mRNA_Ecto-sp13_S_contig79943.19297.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 394 bits (1013), Expect = 1.140e-135 Identity = 201/204 (98.53%), Postives = 201/204 (98.53%), Query Frame = 1
Query: 4 VLLEAGADINSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIH 615
VLLEAGAD NSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTP ALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAI WACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIH
Sbjct: 93 VLLEAGADFNSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAILWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIH 296
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 4.980e-135 Identity = 199/205 (97.07%), Postives = 201/205 (98.05%), Query Frame = 1
Query: 1 CVLLEAGADINSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIH 615
CVLLEAGAD NSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTP LNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGE+NRRKWAECRLRDGTPLHLAAAWVSVR +H
Sbjct: 147 CVLLEAGADFNSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMH 351
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE) HSP 1 Score: 122 bits (305), Expect = 5.200e-30 Identity = 80/201 (39.80%), Postives = 115/201 (57.21%), Query Frame = 1
Query: 7 LLEAGADINSRDGAGETPLM----LTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAA 591
LL+AGAD N+ D G TPLM L AD ++ REL + GA P ++ +GM A+H A+ + +V+ ++L LN G TP+ AA G + +V LLS GASD L + +A+ A G +VR++L+HG++ VGGLGA+P +I A + AKIL ML++ GEE RR+WA + T LH A +
Sbjct: 101 LLDAGADPNAADATGHTPLMQACRLFGAADRYVVV-RELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLDHGMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYNESTLLHCATS 300
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI) HSP 1 Score: 107 bits (267), Expect = 6.330e-24 Identity = 80/206 (38.83%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 7 LLEAGADINSRDGAGETPLMLTALADTGAL----LARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLA-LNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFW--ACDGGHPRMVRMML-EHGINRVGGLGAI-PNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPL-HLAAAW 594
L++AGAD+N R+ G TPLM+ D LAREL K G + +ADG +A+H AA GN ++ +L+ L+ LN+ G TP+ +A V LLSAGAS G+ E N + A G+ ++R++ E G++ VGG A+ PNS+ A + +A+IL +L++AEG+E + WA RL G PL +LAAA+
Sbjct: 101 LIKAGADLNGRNYQGCTPLMMACRVDKEGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAY 306
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 108 bits (270), Expect = 7.370e-24 Identity = 71/213 (33.33%), Postives = 109/213 (51.17%), Query Frame = 1
Query: 4 VLLEAGADINSRDGAGETPLMLTALADTGA------LLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQ--AKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRA 609
+LL+AGAD +S +G G TPLMLT + + A ++ARE +A+ AA ++ ++L P LN G TP+ AA+ G+ +AV HLLSAGA ++ + A H +VR++L + G+ +GG IP ++G A R+ A I+ ML+SAEG E WA CR ++ LH A ++ ++ A
Sbjct: 207 LLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISA 419
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE) HSP 1 Score: 106 bits (264), Expect = 4.790e-23 Identity = 70/213 (32.86%), Postives = 109/213 (51.17%), Query Frame = 1
Query: 4 VLLEAGADINSRDGAGETPLMLTALADTGA------LLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQ--AKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRA 609
+LL+AGAD +S +G G TPLMLT + + A ++ARE +A+ AA +++ ++L P LN G TP+ AA+ G+ +AV HLLSAGA ++ + A H +VR++L + G+ + G IP ++G A R+ A I+ ML+SAEG E WA CR ++ LH A ++ ++ A
Sbjct: 215 LLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISA 427
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 103 bits (256), Expect = 2.420e-22 Identity = 79/210 (37.62%), Postives = 112/210 (53.33%), Query Frame = 1
Query: 4 VLLEAGADINSRDGAGETPLMLTAL----ADTGALLARELFKVGASPFVKNADGM-SAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNA--AIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTP-LHLAAAWVSVRA 609
+LL AGAD N DG G TPLM+T L A L A +A+HVAA +++ ++L+ P +N+ + KG T + AA G AV LLSAGA D N ++ A + GH ++VR++L+ G+ VGG A+ ++ ++ R +IL+ML+ EGE+ R KWA R DGTP LHLAAA S+ A
Sbjct: 105 LLLLAGADPNLADGKGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVA 314
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: A0A5F8G5Y9_MONDO (Euchromatic histone lysine methyltransferase 2 n=2 Tax=Didelphinae TaxID=126287 RepID=A0A5F8G5Y9_MONDO) HSP 1 Score: 73.6 bits (179), Expect = 1.130e-11 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 4 VLLEAGADINSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGAS-DLGVDEQNAAIFWACDGGHPRMVRMMLE 414
VLL+AGA+IN+ D TPLM A+A+ AR + + G + K DG + +H AA +GNLE+++++L+ + +N DN G+TP+ AA + LL+ GA L +E+N + WA G + ++L
Sbjct: 456 VLLQAGANINAVDKLQRTPLM-EAVANNHVEAARYMVQRGGCVYSKEEDGSTCLHHAAKIGNLEMVSLLLSTGQVDVNAQDNGGWTPIIWAAEHKHIEVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLLN 592
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: T1IV76_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IV76_STRMM) HSP 1 Score: 70.1 bits (170), Expect = 1.760e-10 Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 4 VLLEAGADINSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGAS-DLGVDEQNAAIFWACDGGHPRMVRMMLE 414
VL +AGA ++ D TPL + A+ + ++ R L + G + + DGM++MH+AA +GNLE L +N+LD+ G+TP+ + + V LL GA ++ +EQN A+ WA G + + L
Sbjct: 513 VLQQAGAKLDCVDDKLRTPLTV-AVENKQTVIIRYLIRAGVNLEARGEDGMTSMHIAAKMGNLEACRCFFETRKLNINLLDDGGWTPLVWGSEHRHKDVVRFLLECGADPNVRDNEQNIALHWAAFSGSSEICELFLN 649
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Match: F7BXJ6_MONDO (Euchromatic histone lysine methyltransferase 2 n=1 Tax=Monodelphis domestica TaxID=13616 RepID=F7BXJ6_MONDO) HSP 1 Score: 69.7 bits (169), Expect = 2.310e-10 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 4 VLLEAGADINSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGAS-DLGVDEQNAAIFWACDGGHPRMVRMMLE 414
VLL+AGA+IN+ D TPLM A+A+ AR + + G + K DG + +H AA +GNLE+++++L+ + +N DN G+TP+ AA + LL+ GA L +E+N + WA G + ++L
Sbjct: 330 VLLQAGANINAVDKLQRTPLM-EAVANNHVEAARYMVQRGGCVYSKE-DGSTCLHHAAKIGNLEMVSLLLSTGQVDVNAQDNGGWTPIIWAAEHKHIEVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLLN 465 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig79943.19297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig79943.19297.1 >prot_Ecto-sp13_S_contig79943.19297.1 ID=prot_Ecto-sp13_S_contig79943.19297.1|Name=mRNA_Ecto-sp13_S_contig79943.19297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp CVLLEAGADINSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADback to top mRNA from alignment at Ecto-sp13_S_contig79943:3..617- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig79943.19297.1 ID=mRNA_Ecto-sp13_S_contig79943.19297.1|Name=mRNA_Ecto-sp13_S_contig79943.19297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=615bp|location=Sequence derived from alignment at Ecto-sp13_S_contig79943:3..617- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig79943:3..617- >mRNA_Ecto-sp13_S_contig79943.19297.1 ID=mRNA_Ecto-sp13_S_contig79943.19297.1|Name=mRNA_Ecto-sp13_S_contig79943.19297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=615bp|location=Sequence derived from alignment at Ecto-sp13_S_contig79943:3..617- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |