mRNA_Ecto-sp13_S_contig7995.19298.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7995.19298.1
Unique NamemRNA_Ecto-sp13_S_contig7995.19298.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: D7G4N5_ECTSI (3'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N5_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 5.480e-116
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 1 
Query:    1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 504
            MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAA S+GEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP
Sbjct:    1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A6H5KDM4_9PHAE (RNase_PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM4_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 3.240e-102
Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 1 
Query:    1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 504
            MAIREGPWQSKND++FILRSLRGGRR DGR+LGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRP EGFLHFNVELGPMAA SMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEK   LRCDVHILDHGGNLIDACTLATMAALRHFRRP
Sbjct:    1 MAIREGPWQSKNDYEFILRSLRGGRRVDGRELGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPMEGFLHFNVELGPMAAASMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEK---LRCDVHILDHGGNLIDACTLATMAALRHFRRP 165
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A835ZEC1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC1_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.070e-61
Identity = 105/169 (62.13%), Postives = 129/169 (76.33%), Query Frame = 1 
Query:    1 MAIREGPWQSKNDHDFILRSLRGGR-RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 504
            MAIR+G   + N + F+L +LRGG+ R DGR+L  +R +   F R+EGQAS  +Q GRT+ L VV+ EVVPP+PDRPT+G L FNVEL  MA  S+G  R SPL+ EI R+IE G+RDSQALDTE LCI+ GEKVWQLR DVHILD+GGNL+DA  LA +AAL+HFRRP
Sbjct:    1 MAIRDGFTHTINTNAFVLETLRGGKQRIDGRELNTLRQIAFQFTRSEGQASVLVQWGRTQTLAVVSAEVVPPYPDRPTDGALMFNVELSKMAEASVGLLRASPLATEITRIIERGIRDSQALDTETLCIVAGEKVWQLRVDVHILDNGGNLVDAAALAAIAALQHFRRP 169
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: K3X4Z2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4Z2_GLOUD)

HSP 1 Score: 193 bits (491), Expect = 2.020e-56
Identity = 96/171 (56.14%), Postives = 128/171 (74.85%), Query Frame = 1 
Query:    1 MAIREG-PWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 504
            MAIRE   + S+N+  F+  S+      RADGR+L   R +R+ F R E Q+ AE+QLGRTRV+  V GE+VPPFPDRPTEGFLHFNVEL PMA+ +    R SP++VE+AR+++ G+R+ +ALDTEAL II GEKVW + C++H++DHGGNLID  +LA +AA+ H+RRP
Sbjct:    1 MAIREEHDFLSENERKFLFDSIHDAPHVRADGRELMHQRKIRVQFRRTEEQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPMAVELARIVDRGIRECRALDTEALAIIAGEKVWAITCNIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A8K1C7Y8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y8_PYTOL)

HSP 1 Score: 192 bits (487), Expect = 5.790e-56
Identity = 95/171 (55.56%), Postives = 128/171 (74.85%), Query Frame = 1 
Query:    1 MAIREG-PWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 504
            MAIRE   + S+N+  F+  S+      RADGR+L   R +R+ F R + Q+ AE+QLGRTRV+  V GE+VPPFPDRPTEGFLHF+VEL PMA+ +    R SPL+VE+AR+++ G+R+ +ALDTEAL I+ GEKVW + C++H++DHGGNLID  +LA +AA+ HFRRP
Sbjct:    1 MAIREEYDFVSENERKFLFDSIHDKPHIRADGRELMQQRKIRVQFRRMDDQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFSVELSPMASQNFEVGRPSPLAVELARIVDRGIRECRALDTEALAIVAGEKVWSITCNIHVVDHGGNLIDCVSLAAIAAMMHFRRP 171
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A7S1CIZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIZ9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.240e-55
Identity = 91/158 (57.59%), Postives = 116/158 (73.42%), Query Frame = 1 
Query:   28 SKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRR 501
            S  + DFI  +LR GRR DGR L D R +   F R   + +AE++LG+TRV+ V T EVVPP+PDRPTEGFL FNVEL PMA+      R SPL+VEI R++E  +RD++A+DTEALCI+ GEKVW LRCDV ++D GGN+IDA  L+ +A+L HFRR
Sbjct:    4 SNVERDFIHHALRSGRRVDGRGLLDRRRVAFKFDRTAARTTAEVRLGKTRVVTVTTAEVVPPYPDRPTEGFLMFNVELSPMASEKFEAGRPSPLAVEIGRIVERCLRDARAIDTEALCIVAGEKVWSLRCDVRVVDDGGNIIDAAALSAVASLCHFRR 161
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: I2CP19_NANGC (Exosome complex component RRP45 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CP19_NANGC)

HSP 1 Score: 192 bits (487), Expect = 6.360e-55
Identity = 99/168 (58.93%), Postives = 122/168 (72.62%), Query Frame = 1 
Query:    4 AIREGPWQSKNDHDFILRSLRGGR-RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 504
             I++G   S N+ +FIL +L+    RADGR   D R LR+ +ARAEGQA+AEIQLG+TRVL VVT E+ PP+PDRP EGFL+ NVE  PMA + +   R +P  VE+ RVIE  +R S+ALDTEALC+I G KVW LRCDV ILD  GN++DA  LAT+AAL HFR P
Sbjct:    3 VIKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLP 170
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A2D4C8I4_PYTIN (Exosome complex exonuclease RRP45-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8I4_PYTIN)

HSP 1 Score: 189 bits (479), Expect = 9.770e-55
Identity = 92/171 (53.80%), Postives = 126/171 (73.68%), Query Frame = 1 
Query:    1 MAIREG-PWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 504
            MAIRE   + S+N+  F+  S+      R DGR+L   R +R+ F R + Q+ AE+Q+GRTRV+  V GE+VPPFPDRPTEGFLHFNVEL PMA+ +    R SPL++E+AR+++ G+R+ +ALDTEAL I+ GEKVW + C +H++DHGGNLID  +LA +AA+ H+RRP
Sbjct:    1 MAIREEHDFLSENERAFLFHSIHDKPHIRPDGRELMQQRKIRVQFRRNDDQSQAEVQIGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPLAIELARIVDRGIRECRALDTEALAIVAGEKVWSITCTIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A3M6VKF7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKF7_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.200e-53
Identity = 95/178 (53.37%), Postives = 129/178 (72.47%), Query Frame = 1 
Query:    1 MAIREG-PWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRN-------SPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 504
            MA+R+   + S+N+  F+   LR     RADGR+L   R +R+ F R+E ++ AE+QLGRTRV+G V GE+VPPFPDRPTEGFLHF+VEL PMA+ S     +       S ++ E+AR++E GVR+S+ALDTEAL ++ GEKVW + C VH++DHGGNL+DA +LA +AAL H+RRP
Sbjct:    1 MALRDDHDFLSENERQFLANCLRQSPHVRADGRELLQQRKIRVQFRRSESESQAEVQLGRTRVIGNVHGEIVPPFPDRPTEGFLHFSVELSPMASPSFDASSSASRGAASSVVAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRP 178
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BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: G4ZFL2_PHYSP (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZFL2_PHYSP)

HSP 1 Score: 184 bits (466), Expect = 1.310e-52
Identity = 98/178 (55.06%), Postives = 128/178 (71.91%), Query Frame = 1 
Query:    1 MAIR-EGPWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMA------AVSMGE-QRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 504
            MA+R E  + S+N+  F+   LR     RADGR+L   R +R+ F R+E ++ AE+QLGRTRV+G V GE+VPPFPDRPTEGFLHF VEL PMA      A S G    +S  + E+AR++E GVR+S+ALDTEAL ++ GEKVW + C VH++DHGGNL+DA +LA +AAL H+RRP
Sbjct:    1 MALRDEHDFLSENERQFLANCLRQPPHVRADGRELLQQRKIRVQFRRSETESQAEVQLGRTRVIGNVHGEIVPPFPDRPTEGFLHFAVELSPMASPSFEAAASAGRGAASSVAAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRP 178
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4N5_ECTSI5.480e-11698.813'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocar... [more]
A0A6H5KDM4_9PHAE3.240e-10294.64RNase_PH domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZEC1_9STRA1.070e-6162.13Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
K3X4Z2_GLOUD2.020e-5656.14Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1C7Y8_PYTOL5.790e-5655.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1CIZ9_9STRA1.240e-5557.59Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
I2CP19_NANGC6.360e-5558.93Exosome complex component RRP45 n=3 Tax=Monodopsid... [more]
A0A2D4C8I4_PYTIN9.770e-5553.80Exosome complex exonuclease RRP45-like protein n=1... [more]
A0A3M6VKF7_9STRA1.200e-5353.37Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
G4ZFL2_PHYSP1.310e-5255.06Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7995contigEcto-sp13_S_contig7995:3472..7066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score337.8
Seed ortholog evalue2.9e-90
Seed eggNOG ortholog2880.D7G4N5
Model size504
KEGG koko:K03678,ko:K10397,ko:K12589
KEGG Pathwayko03018,map03018
KEGG ModuleM00390,M00391
Hectar predicted targeting categoryother localisation
GOsGO:0000175,GO:0000176,GO:0000177,GO:0000178,GO:0000184,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016075,GO:0016078,GO:0016180,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017091,GO:0019222,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0031974,GO:0031981,GO:0032991,GO:0034427,GO:0034470,GO:0034472,GO:0034473,GO:0034475,GO:0034476,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0070478,GO:0070481,GO:0070651,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071035,GO:0071038,GO:0071042,GO:0071046,GO:0071047,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354
Exons4
EggNOG free text desc.U1 snRNA 3'-end processing
EggNOG OGsCOG2123@1,KOG1614@2759
Ec32 ortholog descriptionRrp45 is a component of the exosome 3'->5' exoribonuclease complex, a complex that degrades mRNAs.
Ec32 orthologEc-17_001830.1
Cds size504
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464070.7218692-CDS-Ecto-sp13_S_contig7995:3471..35761681464070.7218692-CDS-Ecto-sp13_S_contig7995:3471..3576Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7995 3472..3576 -
1681464070.7331944-CDS-Ecto-sp13_S_contig7995:3950..40581681464070.7331944-CDS-Ecto-sp13_S_contig7995:3950..4058Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7995 3951..4058 -
1681464070.7456412-CDS-Ecto-sp13_S_contig7995:4651..47411681464070.7456412-CDS-Ecto-sp13_S_contig7995:4651..4741Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7995 4652..4741 -
1681464070.7581968-CDS-Ecto-sp13_S_contig7995:6865..70661681464070.7581968-CDS-Ecto-sp13_S_contig7995:6865..7066Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7995 6866..7066 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7995.19298.1prot_Ecto-sp13_S_contig7995.19298.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7995 3472..7066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7995.19298.1

>prot_Ecto-sp13_S_contig7995.19298.1 ID=prot_Ecto-sp13_S_contig7995.19298.1|Name=mRNA_Ecto-sp13_S_contig7995.19298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp
MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQAS
AEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRN
SPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNL
IDACTLATMAALRHFRRP
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mRNA from alignment at Ecto-sp13_S_contig7995:3472..7066-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7995.19298.1 ID=mRNA_Ecto-sp13_S_contig7995.19298.1|Name=mRNA_Ecto-sp13_S_contig7995.19298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3595bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7995:3472..7066- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGATACGCGAGGGGCCGTGGCAGAGCAAGAATGACCACGACTTCAT
CCTTCGATCCTTGCGGGGCGGGCGCCGGGCGGACGGGAGGCAGCTCGGAG
ACATGCGGCTGTTGCGTATGGTGTTCGCTCGCGCGGAGGGGCAGGCCAGC
GCCGAGATTCAGCTAGGGCGAACGCGAGTGCTGGGCGTTGTCACGGGCGA
GGTACGAGGCACGGGTGGCAGTATGCAGTGTAGTGCTCTGGCGCAATGAT
CCAATCAATGTGTCAATGTACCTGCTTACCACAACAATAGCATTTGTTTT
GTGTTCGCATGCGGCGGAAATGGGGCTAGCCGTATGGAGGTGTGCCTGGC
ATCTTTTGGCCACTCCGCTACAAAGGGACGCGAAGCTACATAGCAGGGCG
TCAACGTTGCTGTTCACTCATGGCTACCGCACTCCGACGGCGTGTGTCAT
CATGACTCCCTAGGAGTTGCGGGCGACACAAGCAGCCAAGGCGCCATCTA
CAGCGTAGTGTACAGTAGGTTGCACAAGATACCACACCCCCGTGACCAAA
GCTGGATGAATCCATTAGCACGAGGATGTCGATATCGAATGATGCAGCAC
GTTTTCGGAAAGCTCTCGACGGGAGGGTTCCAACACCGCCATTTTCGGCA
CCATCACTGCGTTTTCTGTCGAGCAATCGAGTTTTGAAAATTGGTCCAGG
GGGTGTGATATCTCGTGCAACCTATGGTAGTCCTTCCACAGCGAAATTTG
TATTTGCTGTCTGTGGTGAGACTACGGCTGTACAGTAGACGGTGCCTCAG
CTGGGTGTCGCTCACAACTTCCAGAGAGTCGCCATAACGCAAGCCGTATG
TTGCGGAAGTTAAGCAATGTAACTGGTTGAAATAGCAGAAGCAACAGAGT
TGAGGTACTCCTTCCTGATGACTACTGTACGCTACCGGGCAGCGGCGCGG
CCAGATTCTGCCAGTTATTTTTGAGACACCCTCCTCACTGTTTTCTGCAT
TCCCGTTAAGCGAGAATCGCGGGCTGTGCAAAGCAGTCTTGGGTTGTAGG
AACAGAGAGAGAGGTGCAGCCACTATGCAGTAGCTGAAGTAGGAACATCA
TGATGATGGCAATTTCATGCTGAAGTTGAGAGGGTGTTGTGAAACCAGTT
TATAGGCGTTTTGGGGTTCCTCACAACTTCAGAGAGGAAGTCCGGTCCTG
GACGGTGTGGCTACCTTAGAACCTATGCGTATAACCTTTAGTTCGCCGTT
CTTCCTCTCTCTCTGCCCCACCCCTTGCCAAGGGCTGGTGATTTTGATGG
TCTTCGGCCTTCTTGGGCTGCTTGATATTTGGGTCCCTCCTGCCCGCGAG
ATGCCTTGTGGAACACGGCACGCACAAGAGGCGCGAGATACCGTAAAAGT
GCGGGCGAGCGCACTACAGGTGTCCGATGCCGATTTGTTAGCGCTCGATT
GCTCCTTAACCATGAAGCTGGCAAATCCGACAAGGTTGAGCTTGGAAAAA
CATCGTCGAGAGCTAGCATTTCCTCGCACGCGTCAGTCGGGCTTCGTATC
CTCATGGTTCTACAGCAATCGGTGTACTGGTGTACAATTCTGCCATACAC
CTGTGCACTCGTCCTCCCACACTCTCGCGGTATCTACCTCACTCTTCGCG
GTATCTACCGACAACACGATCCCGATAATTTGTCTCACCAGAAAAGAGTT
TTTTTTTCGTCGTCCCGTCCCATTTCCTTTCCACAACCGATCGCGGGTCG
TCTCAACTGGAGAGAGAGAGAGAGCTCCTGTGCGAAGTTACATGAAAGAT
TTTCCCGGTACAGCTGTTGTTCTCCGTCAACAACCTCAAGCCGATATGTC
CATTCTTAAATTACACTTGATCGATTTGGAGATGATTTGTCAGGCCTGAC
TCGAGCTTTCACCTCAAGAAAACATAACAGTTTTCACGGCTCGAGGTTCA
CGACAGCAAACACCTCCATTGAACCTGGTTTTCTGAGGTTGGTAGACCAC
GATTTTGTTCCGCGAGACGAAATCGTGTTCAGCAGCAGGTGTGCCCCTCG
TTGCCCTTGTATAATGGACTTAGTATGGGCACACATAATCCTCCATGCAC
TTCTTACTATATGGAATACTGCTGTGATTCTAAAGCCTACACGATATGGA
ATACAAGACTTTACTACGCGTACGCCCACTACAACAAACGCCTGGACCAA
ACTAGATTGGGCGCCCGAAAAACCGAGTGGGGGGGGGGGGTAGCAGTGCA
CCCATTTTTTAAGCCGCGAGACCCCTTGACTCTGCGTCCCGCCGGTGGGC
TAATATGTTTTGTCGGGAACACCAGGTGGTCCCGCCTTTTCCGGATAGGC
CCACGGAAGGCTTCCTTCACTTCAATGTCGAGCTAGGGCCGATGGCTGCC
GTCAGCATGGGGGAGGTGCGTCTTTGTCTCTTTTGGGAACGCAAGTGCTG
TTGCCAGAACTCACTCCGCTGCTCCCTTATCTCAGCATCATTTGTGGAAT
CCCCCTTGATACCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGTCGAG
GTACTCTTACTTTTCTGCTGTTCGACTTTCGACTTATTTCGGTTTGTTTT
CTGCTTGTCCGCCGAGTATCATAGGCGTACCTTGCTCTTGGCCGGTGGGA
TTATTTTGTCGCCCCCACATTCCCTAAGCGTTTGCTTTTGTTAAAGCGGC
GGCGTCTTCGGCGCTTGTCGTCATCCGATGCTGATACATGAAACCCTGCC
CCCCCCTCTCCTCCACGCTATATTCGAGACTTCTTCGAACCAACCAAGTC
GGCGTTGTCCTTGTTATTGTTGTTGTTGTAATCATCTTGACATCAAAAAC
CGTTCCGATATCTGCTCAGTACCGTTTTATATCCGTACCAGTTCAACTGA
CGCGAACGATTTCTGTGGTCAAAGGCCAGCAACCCAAATTCAGTACTAAC
GTCTGTGCGCGTTGCTCTTCTCGTCTTGTGCGCGTTGCTCTTCTTTCCCC
CGCTTCAGCAACGCAATTCCCCGTTGTCGGTGGAGATCGCGCGGGTGATC
GAGATCGGAGTGAGGGACTCACAGGCCCTTGACACAGAAGCGCTTTGTAT
CATTGGTGGCGAGAAGGTAGGCATGCATTCTCTCTTCGCTCTCTCGAGCT
AGTTTTACCCCCCGTTTGTTTTGCGCGAGATATTGATACGGAAGCGCTTT
CCTTCATCATCGGCGGCGAGAAGCTATTCAGCGACCCTCCAAGCTGTCTT
CACTACCATAGTTACCTATTTATTTTGTTTACACGAGATTGACTGGATAA
CCGTTATCTATCTTAACTCGATGTACATGGGTATTGGCAACGATTTTGGA
AAATTTCTGTTAGTAAACAGTGTCGGGTGCAACATATCATGTTGTGGAAA
CCCTCGTGAAATTTCCTTTCTGGCCATGTGCGTGCACGCCCGCCTTGACG
ACCCCCTCCCCCCGTCCCCTGTCCCACTCTCTATGAAAAGGTTTGGCAGC
TGCGGTGCGACGTGCACATCCTTGATCACGGGGGGAACTTGATTGACGCC
TGCACGCTGGCCACGATGGCCGCACTCCGACATTTCCGACGACCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7995:3472..7066-

>mRNA_Ecto-sp13_S_contig7995.19298.1 ID=mRNA_Ecto-sp13_S_contig7995.19298.1|Name=mRNA_Ecto-sp13_S_contig7995.19298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7995:3472..7066- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGATACGCGAGGGGCCGTGGCAGAGCAAGAATGACCACGACTTCAT
CCTTCGATCCTTGCGGGGCGGGCGCCGGGCGGACGGGAGGCAGCTCGGAG
ACATGCGGCTGTTGCGTATGGTGTTCGCTCGCGCGGAGGGGCAGGCCAGC
GCCGAGATTCAGCTAGGGCGAACGCGAGTGCTGGGCGTTGTCACGGGCGA
GGTGGTCCCGCCTTTTCCGGATAGGCCCACGGAAGGCTTCCTTCACTTCA
ATGTCGAGCTAGGGCCGATGGCTGCCGTCAGCATGGGGGAGCAACGCAAT
TCCCCGTTGTCGGTGGAGATCGCGCGGGTGATCGAGATCGGAGTGAGGGA
CTCACAGGCCCTTGACACAGAAGCGCTTTGTATCATTGGTGGCGAGAAGG
TTTGGCAGCTGCGGTGCGACGTGCACATCCTTGATCACGGGGGGAACTTG
ATTGACGCCTGCACGCTGGCCACGATGGCCGCACTCCGACATTTCCGACG
ACCA
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