mRNA_Ecto-sp13_S_contig7992.19294.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: D7FYB8_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB8_ECTSI) HSP 1 Score: 308 bits (788), Expect = 1.680e-99 Identity = 201/275 (73.09%), Postives = 212/275 (77.09%), Query Frame = 3
Query: 57 MVGSDAVIGLPEELTVMEYDLTSKAIAGVVPSATQAITGGSLSQDASGTTLSFTRPLAPTNKQAISGTPGDETIFIYAFGGDNEFAFHGLAPNRGSLVLDLFCGDG----DGATVVGTSAPTLGGTPASSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPLLDRTTAPAAIASSGGGDSDSATAGLVAGMLVVXXXXXXXVAVVLLFKTGRLKPCRHGTPNGPSPVVGSIPAAAPSVTSNAMERTQLPAAIQYPEALHP 869
M+GSDAVIGLP+E TV EYDLTS+ A V SATQ ITGG +SQDASGTTLSFTRPLAPTNKQAISGTPGDETIF++AFG DNE +HGL PNRGSLVLDLFCGDG D TVVGT APTLGG XXXXXXXXXXXXXXXXXXX LSPLLD TTAPA IASSG GDSDSAT GLVAG+L V XXXXXX AVV+LFKTGRLK CRHGTPNGPSP +GSIPAAAPS TS+AME QLP AIQYPE LHP
Sbjct: 1 MIGSDAVIGLPDESTVEEYDLTSQTTARVFSSATQDITGGLVSQDASGTTLSFTRPLAPTNKQAISGTPGDETIFLFAFGADNELGYHGLPPNRGSLVLDLFCGDGGDGSDDVTVVGTPAPTLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXIVELEIPPPSAPSTAPTALLTLSPLLDGTTAPATIASSGRGDSDSATVGLVAGVLGVGXXXXXXGAVVVLFKTGRLKSCRHGTPNGPSPGMGSIPAAAPSATSSAMEGIQLPPAIQYPEVLHP 275
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: D7FJ76_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ76_ECTSI) HSP 1 Score: 234 bits (597), Expect = 2.730e-69 Identity = 120/150 (80.00%), Postives = 130/150 (86.67%), Query Frame = 3
Query: 3 VLSMALAWTSLGFSSDSFMVGSDAVIGLPEELTVMEYDLTSKAIAGVVPSATQAITGGSLSQDASGTTLSFTRPLAPTNKQAISGTPGDETIFIYAFGGDNEFAFHGLAPNRGSLVLDLFCGDG---DGATVVGTSAPTLGGTPASSAAS 443
V+S A+AWTSLGFSSD M+GSDAVIGLP+E V EYDL S+ AGV+PSATQ ITGGS+SQDASGTTLSFTRPLAP NKQAISGTPGDETIF+YAFGGDNE FHGLAPNRGSLVLDLFCGDG DGATV GT APT+GGTP +S AS
Sbjct: 64 VVSTAVAWTSLGFSSDLMMIGSDAVIGLPDESAVEEYDLISQTTAGVLPSATQDITGGSVSQDASGTTLSFTRPLAPANKQAISGTPGDETIFLYAFGGDNELGFHGLAPNRGSLVLDLFCGDGGDGDGATVAGTPAPTVGGTPTASEAS 213
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: A0A6H5JN46_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN46_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.330e-62 Identity = 116/148 (78.38%), Postives = 123/148 (83.11%), Query Frame = 3
Query: 3 VLSMALAWTSLGFSSDSFMVGSDAVIGLPEELTVMEYDLTSKAIAGVVPSATQAITGGSLSQDASGTTLSFTRPLAPTNKQAISGTPGDETIFIYAFGGDNEFAFHGLAPNRGSLVLDLFCGDG-DGATVVGTSAPTLGGTPASSAAS 443
V+S A+AWTSLGFSSD MVGSDAVIGLPEE TV EYDLTS A+AGVV S+TQ ITGGS+SQDASGTTLSFTRPLAP NKQAISGTPGDETIFIYAFG NE AFHG APNRG L LDLFCG+G DGATV GT APT +S AS
Sbjct: 64 VVSTAVAWTSLGFSSDLSMVGSDAVIGLPEESTVEEYDLTSHALAGVVLSSTQDITGGSVSQDASGTTLSFTRPLAPANKQAISGTPGDETIFIYAFGEGNELAFHGQAPNRGDLTLDLFCGEGGDGATVAGTPAPTXXXXXXASEAS 211
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: D7FXV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV8_ECTSI) HSP 1 Score: 104 bits (260), Expect = 8.650e-21 Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = 3
Query: 564 LSPLLDRTTAPAAIASSGGGDSD--SATAGLVAGMLVVXXXXXXXVAVVLLFKTGRLKPCRHGTPNGPSPVVGSIPAAAPSVTSNAMERTQLPAAIQYPEAL 863
LSPL + TT PA +ASSGGGD+ S AG V G LVV AVVLLFKTGRLKPC + + PSP VGSIPA APS TS+A+ TQLPAA+QYPEAL
Sbjct: 336 LSPLPEGTTTPATVASSGGGDTSTMSVVAGAVGGGLVVGAI----AAVVLLFKTGRLKPCGNDNSSEPSPGVGSIPAGAPSATSSAIAGTQLPAAMQYPEAL 433
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: A0A6H5JSH0_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSH0_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 3.450e-17 Identity = 64/153 (41.83%), Postives = 87/153 (56.86%), Query Frame = 3
Query: 3 VLSMALAWTSLGF-SSDSFMVGSDAVIGLPEELTVMEYDLTSKAIAGVVPSATQAITGGSLSQDASGTTLSFTRPLAPT-NKQAISGTPGDETIFIYAFGGDNEFAFHGLAPNRGSLVLDLFCGDGDGATVVGTSAPTL-----GGTPASSAA 440
+++ +AW+ +GF S+D +VGSD +IGLP++ +V+EY++ + VV Q IT S+ Q TTLSF RPL+P NKQ IS GD T FI+ G DN+ G V DL+CG G A + T APT+ G TPA AA
Sbjct: 1 MVTSTVAWSGIGFPSTDLDLVGSDVIIGLPDDPSVLEYEVLGETAEEVVVFEQQDITEASVVQADGSTTLSFIRPLSPGGNKQNISYEAGDTTKFIFGQGADNDLGVISDVTWSGMRV-DLYCGTGGIAALARTPAPTVVGGGTGETPAPVAA 152
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: D7FJ77_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ77_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 1.510e-16 Identity = 63/153 (41.18%), Postives = 84/153 (54.90%), Query Frame = 3
Query: 3 VLSMALAWTSLGFSS-DSFMVGSDAVIGLPEELTVMEYDLTSKAIAGVVPSATQAITGGSLSQDASGTTLSFTRPLAPT-NKQAISGTPGDETIFIYAFGGDNEFAFHGLAPNRGSLVLDLFCGDGDGATVVGTSAPTL-----GGTPASSAA 440
+++ ++AW +GF S D +VGSD +IGLP+ +V+EY++ + VV Q IT S+ Q TTLSF RPL+P NKQ IS GD T I+ G DNE G V DL+CG G A + T APT+ G TPA + A
Sbjct: 63 MVTSSVAWAGIGFPSVDLDLVGSDVIIGLPDNSSVLEYEVLGETAEEVVVFEQQDITEASIVQADGSTTLSFIRPLSPGGNKQNISYVAGDATKLIFGQGADNELGVISDVTWSGMRV-DLYCGTGGIAALARTPAPTVVGGGTGETPAPTLA 214
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: A0A6H5K4G7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G7_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 1.900e-15 Identity = 56/100 (56.00%), Postives = 64/100 (64.00%), Query Frame = 3
Query: 567 SPLLDRTTAPAAIASSGGGDSDSATAGLVAGMLVVXXXXXXXVAVVLLFKTGRLKPCRHGTPNGPSPVVGSIPAAA-PSVTSNAMERTQLPAAIQYPEAL 863
SPL D TT PA +ASSGGG GLV G + + ++LLFKTGRLK CR+G +GPSP VG IPAAA PS +A QLPAAIQYPEAL
Sbjct: 278 SPLPDITTTPATVASSGGGFGG----GLVVGAIAI---------LILLFKTGRLKHCRNGNSHGPSPGVGQIPAAAGPSAMESARRGMQLPAAIQYPEAL 364
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: A0A6H5JKV6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV6_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 2.290e-15 Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 3
Query: 24 WTSLGFSSDSFMVGSDAVIGLPEELTVMEYDLTSKAIAGVVPSATQAITGGSLSQDASGTTLSFTRPLAPTN--KQAISGTPGDETIFIYAFGGDNEFAFHGLAPNRGSL-VLDLFCGD 371
+ LGFSS MV +DAV+GLP+E T +EYDL++ A++ TQ I+G S++Q S TTL FTRPL+P + K +S G++ FI+A+G N F +H RG V DL C +
Sbjct: 69 FVGLGFSSTGAMVPADAVVGLPDEGTALEYDLSTYALSSDNEHETQEISGASVTQADSTTTLVFTRPLSPADDSKTVLSAEEGEKATFIWAYGSSNTFQYH---EARGDFTVSDLLCSE 184
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: D7G7I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I5_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 7.270e-14 Identity = 56/101 (55.45%), Postives = 64/101 (63.37%), Query Frame = 3
Query: 570 PLLDRTTAPAAIASSGGGDSD--SATAGLVAGMLVVXXXXXXXVAVVLLFKTGRLKPCRHGTPNGPSPVVGSIPAAA-PSVTSNAMERTQLPAAIQYPEAL 863
PL D TT PA +ASSGGGD S A V G LVV ++LLFKTGRLK CR+G+ +G S VG IPAAA PS +A Q+PAAIQYPEAL
Sbjct: 244 PLPDITTTPATVASSGGGDPSTMSVVAVAVGGGLVVGAI----ATLILLFKTGRLKHCRNGSSHGTSRGVGPIPAAAGPSAMESARRGMQIPAAIQYPEAL 340
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Match: A0A7S2SLX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLX0_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.290e-12 Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 3
Query: 21 AWTSLGFS-SDSFMVGSDAVIGLPEELTVMEYDLTSKAIAGV--VPSATQAITGGSLSQDASGTTLSFTRPLAPTNKQAISGTPGDETIFIYAFGGDNEFAFHGLAPNRGSLVLDL 359
AW +LG S S MVGS+ V+GLP + TV++YDLT ++ +GV P+ Q + G L Q TT+ F++ L + + AI G E F+YA+G N A H RG++V+DL
Sbjct: 37 AWVALGVSDSGGLMVGSEVVLGLPNDGTVLKYDLTERSASGVEEAPTVRQTLNGTVLVQSGGVTTMQFSKLLEESGEIAIDGR--GENTFVYAYGSGNSLAVH---EGRGAVVVDL 147 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7992.19294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7992.19294.1 >prot_Ecto-sp13_S_contig7992.19294.1 ID=prot_Ecto-sp13_S_contig7992.19294.1|Name=mRNA_Ecto-sp13_S_contig7992.19294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp MALAWTSLGFSSDSFMVGSDAVIGLPEELTVMEYDLTSKAIAGVVPSATQback to top mRNA from alignment at Ecto-sp13_S_contig7992:1500..3752+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7992.19294.1 ID=mRNA_Ecto-sp13_S_contig7992.19294.1|Name=mRNA_Ecto-sp13_S_contig7992.19294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2253bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7992:1500..3752+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7992:1500..3752+ >mRNA_Ecto-sp13_S_contig7992.19294.1 ID=mRNA_Ecto-sp13_S_contig7992.19294.1|Name=mRNA_Ecto-sp13_S_contig7992.19294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7992:1500..3752+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |