mRNA_Ecto-sp13_S_contig799.19292.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 197 bits (500), Expect = 5.570e-53 Identity = 202/351 (57.55%), Postives = 234/351 (66.67%), Query Frame = 2
Query: 2 KELQLASLEFCIACRSYQTLHLNVDATTPRRLLAAADTPPPRPKRLCGRRLPRLQARRVTWNMPTEAELRNPISAMTDIDHLQFGRWFGGSLEAVAWPRRLKTIDMH-ESHFDKPIDLVQWPASLQRLRVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCY---DDHVDDQAEVYAXXXXXXXXXXXXXXXXXXXLGEKFNQSLLGLGTWMPNLEAFRLLDQINYSRTPNSLLRGIEWPKGLNQLTVLKESNLDGVVIPPTVQVVYRDN 1042
KELQLASL+FCIACR+ QT+HLNVD PRRLLA+AD PPP PKRLC R+PRL++RRVTWNMPT A+LR PI AMTD+++L+FG FG SLEAV WP L+T++ H +S FD+ I+LVQWP LQ + G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+ + ++A LG F QSL GLGTWMPNLE LL ++ LR IEWPKGL LT+L+ +++DGV IP VQV++ N
Sbjct: 73 KELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDFNQPIERVKFPASLQQLIFRTSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGNRLNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWCDEFAGNGMVIFANFDQPIGSSVGPALLRRLVLGHMFRQSLQGLGTWMPNLEVLHLLHYHGSGLGDSNFLREIEWPKGLRHLTLLEGTSIDGVDIPLAVQVLFAYN 423
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 189 bits (481), Expect = 4.280e-51 Identity = 190/353 (53.82%), Postives = 215/353 (60.91%), Query Frame = 2
Query: 2 KELQLASLEFCIACRSYQTLHLNVDATTPRRLLAAADTPPPRPKRLCGRRLPRLQARRVTWNMPTEAELRNPISAMTDIDHLQFGRWFGGSLEAVAWPRRLKTIDMH----------ESHFDKPIDLVQWPASLQRLRVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYD--DHVDDQAEVYAXXXXXXXXXXXXXXXXXXXLGEKFNQSLLGLGTWMPNLEAFRLLDQINYSRTPNSLLRGIEWPKGLNQLTVLKESNLDGVVIPPTVQ 1024
KE QLASLEFCIACR++QTL L VD+ TPRRLLAAAD PPP PKRLCG R+PRL+ARRVTW++PT A LRN I +M D D L+F R F SLEAVAWPRRLKT+++ +S FD+PI V WP +L++L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX C+ V V + X LG+ F QSL LGTWMPNLE F LL I+ S T +S LRGIEWPKGL QL V + S+L GVVIP TV+
Sbjct: 34 KERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKTVEVSGIAEVAKFHDKSLFDQPIAGVVWPDTLEQLTFG-----------------------------------------------LFLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVCFGVRQEVLGDVVVTSKFNRXIGASAWPKAMHRLTLGQNFRQSLQELGTWMPNLETFHLLHHIHDSGTEDSFLRGIEWPKGLRQLAVCRLSSLAGVVIPSTVE 339
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 169 bits (427), Expect = 4.390e-45 Identity = 84/132 (63.64%), Postives = 101/132 (76.52%), Query Frame = 2
Query: 2 KELQLASLEFCIACRSYQTLHLNVDATTPRRLLAAADTPPPRPKRLCGRRLPRLQARRVTWNMPTEAELRNPISAMTDIDHLQFGRWFGGSLEAVAWPRRLKTID-MHESHFDKPIDLVQWPASLQRLRVSG 394
KELQ ASLEFCIACR+Y +HL VD PR LLAAAD PPP PKRLC R+PRL+AR VTWNM AEL NPI A+TD+D L+FG F GSLEAV WPRRLK I+ ++ S F++P++L++WP SLQ L + G
Sbjct: 36 KELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVLGG 167
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 178 bits (452), Expect = 2.270e-44 Identity = 91/128 (71.09%), Postives = 103/128 (80.47%), Query Frame = 2
Query: 2 KELQLASLEFCIACRSYQTLHLNVDATTPRRLLAAADTPPPRPKRLCGRRLPRLQARRVTWNMPTEAELRNPISAMTDIDHLQFGRWFGGSLEAVAWPRRLKTIDMHE-SHFDKPIDLVQWPASLQRL 382
KELQLASLEFC+ACR+YQTLHL VD PR LLAAAD PP PKRL RR+PRL+AR VTWNMPT AELR+PI A+ D+DHL FG F GSLEAV WPRRL++I H S F+ PIDLV+WPASL+RL
Sbjct: 58 KELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKWPASLKRL 185
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE) HSP 1 Score: 172 bits (435), Expect = 6.080e-44 Identity = 242/389 (62.21%), Postives = 267/389 (68.64%), Query Frame = 2
Query: 2 KELQLASLEFCIACRSYQTLHLNVDATTPRRLLAAADTPPPRPKRLCGRRLPRLQARRVTWNMPTEAELRNPISAMTDIDHLQFGRWFGGSLEAVAWPRRLKTIDMH-ESHFDKPIDLVQWPASLQRLRVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC----------------------------------------------YDDHVDDQAEVYAXXXXXXXXXXXXXXXXXXXLGEKFNQSLLGLGTWMPNLEAFRLLDQINYSRTPNSLLRGIEWPKGLNQLTVLKESNLDGVVIPPTVQV 1027
KELQ ASLEFCIACR YQTL L VD TPR LLAA D P P KR C R+PRL+ARRV WNMPT EL++PI A+ D+ L FG F GSLE+VAWP+RLK ID S F++PI+ V++P SL LR+S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX ++ D A +++ XXXXXXXXXXXXXXX LG KF QSL GLGTW+PNLE F LD N S +SLLRGIEWP GL QL V ++S LDGV+IP TV+V
Sbjct: 12 KELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSLLELRLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYRSRXXXXXXXXXXXXXXXXXXXGEAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHESQGFDHAIMFSEFXXXXXXXXXXXXXXXLTLGHKFRQSLQGLGTWIPNLEIFHFLDHSNGSGDEDSLLRGIEWPTGLRQLAVFRDSRLDGVIIPSTVEV 400
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 166 bits (421), Expect = 1.040e-40 Identity = 81/128 (63.28%), Postives = 101/128 (78.91%), Query Frame = 2
Query: 2 KELQLASLEFCIACRSYQTLHLNVDATTPRRLLAAADTPPPRPKRLCGRRLPRLQARRVTWNMPTEAELRNPISAMTDIDHLQFGRWFGGSLEAVAWPRRLKTIDMHESH-FDKPIDLVQWPASLQRL 382
KELQLASLE C+ACR YQTLHL VDA TPRRLLAAAD P P PKRLCG R+PRL+ARR TWN+PT + +R I A D+D+L+FG+ F GSL+A+ WPRRLKTI+ +S ++ +D V WPASL+++
Sbjct: 158 KELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKV 285
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE) HSP 1 Score: 149 bits (376), Expect = 6.120e-35 Identity = 214/369 (57.99%), Postives = 234/369 (63.41%), Query Frame = 2
Query: 2 KELQLASLEFCIACRSYQTLHLNVDATTPRRLLAAADTPPPRPKRLCGRRLPRLQARRVTWNMPTEAELRNPISAMTDIDHLQFGRWFGGSLEAVAWPRRLKTIDMHESHFDKPIDLVQWPASLQRLRVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC--------------------------------YDDHVDDQAEVYAXXXXXXXXXXXXXXXXXXXLGEKFNQSLLGLGTWMPNLEAFRLLDQINYSRTPNSLLRGIEWPKGLNQLTVLKESNLDGVVIP 1012
KELQLASLEFC+ACR YQ L L VDA TPR LLAA D PPP KR C R+PRL+ARRV WNMPT ELR + A+ D++ L+FG F GSLEAV WP LK I S F++ ASLQ+L + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX +D + A + + LG KF +SL GLGT MPNLEAF LLD N S + +SL RGIEWPK L L V S+LDGVVIP
Sbjct: 39 KELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFSSEFNQXXXXXXXXASLQKLDLENSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLKEDVEXXXXXXXXXXXXXXXXXXEWATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHDGEGFENAVMLSAFNQRVDMCEWPVSMRRLTLGHKFKESLQGLGTRMPNLEAFHLLDHRNGSGSEDSL-RGIEWPKVLRHLVVFSNSSLDGVVIP 406
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI) HSP 1 Score: 127 bits (318), Expect = 9.180e-29 Identity = 73/136 (53.68%), Postives = 88/136 (64.71%), Query Frame = 2
Query: 2 KELQLASLEFCIACRSYQTLHLNVDATTPRRLLAAADTPPPRPKRLCGRRLPRLQARRVTWNMPTEAE------LRNP--ISAMTDIDHLQFGRWFGGSLEAVAWPRRLKTIDMHE-SHFDKPIDLVQWPASLQRL 382
KELQLASL FC ACR++QT+HL VD PRRLLAAAD PPP + R T + + E + P + AMTD+DHL+FG F G+LEAVAWPR LKTID+H S+F KPIDL++WP SLQ L
Sbjct: 158 KELQLASLGFCTACRNHQTVHLKVDEHIPRRLLAAADAPPPASEAAVS------DTRAPTHSASCDVEHADSSGIEEPCTVFAMTDVDHLEFGWDFEGNLEAVAWPRWLKTIDLHPWSNFGKPIDLIEWPDSLQTL 287
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI) HSP 1 Score: 123 bits (308), Expect = 1.030e-26 Identity = 65/95 (68.42%), Postives = 73/95 (76.84%), Query Frame = 2
Query: 2 KELQLASLEFCIACRSYQTLHLNVDATTPRRLLAAADTPPPRPKRLCGRRLPRLQARRVTWNMPTEAELRNPISAMTDIDHLQFGRWFGGSLEAV 286
KELQLASLEFC+ACR+YQTLHL VDA PRRLLA AD PPP P+ LC R+PRL+ARRVTW M AEL PI AMTD+D L+FG SLEA+
Sbjct: 135 KELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFGET---SLEAL 226
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Match: D8LCG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG0_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 1.680e-16 Identity = 48/75 (64.00%), Postives = 55/75 (73.33%), Query Frame = 2
Query: 821 LGEKFNQSLLGLGTWMPNLEAFRLLDQINYSRTPN-SLLRGIEWPKGLNQLTVLKESNLDGVVIPPTVQVVYRDN 1042
LG KF QSL GLGTWMPNLE+ RLL+ Y N SLLR IEWPKGL QLTV KES+L+ V IP V+V++R N
Sbjct: 25 LGHKFRQSLQGLGTWMPNLESLRLLEW--YVDLQNDSLLRRIEWPKGLLQLTVFKESSLEDVGIPAPVEVLHRYN 97 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig799.19292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig799.19292.1 >prot_Ecto-sp13_S_contig799.19292.1 ID=prot_Ecto-sp13_S_contig799.19292.1|Name=mRNA_Ecto-sp13_S_contig799.19292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp MPTEAELRNPISAMTDIDHLQFGRWFGGSLEAVAWPRRLKTIDMHESHFDback to top mRNA from alignment at Ecto-sp13_S_contig799:17293..19176+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig799.19292.1 ID=mRNA_Ecto-sp13_S_contig799.19292.1|Name=mRNA_Ecto-sp13_S_contig799.19292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1884bp|location=Sequence derived from alignment at Ecto-sp13_S_contig799:17293..19176+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig799:17293..19176+ >mRNA_Ecto-sp13_S_contig799.19292.1 ID=mRNA_Ecto-sp13_S_contig799.19292.1|Name=mRNA_Ecto-sp13_S_contig799.19292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=891bp|location=Sequence derived from alignment at Ecto-sp13_S_contig799:17293..19176+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |