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: F0YMK7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMK7_AURAN)

HSP 1 Score: 276 bits (705), Expect = 2.550e-80
Identity = 149/339 (43.95%), Postives = 201/339 (59.29%), Query Frame = 1
Query:    4 MVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRLASEIPLGREPFTCVGGPINIGELVSNPGKTKGDEKHRNDRRSYPAVYSSRCLCRVSLDQSEGQAGSVEESRRPRSHLTSIAFSGRLCISSNWPLRPAHHREEIKSPAIGTCSSCGKTSSGSNFHAVHYKTIIAHFEQVVDLVSCDPANRTGVVEWPPSAEILEAAGGVGFGDISVATNADPSTIATEDVVVPPVIRSLHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELAS 1020
            ++RAIWSPK+CLLERRVN +QLHD RYG+YERAVTY+GP+ FS A PLRGS LPSQ+Q  CE++V H++EV F+K R+ R+ +NFK+DSRDR+WLLWS+SIRL SE             PI+IG    N  +TK                               QA S++   +   ++  +              + +H   E +S A   C SC K ++   FH V YKTII HFE ++ L+  D    TG+++WPP+ E++ AAGGVGFG++      +       +V +PP+IR +HPKL    Y ++RRDPLF+YKT  VCE CFLVYAELA+
Sbjct:  139 VIRAIWSPKVCLLERRVNAKQLHDHRYGLYERAVTYEGPEHFSAAAPLRGSTLPSQIQRICENLVTHINEVSFQKHRIARMVINFKVDSRDRIWLLWSSSIRLTSEHKQA---------PISIG----NAAETK-------------------------------QAVSIDSIVQLPPYVKLVD-------------KASHSEAEPESLACVCCVSCAKVATSDQFHPVQYKTIITHFELLLSLLQVD--TETGLLKWPPAPEVIAAAGGVGFGNLLSHQERNKQEPRDINVTLPPIIRKVHPKLTPAMYRKYRRDPLFMYKTVAVCEDCFLVYAELAN 418          
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: F0YIR0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIR0_AURAN)

HSP 1 Score: 278 bits (710), Expect = 5.460e-80
Identity = 177/489 (36.20%), Postives = 258/489 (52.76%), Query Frame = 1
Query:    1 AMVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRLASEIPLGR----EPFTCVGGPINIGELVSNPGKTKGDEKHRNDRRSYPAVYSSRCLCRVSLDQSEGQAGSVEESRRPRSHLTSIAFSGRLCISSNWPLRPAHHREEIKSPAIGTCSSCGKTSSGSNFHAVHYKTIIAHFEQVVDLVSCDPANRTGVVEWPPSAEILEAAGGVGFGDISVATNADPSTIATEDVVVPPVIRSLHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELAS------LAFRATGRQA--LTDHTISTQFSAMHRSHTLSRLKLKEDSWQPLPKKKSSMTRPMGSYNVPQQVSPELPKTIRREEDIIRNQAGRADSGSGVVENSGTRLDDIIRAREEDFFRELSAEEHTGT---HPLMHMVASQQKL 1422
            A++RAIWSPK+CLLERRVN +QLHD+RYG+YERAVTY+GP+ FS A PLRGS LPSQVQ  CE++VAH++EV F+K  + R+  NFK+DS+ R+W LWS+SIRLA      R    +PF      I+I  +V  P   K  +K                      + S+ +A ++                  LC+                      C SCG++++   FH + YKTI+AHFEQ+V ++  D     G V+WPP+  I+ AAGGVGFG++    + + + +   D  +PP+IR +HPKL+ + Y ++RRDPLF+YKT  VCE CFLVYAEL+S      +  + TG+Q+  +T         A   SH L R +L+  S Q              S  +P + +P +P  I     +        D   G +      ++D+++ RE+ FF+E  + +       HPL H++ S Q +
Sbjct:  138 AIIRAIWSPKVCLLERRVNSKQLHDQRYGLYERAVTYEGPEHFSAAAPLRGSTLPSQVQRICENLVAHITEVSFQKHCIMRMVANFKVDSKGRIWFLWSSSIRLAGGRSQPRSITIDPFV-EPNAISINSIVQLPPHIKLVDK---------------------ANHSDDEAQAL------------------LCMH---------------------CISCGRSATSDQFHPIQYKTIVAHFEQLVAMLQTD---GHGSVKWPPNPTIIAAAGGVGFGNLEALADRNRNEMRGADATMPPIIRQIHPKLSLDAYRKYRRDPLFMYKTVVVCEDCFLVYAELSSSPNASVVTRQCTGKQSPFVTSDNCFPWRQAEMVSHKLPR-QLRMQSTQ------------SKSVWMPNE-APSIPAPIYNSAKLALPPQQAEDESVGRI----LSIEDMVKQREDLFFQEARSSQTVNLQKGHPLTHLITSFQSI 544          
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: A0A7R9U2G1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2G1_9STRA)

HSP 1 Score: 272 bits (695), Expect = 2.010e-78
Identity = 185/535 (34.58%), Postives = 267/535 (49.91%), Query Frame = 1
Query:    1 AMVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRLASEIPLGREPFTCVGGPINIGELVSNPGKTKGDE--KHRNDRRSYPAVYSSRCLCRVSLDQSEGQAGSVEESRRPRSHLTSIAFSGRLCISSNWPLRPAHHREEIKSPAIGTCSSCGKTSSGSNFHAVHYKTIIAHFEQVVDLVSCDPANRTG--VVEWPPSAEILEAAGGVGFGDISVATNADPSTIATEDVVVPPVIRSLHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELASLAFRATGRQALTDHTISTQF--SAMHRSHTLSRLKLKEDSWQPLPKKKSS----------MTRPMGSYNVPQQVSPELPKTIRREEDIIRNQAGRADSGSGVVENSGTRLDDIIRA------REEDFFRELSAEEHT--GTHPLMHMVASQQKL-CSIGVPAHQVDPRAAMKKSRRAAKMSPYERPQTLVE 1530
            A+VRAIWSPK+CLLERRVN RQLHD R+G+YE+ +TY+GP   S A PLRGSVLPSQ+Q  CE+VV+H +EV ++  RVCR+ LNFK+D+RD++W+LWS+S+R    IP    P       + IG ++  P     DE  +H   RR  P    +RC+                                                            SC ++     F +V YK+II HF+QV+ L++ + A++     ++WPP   +++AAGGVGFG  +            EDVV+PP+ R  HPKL+AE Y + R+DPLFLYKT  VCE CFLVYAELA+ A  ++     T       +  + +      +R K  ED+W+P+     S          + R   + +   +  PE+P  IR  +D+            G++  +   +DD + A      RE +FFR LS  + +  G  PL H+V SQQ++  +  +P            + R AK++PY   Q L E
Sbjct:   64 AVVRAIWSPKICLLERRVNKRQLHDPRFGLYEKCITYEGPAHHSVAAPLRGSVLPSQLQRICENVVSHFAEVSYQAFRVCRMVLNFKVDARDKIWVLWSSSLRTEGTIPTAASPPQAK--TMEIGAMLRVPDHVLLDETVQHGPLRRRVP----TRCI------------------------------------------------------------SCSRSFPSDQFQSVAYKSIILHFDQVLSLMAHEAASQGAKQTLDWPPDRRVIDAAGGVGFGP-AFDPKHQKGPFTEEDVVIPPIFRRHHPKLSAEAYAKLRKDPLFLYKTVSVCEECFLVYAELANTAAASSASSLTTIGRARLAYVGTPVLAESLRARRKFDEDAWKPIVAPVESRANRDREAVLLERQESTLSKVSKPVPEVPDAIRDIQDVR----------DGLLRETPDGVDDALAAAEALKQRENEFFRRLSLVDPSRHGASPLAHLVQSQQRIEFANSLPG-----------APRQAKVNPYLEKQVLFE 510          
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: D7FR95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR95_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 1.750e-77
Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 1
Query:    4 MVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRLASEIPLGREPFTCVGGPINIGELVSNPGKTKGDEKHRND--RRSYPAVY 453
            MVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQ CCESVVAHVSEVLFRKTRVCR+SLNFKIDSRDRVWLLWSNSIRLASE+P GRE FTCVGGPINIGEL +   + +G  K+R D  R  +P+V+
Sbjct:  114 MVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQRCCESVVAHVSEVLFRKTRVCRMSLNFKIDSRDRVWLLWSNSIRLASEMPPGRESFTCVGGPINIGELTNRKVR-QGAWKNRVDLDRIIWPSVH 264          
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: A0A7S1XZC3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZC3_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.540e-76
Identity = 212/633 (33.49%), Postives = 309/633 (48.82%), Query Frame = 1
Query:    1 AMVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRLASEIPLGREPFTCVGGP--------INIGELVSNPGKTKGDEKHRNDRRSYPAVYSSRCL-CRVSLDQSEGQAGSVEESRRPRSHLTSIAFSGRLCISSNWPLRPAHHREEIKSPAIGTCSSCGKTSSGSNFHAVHYKTIIAHFEQVVDLVSCDPANRTGVVEWPPSAEILEAAGGVGFGDISVATNADPSTIATEDVVVPPVIRSLHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELASLA------FRATGRQALTDHTISTQFSAMHRSHTLSRLKLKEDSWQPLP---KKKSSMTRP------MGSYNVPQQ--VSPELPKTIRREEDIIRNQAGRADSGSGVVENSGTRLDDIIRAREEDFFRELSAEEHT---GTHPLMHMVASQQKL-CSIGVPAHQVDPRAAMKKSRRAAKMSPYERPQTLVEYTGRSDASALQTKSTHLHTTRKKVSLGDPRAGSNSSSGDKISSSAARHREFLDNTLSAVHEQLESTALADI-------SGQGTPCAADDGQQS 1788
            A++RAIWSPK+CLLERR N RQLHD R+G+YER +TY+GPD  S A PLRGSVLPSQ+Q  CE+VV+HV+EV ++  R+ R+ LNFK+D+RD++WLLWS+S+RL              GGP        + IG ++  P     D  H+ +         +RC+ C  +   ++ Q  S +                  C+          H E+I +  +    S  + S G              FE+ +              EWPP  E++ AAG VGFG +        +    EDV++PP+ R LHPKL+ + Y + +RDPLFLYKT  VCE CFLV+AELAS A       +  GR  L  H  S       RS   S  K  +D+W+P+P   + K+   R       MG   + +    +PELP TIR  ++       +      +    G   +D +R RE +FFR +     T   G  PL+HM+ SQQ+L  +   P  +  PR A K        +PY   QTL +      A+A + +++      + V+     AG+ +     +S+SAA HR+FL++TL    ++L +T++ D        +G   P  A+D Q S
Sbjct:  143 AVIRAIWSPKICLLERRQNVRQLHDGRFGLYERCITYEGPDHHSRAAPLRGSVLPSQIQRICENVVSHVAEVSYQTFRISRMVLNFKVDARDKIWLLWSSSMRLE-------------GGPRRLANTRDVEIGAMMRVPKHVLLD--HQVNHGDLQRRVLARCISCGKNYPDNQFQPVSYK------------------CVML--------HFEQILT-LMALDPSYDQPSGG--------------FERTL--------------EWPPEPEVIAAAGNVGFGLVEEELEKK-NKFVEEDVIIPPIFRHLHPKLSCKMYGKLKRDPLFLYKTCMVCEECFLVFAELASTAATSASVLKTIGRTRLA-HAGSAALGTGPRSKG-SYSKYDDDAWKPVPVPAESKAKRAREALRKGGMGESTLSKVSGTAPELPDTIRGVQEARDVTFRKLFPDDNMDSQEGAYFEDSMRERENEFFRRMGQTGFTPQSGESPLVHMIQSQQRLDIANTAPGKEDIPRGARKTR------NPYLMKQTLPDERRERKAAAARARASKTQAAGQVVAA---TAGAPAYVTMGMSASAANHRKFLEDTLKNTQDRLATTSINDFLENFARTTGTNVPAQANDIQHS 693          
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: A0A6S8UJB5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8UJB5_9STRA)

HSP 1 Score: 258 bits (658), Expect = 6.670e-74
Identity = 189/574 (32.93%), Postives = 282/574 (49.13%), Query Frame = 1
Query:    1 AMVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRLASEIPLGRE-PFTCVGGPINIGELVSNPGKTKGDEKHRNDRRSYPAVYSSRCLCRVSLDQSEGQAGSVEESRRPRSHLTSIAFSGRLCISSNWPLRPAHHREEIKSPAIGTCSSCGKTSSGSNFHAVHYKTIIAHFEQVVDLVSCDPANRTGVVEWPPSAEILEAAGGVGFGDISVATNADPSTIATEDVVVPPVIRSLHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELASLAFRATGRQALTDHTISTQFSAMHRSHTLSRLKLKEDSWQPLPKKKSSMTRPMGSYNVPQQVSPELPKTIRREEDIIRNQAGRADSGSGVVENS----GTRLDDIIRAREEDFFRELSAEEHTGTHPLMHMVASQQKLCSIGVPAHQVDPRAAMKKSRRAAKMSPYERPQTLVEYTGRSDASALQTKSTHLHTTRKKVSLGDPRAGSNSSSGDKISSSAARHREFLDNTLSAV 1707
            A++RAIWSPK+CLLERRVN +QL+D+RYG+YERAVTY+GP+ FS A PLRG+ LPSQ+Q  CE++VAHV+EV F+K RV R+  NFK+DSR R+W LWS+SIRL       ++ P  C   PI+I   +  P      +K                                                            P H + E K      C SCGK+++   FH V Y+TII+HFE+ +  +     +++   ++ P   I+EA+GGVGFG    A +     +    +V+PP+I+ +HPKL+ E Y+R+RRDPLF+YK+A VCE+C+LVYAE  + A  ++ + +  D+T            T +  K K ++ + L K  ++     G+  + +Q +  L  +I      I +  G A++GS   ++     G  +  II  RE+ FF ++S+      HPL H+  S + +        Q  P     KS  A  ++PY     L +           TKS             D +          ++SS+ +HREFL +TL  V
Sbjct:  135 AIIRAIWSPKVCLLERRVNSKQLYDQRYGLYERAVTYEGPEHFSIASPLRGTALPSQIQRLCENLVAHVTEVSFQKCRVARMVANFKVDSRGRIWFLWSDSIRLERSCGKSQDLPRICT--PIDINRTIQLPADVTLIDK------------------------------------------------------------PNHSQGEFKPLNCLQCISCGKSATSDKFHQVRYQTIISHFERALAAI----VDKSQTSKYYPEPLIMEASGGVGFGK---AKDCAGIPLRGAGIVIPPIIKQIHPKLSPEIYKRYRRDPLFMYKSAAVCENCYLVYAEFVTAA--SSRKYSELDYT------------TKANAKTKTNTDEALQKNLAANN---GNKTLNRQTAKPLMPSIPAP---IYSVPG-ANTGSPYFDSKNYSDGLSVGAIIHQREKSFFNDVSSAHLQKGHPLAHLATSFRSI--------QQHPPGGFDKSSNAHTLNPYSNQPNLNK--------VFATKSVR-----------DEKGNQRMQRDFFLNSSSKQHREFLLSTLREV 591          
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: A0A3D4HJD4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A3D4HJD4_9BACT)

HSP 1 Score: 249 bits (635), Expect = 3.140e-72
Identity = 139/343 (40.52%), Postives = 193/343 (56.27%), Query Frame = 1
Query:    1 AMVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRLASEIPLGRE-PFTCVGGPINIGELVSNPGKTKGDEKHRNDRRSYPAVYSSRCLCRVSLDQSEGQAGSVEESRRPRSHLTSIAFSGRLCISSNWPLRPAHHREEIKSPAIGTCSSCGKTSSGSNFHAVHYKTIIAHFEQVVDLVSCDPANRTGVVEWPPSAEILEAAGGVGFGDISVATNADPSTIATEDVVVPPVIRSLHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELASLA 1026
            A++RAIWSPK+CLLERRVN +QL+D+RYG+YERAVTY+GP+ FS A PLRG+ LPSQ+Q  CE++VAHV+EV F+K RV R+  NFK+DSR R+W LWS+SIRL       ++ P  C   PI+I   +  P      EK                                                            P H + E K      C SCGK+++   FH V Y+TII+HFE+ +  +     +++   ++ P   I+EA+GGVGFG    A +     +    +V+PP+I+ +HPKL+ E Y+R+RRDPLF+YK+A VCE+C+LVYAE  + A
Sbjct:  100 AIIRAIWSPKVCLLERRVNSKQLYDQRYGLYERAVTYEGPEHFSIASPLRGTALPSQIQRLCENLVAHVTEVSFQKCRVARMVANFKVDSRGRIWFLWSDSIRLDRSCGKSQDLPRICT--PIDINRTIQLPADVTLIEK------------------------------------------------------------PNHSQGEFKPLNCLQCISCGKSATSDKFHQVRYQTIISHFERALAAI----VDKSQTSKYYPEPLIMEASGGVGFGK---AKDCAGIPLRGAGIVIPPIIKQIHPKLSPEIYKRYRRDPLFMYKSAAVCENCYLVYAEFVTAA 373          
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: A0A2R5GGU9_9STRA (Small glutamine-rich tetratricopeptide repeat-containing protein beta n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGU9_9STRA)

HSP 1 Score: 248 bits (632), Expect = 6.310e-67
Identity = 146/368 (39.67%), Postives = 208/368 (56.52%), Query Frame = 1
Query:    4 MVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRLASEIPLGRE--------PFTCVGGPINIGELVS--NPGKTKGDEKHRNDRRSYPAVYSSRCLCRV-SLDQSEGQAGS---VEESRRPRSHLTSIAFSGRLCISSNWPLRPAHHREEIKSPAIGTCSSCGKTSSGSNFHAVHYKTIIAHFEQVVDLVSCDPA-----NRTGV-VEWPPSAEILEAAGGVGFGDIS-----VATNADPS--TIATEDVVVPPVIRSLHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELASLA 1026
            ++R  WSPK+ LLERR N R L D +Y +YERAVTY+GPD +S A P+RG+ LP  +Q  CE +V HV+EV FRK  + R++ NFK+D  DRVWLLW +S+RLA   P            P + VG   ++  L S   P + +     +      P       + R  S +Q+   AG+   ++E R P S   S  F GR+  SS+     A+  E + +    TC SC  +     F+ V YKTI+AHFEQ + +++ + A      R+G+ +EWPPS E++   G +G G +      + T  D S   IA ED+ +PP+IR  HP LA   Y R+R+DP+FLYKT+ VCE C+LV+A++AS A
Sbjct:  140 VIRGAWSPKILLLERRENMRHLTDAKYSLYERAVTYEGPDHYSRAAPVRGAHLPLAIQRVCEDIVNHVAEVSFRKFSISRMAANFKVDGNDRVWLLWCSSLRLAQSFPASASADAGSLVPPASRVGAASSVSSLSSFGMPPRRQIVPSSKGPVSLLPHCEVPEVVQRAFSTNQASRAAGTHLPLDEIRPPES---SSGFDGRIAKSSDRDGPHANLSENVVAIQTSTCRSCRGSVLMDRFYRVPYKTIVAHFEQFMTILAANNACARSRRRSGLQIEWPPSRELVRVVGNIGLGPLEDLREVIRTAKDRSKVVIAQEDIEIPPIIREAHPHLACADYRRYRKDPMFLYKTSAVCEDCYLVFAQVASAA 504          
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Match: A0A6U2PKG9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PKG9_9STRA)

HSP 1 Score: 230 bits (587), Expect = 2.760e-63
Identity = 134/346 (38.73%), Postives = 191/346 (55.20%), Query Frame = 1
Query:    1 AMVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNSIRL-ASEIPLGREPFTCVGGPINIGELVSNPGKTKGDEKHRNDRRSYPAVYSSRCLCRVSLDQSEGQAGSVEESRRPRSHLTSIAFSGRLCISSNWPLRPAHHREEIKSPAIGTCSSCGKTSSGSN-FHAVHYKTIIAHFEQVVDLVSCDPANRTGVVEWPPSAEILEAAGGVGFGDISVATNADPSTIATEDVVVPPVIRSLHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELASLAFR 1032
            +M+ AIWSPK+C+LERR+N RQL+D ++ +YERA+T++GP++ STA PLRG+VL  ++Q  CE++V+H+ EV  R+ ++ R+  NFK+D++ +VW LWS SIRL   +   G  P             VSNPG    D  ++      P+V     L   +++      G  ++                                         C SC K     N  H V YKTIIAHFE+VVD++  D  ++  V+ WPP + ++ AAG VGFG    + +A  S   T D+V+PP+IR LH +L   GY R+RRDPLFL+KT  VCE CFL YA+LAS  F+
Sbjct:  139 SMICAIWSPKLCVLERRINRRQLNDVKFDLYERAITFEGPEMHSTAVPLRGNVLTGKIQHICETIVSHIFEVSERQNKISRMVTNFKVDNKGKVWFLWSTSIRLDIQDDNFGLYPND-----------VSNPGPLTIDPNYKLP----PSVN----LGPATVNNPSTDDGGAKK-----------------------------------------CLSCAKALPILNEAHPVPYKTIIAHFEKVVDMIKEDSLDKN-VISWPPESSVINAAGHVGFGFAKASNDASISFAETIDLVIPPIIRQLHTRLKVAGYRRYRRDPLFLHKTCSVCEICFLSYAQLASTGFQ 423          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7998.19303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLN6_9STRA6.800e-8745.33Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
F0YMK7_AURAN2.550e-8043.95Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0YIR0_AURAN5.460e-8036.20Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7R9U2G1_9STRA2.010e-7834.58Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D7FR95_ECTSI1.750e-7784.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XZC3_9STRA1.540e-7633.49Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6S8UJB5_9STRA6.670e-7432.93Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A3D4HJD4_9BACT3.140e-7240.52Uncharacterized protein (Fragment) n=1 Tax=Opituta... [more]
A0A2R5GGU9_9STRA6.310e-6739.67Small glutamine-rich tetratricopeptide repeat-cont... [more]
A0A6U2PKG9_9STRA2.760e-6338.73Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7998contigEcto-sp13_S_contig7998:4214..7075 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score302.4
Seed ortholog evalue4.8e-79
Seed eggNOG ortholog44056.XP_009041643.1
Model size1816
Hectar predicted targeting categorymitochondrion
Exons6
EggNOG OGs28Q4D@1,2QWT8@2759
Cds size1806
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7998.19303.1prot_Ecto-sp13_S_contig7998.19303.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7998 4221..7072 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464070.9934554-UTR-Ecto-sp13_S_contig7998:4213..42201681464070.9934554-UTR-Ecto-sp13_S_contig7998:4213..4220Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7998 4214..4220 -
1681464071.0660372-UTR-Ecto-sp13_S_contig7998:7072..70751681464071.0660372-UTR-Ecto-sp13_S_contig7998:7072..7075Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7998 7073..7075 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464071.004833-CDS-Ecto-sp13_S_contig7998:4220..47941681464071.004833-CDS-Ecto-sp13_S_contig7998:4220..4794Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7998 4221..4794 -
1681464071.0148864-CDS-Ecto-sp13_S_contig7998:5063..53291681464071.0148864-CDS-Ecto-sp13_S_contig7998:5063..5329Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7998 5064..5329 -
1681464071.025707-CDS-Ecto-sp13_S_contig7998:5549..57951681464071.025707-CDS-Ecto-sp13_S_contig7998:5549..5795Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7998 5550..5795 -
1681464071.0357077-CDS-Ecto-sp13_S_contig7998:5961..60831681464071.0357077-CDS-Ecto-sp13_S_contig7998:5961..6083Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7998 5962..6083 -
1681464071.0459409-CDS-Ecto-sp13_S_contig7998:6280..67421681464071.0459409-CDS-Ecto-sp13_S_contig7998:6280..6742Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7998 6281..6742 -
1681464071.0559845-CDS-Ecto-sp13_S_contig7998:6936..70721681464071.0559845-CDS-Ecto-sp13_S_contig7998:6936..7072Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7998 6937..7072 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7998.19303.1

>prot_Ecto-sp13_S_contig7998.19303.1 ID=prot_Ecto-sp13_S_contig7998.19303.1|Name=mRNA_Ecto-sp13_S_contig7998.19303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=602bp
MVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRG
SVLPSQVQGCCESVVAHVSEVLFRKTRVCRISLNFKIDSRDRVWLLWSNS
IRLASEIPLGREPFTCVGGPINIGELVSNPGKTKGDEKHRNDRRSYPAVY
SSRCLCRVSLDQSEGQAGSVEESRRPRSHLTSIAFSGRLCISSNWPLRPA
HHREEIKSPAIGTCSSCGKTSSGSNFHAVHYKTIIAHFEQVVDLVSCDPA
NRTGVVEWPPSAEILEAAGGVGFGDISVATNADPSTIATEDVVVPPVIRS
LHPKLAAEGYERHRRDPLFLYKTAFVCESCFLVYAELASLAFRATGRQAL
TDHTISTQFSAMHRSHTLSRLKLKEDSWQPLPKKKSSMTRPMGSYNVPQQ
VSPELPKTIRREEDIIRNQAGRADSGSGVVENSGTRLDDIIRAREEDFFR
ELSAEEHTGTHPLMHMVASQQKLCSIGVPAHQVDPRAAMKKSRRAAKMSP
YERPQTLVEYTGRSDASALQTKSTHLHTTRKKVSLGDPRAGSNSSSGDKI
SSSAARHREFLDNTLSAVHEQLESTALADISGQGTPCAADDGQQSSLGWK
L*
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mRNA from alignment at Ecto-sp13_S_contig7998:4214..7075-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7998.19303.1 ID=mRNA_Ecto-sp13_S_contig7998.19303.1|Name=mRNA_Ecto-sp13_S_contig7998.19303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2862bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7998:4214..7075- (Ectocarpus species13 EcNAP12_S_4_19m)
GCAATGGTAAGGGCCATATGGTCTCCAAAGATGTGCTTATTGGAGAGGAG AGTGAACTGCCGCCAGCTCCACGACCGGCGCTACGGAATTTACGAGCGAG CTGTAACGTACGATGGCCCTGACATCTTCAGCACTGCCTGTGAGTCCTCC CGTAGAAACTACTTCATGCCACCAATCTGCCGGAAAATTGAATGCCGGCT CAGACGCGTGCTCAATGCGTACAGGAATCGTCTGCTGCGATTACCACGTG CTGCCGTGATATGATTGCGCATGTTTGGTTCATATTTGATAGACGCGTGC AATCATTGTCGTGCCGCTGTCGCCCTGTATCAGGTCCACTTCGAGGAAGC GTGTTGCCGTCGCAAGTACAAGGGTGTTGTGAAAGCGTTGTGGCGCATGT AAGTGAGGTACTGTTCAGGAAAACTAGGGTTTGTCGCATATCCCTCAACT TTAAGATCGACTCTCGGGATCGCGTGTGGCTGCTGTGGAGCAACTCCATC CGGCTTGCATCTGAGATTCCACTGGGGCGCGAGCCCTTCACGTGCGTGGG TGGCCCCATCAACATTGGAGAGCTGGTGAGTAATCCAGGAAAAACAAAAG GAGATGAAAAGCATCGGAACGACCGAAGAAGCTACCCTGCGGTGTATTCG TCCCGTTGTCTGTGCCGTGTATCTCTAGACCAATCGGAAGGTCAGGCAGG GAGCGTGGAAGAATCGCGTCGACCTCGATCGCATTTGACCTCGATCGCAT TTTCTGGCCGTCTGTGCATTAGTTCAAACTGGCCACTTCGACCCGGTTAG TAGTGCAGGCGTAGGTTCTAAAGCTGATGCCCCACGCGGCCCTCACCCAT ACGAAATAGTCATGCTGGAGGGCGACCCGTGGTGCTCGTGGCGGTGATGC GAACTGCGCTGCAGTCTACGTGACATCAAACGACGCATTTATTCTCCCAC AGGTGAAGATTCCGTCAGAAGTCACGCTGCAGCAAGGCGCAGCACATCAT CGTGAGGAGATCAAAAGCCCTGCTATCGGAACGTGCTCGAGCTGCGGCAA GACCTCATCGGGCAGTAACTTCCATGCTGTGCACTACAAAACAATAATCG CCCACTTTGAGCAGGTGACAAGGGTATCCAATTTCGAATAGACCAACCCA CGCGAAAGCAACATTGTAGCGAGACATTTCAGCCGCACGTGCATGTCCAT AGTAGGCAGGACGTCATATGCCCTCCTTGCGTCCGAGCAGAAGGCCATCT AGGTACAAACGCGCTCCTTTGTCCCAACAGGTGGTTGACCTCGTGTCTTG TGACCCGGCCAATCGAACGGGTGTCGTGGAGTGGCCGCCATCTGCAGAAA TATTGGAAGCGGCAGGTGGCGTCGGCTTTGGTGATATTTCTGTGGCGACG AATGCTGACCCATCAACGATAGCCACGGAGGATGTCGTCGTGCCCCCAGT AATACGCTCTCTGCACCCTAAACTCGCTGCCGAGGGCTACGAGCGCCACC GGCGGGACCCACTCTTCTTGTACAAGGTACCGTTGGACAGGTTTGCGCAA AATATGGTGTTGGTACGACCGCACTTCTTGTATGCTGAATCACGGATAGT TTGCGTTGGCAGCGCATGCGTAGTGGTCCTCTGCACTACTCCAGAGGAAG AATTTGTTTCCGGACAACATGCACTCGAGAATGCAAATCACGAGCAACAT CTGCTTTACCGCCGTATCTCTCTCCTTCGATACCGTTCGAAAGCAGACTG CGTTCGTTTGCGAGTCCTGCTTTCTCGTATACGCGGAACTGGCATCGCTC GCATTTCGGGCAACCGGCAGACAGGCCTTGACGGACCACACAATATCTAC GCAGTTTAGCGCCATGCATCGATCACACACGCTCAGCCGCTTGAAGCTGA AGGAGGATTCGTGGCAACCATTGCCGAAGAAGAAAAGCAGTATGACACGA CCAATGGGCAGCTACAACGTGCCTCAACAAGTCTCGCCTGAACTACCAAA AACAATACGAAGGTACGCGCAGGGCACCAAAAGACCAGGATAGTTGCCCT TCGTGACAGGGGCTTGTCGCAGGAACACGTCCTCTAGCTTCTGTAGCTTG TGAAGTGATTTTGGTCGATCCACCCACCGGAATACTGGTGAGTCTCCACT TGTTATATGAAGTTTAATTTGGTGCGTGGCCAAAGTATCCGCCATAATTT TTGTTTCTTCTATAACCTGCAGCTGCCCTAAATATGAAGCATCCAACCTT CCCGCCAATCACCCTGCATCTTCGTGGGCAGAGAGGAGGACATCATCAGG AACCAAGCGGGACGGGCGGATTCAGGCTCGGGGGTGGTCGAAAATTCAGG CACACGCCTGGATGACATAATCCGTGCCCGCGAGGAGGACTTTTTCCGTG AACTCAGTGCTGAGGAGCACACCGGCACTCACCCTTTGATGCATATGGTA GCGTCGCAGCAAAAACTTTGCAGCATTGGAGTGCCAGCTCATCAGGTGGA CCCTCGGGCAGCGATGAAAAAGTCAAGAAGGGCAGCTAAGATGAGCCCCT ATGAACGGCCGCAGACCCTGGTTGAGTATACCGGGCGATCTGATGCTTCC GCTCTACAAACGAAGTCTACACACTTGCATACCACAAGGAAAAAGGTATC GCTCGGGGATCCTCGAGCCGGCAGCAACAGCAGTAGCGGAGACAAGATCT CATCATCTGCAGCAAGGCATCGCGAATTTCTGGACAACACATTGAGCGCT GTCCACGAACAGCTAGAGTCAACCGCGCTTGCTGATATTAGTGGACAAGG AACACCTTGTGCCGCAGACGATGGGCAGCAAAGTAGTCTTGGGTGGAAGC TTTAAGACGTAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7998:4214..7075-

>mRNA_Ecto-sp13_S_contig7998.19303.1 ID=mRNA_Ecto-sp13_S_contig7998.19303.1|Name=mRNA_Ecto-sp13_S_contig7998.19303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1806bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7998:4214..7075- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTAAGGGCCATATGGTCTCCAAAGATGTGCTTATTGGAGAGGAGAGT
GAACTGCCGCCAGCTCCACGACCGGCGCTACGGAATTTACGAGCGAGCTG
TAACGTACGATGGCCCTGACATCTTCAGCACTGCCTGTCCACTTCGAGGA
AGCGTGTTGCCGTCGCAAGTACAAGGGTGTTGTGAAAGCGTTGTGGCGCA
TGTAAGTGAGGTACTGTTCAGGAAAACTAGGGTTTGTCGCATATCCCTCA
ACTTTAAGATCGACTCTCGGGATCGCGTGTGGCTGCTGTGGAGCAACTCC
ATCCGGCTTGCATCTGAGATTCCACTGGGGCGCGAGCCCTTCACGTGCGT
GGGTGGCCCCATCAACATTGGAGAGCTGGTGAGTAATCCAGGAAAAACAA
AAGGAGATGAAAAGCATCGGAACGACCGAAGAAGCTACCCTGCGGTGTAT
TCGTCCCGTTGTCTGTGCCGTGTATCTCTAGACCAATCGGAAGGTCAGGC
AGGGAGCGTGGAAGAATCGCGTCGACCTCGATCGCATTTGACCTCGATCG
CATTTTCTGGCCGTCTGTGCATTAGTTCAAACTGGCCACTTCGACCCGCA
CATCATCGTGAGGAGATCAAAAGCCCTGCTATCGGAACGTGCTCGAGCTG
CGGCAAGACCTCATCGGGCAGTAACTTCCATGCTGTGCACTACAAAACAA
TAATCGCCCACTTTGAGCAGGTGGTTGACCTCGTGTCTTGTGACCCGGCC
AATCGAACGGGTGTCGTGGAGTGGCCGCCATCTGCAGAAATATTGGAAGC
GGCAGGTGGCGTCGGCTTTGGTGATATTTCTGTGGCGACGAATGCTGACC
CATCAACGATAGCCACGGAGGATGTCGTCGTGCCCCCAGTAATACGCTCT
CTGCACCCTAAACTCGCTGCCGAGGGCTACGAGCGCCACCGGCGGGACCC
ACTCTTCTTGTACAAGACTGCGTTCGTTTGCGAGTCCTGCTTTCTCGTAT
ACGCGGAACTGGCATCGCTCGCATTTCGGGCAACCGGCAGACAGGCCTTG
ACGGACCACACAATATCTACGCAGTTTAGCGCCATGCATCGATCACACAC
GCTCAGCCGCTTGAAGCTGAAGGAGGATTCGTGGCAACCATTGCCGAAGA
AGAAAAGCAGTATGACACGACCAATGGGCAGCTACAACGTGCCTCAACAA
GTCTCGCCTGAACTACCAAAAACAATACGAAGAGAGGAGGACATCATCAG
GAACCAAGCGGGACGGGCGGATTCAGGCTCGGGGGTGGTCGAAAATTCAG
GCACACGCCTGGATGACATAATCCGTGCCCGCGAGGAGGACTTTTTCCGT
GAACTCAGTGCTGAGGAGCACACCGGCACTCACCCTTTGATGCATATGGT
AGCGTCGCAGCAAAAACTTTGCAGCATTGGAGTGCCAGCTCATCAGGTGG
ACCCTCGGGCAGCGATGAAAAAGTCAAGAAGGGCAGCTAAGATGAGCCCC
TATGAACGGCCGCAGACCCTGGTTGAGTATACCGGGCGATCTGATGCTTC
CGCTCTACAAACGAAGTCTACACACTTGCATACCACAAGGAAAAAGGTAT
CGCTCGGGGATCCTCGAGCCGGCAGCAACAGCAGTAGCGGAGACAAGATC
TCATCATCTGCAGCAAGGCATCGCGAATTTCTGGACAACACATTGAGCGC
TGTCCACGAACAGCTAGAGTCAACCGCGCTTGCTGATATTAGTGGACAAG
GAACACCTTGTGCCGCAGACGATGGGCAGCAAAGTAGTCTTGGGTGGAAG
CTTTAA
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